Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g01180.t01
CDS Infomation

cds chromosome:12X:18:1792213:1803042:1 gene:VIT_18s0001g01180 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTAATAATGCAGCAGCATGTGTTGAAAGGGCAACGAGTGATATGTTGATTGGTCCA
GACTGGGCAATAAACATCGAGCTATGTGATATCATTAACATGGATCCTGGGCAAGCAAAG
GATGCCCTGAAGATACTCAAGAAGCGCCTGGGGAGTAAAAATCCTAAGATACAACTTCTT
GCTCTGTTTGTATTGGAGACTCTCAGCAAAAATTGCGGGGAGAATGTGTTTCAGCAGATT
GTTGAGCGTGATATCTTACATGAGATGGTCAAAATAGTAAAGAAGAAGCCAGACTTGAAT
GTAAGGGAAAAGATTCTAATTTTGATAGATACGTGGCAAGAAGCTTTTGGGGGACCTAGG
GGAAGATATCCCCAATACTATGCTGCATATAATGAACTGACGTCGGCTGGAGTAGAATTT
CCACCCCGAGCAGAGAACAGTGTCCCATTGTTTACTCCACCCCAAACCCAGCCAATAATT
CACCCTACTTCAGTCTACGATGATGCAGCTGTTCAAGCCTCTCTTCAGTCTGATTCTTCT
GGCCTCAGCTTGCTAGAGATGCAAAATGCTCAGGGACTCGCAGATGTATTAATGGAAATG
CTTGGTGCTGTGGATCCACGGAAGCCAGAGAGTGTGAAGGACGAAGTGATTGTTGACCTT
GTTGACCAGTGCCGCAATTACCAAAAGCGTGTCATGCTTCTTGTGAATGATACTGTAGAT
GAGGAACTTCTATGTCAGGGATTGGCATTGAATGATAACTTGCAGCGTGTGTTGCGCAAG
CATGATGATATAGCTAAAGGTGCTCCTGCTGTGGCAGTAGGAACAACAGAATCTTCTGCT
CCTGTACTTGTGAACGTGACTCATGAGGATGATGAATCAGAAGATGATTTTGCCCAGTTA
GCCCACAGGTCACAGGGCAGGAAATCAGCCAATGCAAAGCCTGAACCACTGCGAGTCAGC
CCACTTATTCCTCCTCCGCCCTCATCAAAGAAGCCAACTAGTGCAGATTCCAGCATGATT
GATTATCTCAGTGGTGATGTCTATAAGTCTAAGCCTGAAAGATCCCCTGAAACATCAGAA
CCCACGCCCTATGCTGTCCCATCGCATTCTAACAGTACAAACTCCACCTCTCCATGGACG
CCAGCATTATCTTCCTCATCCCCCCCCTCTCATTTCATAAATCCTACTGCATCACCCATG
TTCACTGCACATCCCGTGTATGATGAACCAGCTCCAATGTCAAAATCTGCCGATCCACTA
CCCTCTGCTCCTTGGGATGCCCCCTCTCCGAACAGCATTCCCCCCCCACCTTCCAAGTAT
AACCAGAGACAACAGTTCTTTGAGCAACAACATGCTTCTCTGGGAAGCCCATATTCAAGT
AGTGGATCCTCCTCTGACAGTTTAGTGGGACAGACCCAGAATCTGTCAATTAACTCCTCG
TCCACCACGAAACAAGTGAAGCAGGAGGATGCCCTGTTCAAAGATCTGGTTGATTTTGCA
AAAGCCAAGTCTTCTTCATCATCCAAGCCCAATAGATCATTTTGA

Peptide Sequence

PEP ID

VIT_18s0001g01180.t01
PEP Infomation

pep chromosome:12X:18:1792213:1803042:1 gene:VIT_18s0001g01180 transcript:VIT_18s0001g01180.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MANNAAACVERATSDMLIGPDWAINIELCDIINMDPGQAKDALKILKKRLGSKNPKIQLL
ALFVLETLSKNCGENVFQQIVERDILHEMVKIVKKKPDLNVREKILILIDTWQEAFGGPR
GRYPQYYAAYNELTSAGVEFPPRAENSVPLFTPPQTQPIIHPTSVYDDAAVQASLQSDSS
GLSLLEMQNAQGLADVLMEMLGAVDPRKPESVKDEVIVDLVDQCRNYQKRVMLLVNDTVD
EELLCQGLALNDNLQRVLRKHDDIAKGAPAVAVGTTESSAPVLVNVTHEDDESEDDFAQL
AHRSQGRKSANAKPEPLRVSPLIPPPPSSKKPTSADSSMIDYLSGDVYKSKPERSPETSE
PTPYAVPSHSNSTNSTSPWTPALSSSSPPSHFINPTASPMFTAHPVYDEPAPMSKSADPL
PSAPWDAPSPNSIPPPPSKYNQRQQFFEQQHASLGSPYSSSGSSSDSLVGQTQNLSINSS
STTKQVKQEDALFKDLVDFAKAKSSSSSKPNRSF

Transcript Sequence

Transcript ID

VIT_18s0001g01180.t01
Transcript Infomation

cdna chromosome:12X:18:1792213:1803042:1 gene:VIT_18s0001g01180 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTAGGAAAATCAACAGTGGGGGCTTTAGGAAAAGGGGCAGATAGAGATGGCTAATAATGC
AGCAGCATGTGTTGAAAGGGCAACGAGTGATATGTTGATTGGTCCAGACTGGGCAATAAA
CATCGAGCTATGTGATATCATTAACATGGATCCTGGGCAAGCAAAGGATGCCCTGAAGAT
ACTCAAGAAGCGCCTGGGGAGTAAAAATCCTAAGATACAACTTCTTGCTCTGTTTGTATT
GGAGACTCTCAGCAAAAATTGCGGGGAGAATGTGTTTCAGCAGATTGTTGAGCGTGATAT
CTTACATGAGATGGTCAAAATAGTAAAGAAGAAGCCAGACTTGAATGTAAGGGAAAAGAT
TCTAATTTTGATAGATACGTGGCAAGAAGCTTTTGGGGGACCTAGGGGAAGATATCCCCA
ATACTATGCTGCATATAATGAACTGACGTCGGCTGGAGTAGAATTTCCACCCCGAGCAGA
GAACAGTGTCCCATTGTTTACTCCACCCCAAACCCAGCCAATAATTCACCCTACTTCAGT
CTACGATGATGCAGCTGTTCAAGCCTCTCTTCAGTCTGATTCTTCTGGCCTCAGCTTGCT
AGAGATGCAAAATGCTCAGGGACTCGCAGATGTATTAATGGAAATGCTTGGTGCTGTGGA
TCCACGGAAGCCAGAGAGTGTGAAGGACGAAGTGATTGTTGACCTTGTTGACCAGTGCCG
CAATTACCAAAAGCGTGTCATGCTTCTTGTGAATGATACTGTAGATGAGGAACTTCTATG
TCAGGGATTGGCATTGAATGATAACTTGCAGCGTGTGTTGCGCAAGCATGATGATATAGC
TAAAGGTGCTCCTGCTGTGGCAGTAGGAACAACAGAATCTTCTGCTCCTGTACTTGTGAA
CGTGACTCATGAGGATGATGAATCAGAAGATGATTTTGCCCAGTTAGCCCACAGGTCACA
GGGCAGGAAATCAGCCAATGCAAAGCCTGAACCACTGCGAGTCAGCCCACTTATTCCTCC
TCCGCCCTCATCAAAGAAGCCAACTAGTGCAGATTCCAGCATGATTGATTATCTCAGTGG
TGATGTCTATAAGTCTAAGCCTGAAAGATCCCCTGAAACATCAGAACCCACGCCCTATGC
TGTCCCATCGCATTCTAACAGTACAAACTCCACCTCTCCATGGACGCCAGCATTATCTTC
CTCATCCCCCCCCTCTCATTTCATAAATCCTACTGCATCACCCATGTTCACTGCACATCC
CGTGTATGATGAACCAGCTCCAATGTCAAAATCTGCCGATCCACTACCCTCTGCTCCTTG
GGATGCCCCCTCTCCGAACAGCATTCCCCCCCCACCTTCCAAGTATAACCAGAGACAACA
GTTCTTTGAGCAACAACATGCTTCTCTGGGAAGCCCATATTCAAGTAGTGGATCCTCCTC
TGACAGTTTAGTGGGACAGACCCAGAATCTGTCAATTAACTCCTCGTCCACCACGAAACA
AGTGAAGCAGGAGGATGCCCTGTTCAAAGATCTGGTTGATTTTGCAAAAGCCAAGTCTTC
TTCATCATCCAAGCCCAATAGATCATTTTGAGTGGGCGGTTTGTGTGGCGAGCATGGATT
ATATATGGTGGTACAGTTTTATGAATACTGTTAGTTCCTCCGGATTTACATCAGATCATG
AGACTAGTTGTTATTGAATAAACATGGATGGGGAATTTGGTTTTAGGGTTTGCCCATGCT
GCTTAGCACTCTGCAGGTTACCTTTCGAGATTTGGGACATATTTCTGTTCATCTTCCACC
ATTCATTTGCTTGTGGCGCTGAGCCTGAGAGGAGTTGTTGGTGAACCCCATATTGGTATA
AATAGGAGTTTATGGGTGTATTATATGTGTTGTGTTTGATTATTAAATAGCGCCTGGTTG
AGGTTTCTGTTTGAATTGTTGGACCTTCCTTTCATTATTTTCACCTTTTCTTTTCTTTTC
TTTTCCTTTCCTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTCACCAGATTTGTATTTCT
CTCTATCAAACCTATATTTACCTTTAGTTAGGAACTTAGGAGACGAATCAGTTGTGTATT
TTCAGACATTATATTTT