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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g01130.t01
CDS Infomation

cds chromosome:12X:18:1778921:1780342:1 gene:VIT_18s0001g01130 gene_biotype:protein_coding transcript_biotype:protein_coding description:Expansin [Source:UniProtKB/TrEMBL;Acc:E0CQY0]
Sequence

ATGGCGAAAAATCTGCTTCATGCTTTAGCAATGGTGCGCGTAATTTGCTATTTTTTCTCG
AATGTTAATGCCTTTACTGCTTCTGGGTGGACTAAAGCTCACGCTACGTTTTATGGAGGC
AGTGATGCCTCTGGGACAATGGGAGGGGCTTGTGGATATGGAAACTTGTACTCTACTGGA
TATGGAACAAGAACGGCAGCTTTGAGCACAGCATTGTTCAATGATGGGGCTTCATGTGGG
CAATGCTACAAGATCATATGTGATTACCAATCCGATTCACAGTGGTGCAAGAAAGGAGCT
TCTGTGACCATCACTGCAACAAACTTTTGCCCTCCAAACTATGCTCTTCCAAGCAACAAT
GGAGGGTGGTGCAACCCACCCCTGCAGCATTTCGATATGGCTCAGCCAGCATGGGAAAAG
ATCGGTATTTACAGAGGCGGGATCGTCCCAGTGCTGTTCCAAAGGGTTCCATGTAAGAAG
CATGGTGGTGTTAGATTCAGTGTTAATGGAAGAGACTACTTCGAATTAGTATTGATAAGC
AATGTAGCTGGGGCTGGATCTATTCAATCAGTATCAATCAAAGGCTCCCGGACCAGTTGG
ATGGCCATGTCCAGGAACTGGGGAGCTAACTGGCAGTCTAATGCCTATCTCAATGGCCAG
TCTCTGTCCTTCAAGGTCACCACCACTGATGGAGTGACCCAAGAATTCGACAATGTTGTG
CCTTCAGATTGGGGGTTTGGTCAGACCTTCTCTAGCTCAGTACAGTTTTAA

Peptide Sequence

PEP ID

VIT_18s0001g01130.t01
PEP Infomation

pep chromosome:12X:18:1778921:1780342:1 gene:VIT_18s0001g01130 transcript:VIT_18s0001g01130.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Expansin [Source:UniProtKB/TrEMBL;Acc:E0CQY0]
Sequence

MAKNLLHALAMVRVICYFFSNVNAFTASGWTKAHATFYGGSDASGTMGGACGYGNLYSTG
YGTRTAALSTALFNDGASCGQCYKIICDYQSDSQWCKKGASVTITATNFCPPNYALPSNN
GGWCNPPLQHFDMAQPAWEKIGIYRGGIVPVLFQRVPCKKHGGVRFSVNGRDYFELVLIS
NVAGAGSIQSVSIKGSRTSWMAMSRNWGANWQSNAYLNGQSLSFKVTTTDGVTQEFDNVV
PSDWGFGQTFSSSVQF

Transcript Sequence

Transcript ID

VIT_18s0001g01130.t01
Transcript Infomation

cdna chromosome:12X:18:1778921:1780342:1 gene:VIT_18s0001g01130 gene_biotype:protein_coding transcript_biotype:protein_coding description:Expansin [Source:UniProtKB/TrEMBL;Acc:E0CQY0]
Sequence

AGTAAATGTGAAAATTGTCCCATTCCTCATCATCCTCCATCTTCCTCATTCTCCTTGATC
CTTGGTCTCCCCTGATACAGAAATGGCGAAAAATCTGCTTCATGCTTTAGCAATGGTGCG
CGTAATTTGCTATTTTTTCTCGAATGTTAATGCCTTTACTGCTTCTGGGTGGACTAAAGC
TCACGCTACGTTTTATGGAGGCAGTGATGCCTCTGGGACAATGGGAGGGGCTTGTGGATA
TGGAAACTTGTACTCTACTGGATATGGAACAAGAACGGCAGCTTTGAGCACAGCATTGTT
CAATGATGGGGCTTCATGTGGGCAATGCTACAAGATCATATGTGATTACCAATCCGATTC
ACAGTGGTGCAAGAAAGGAGCTTCTGTGACCATCACTGCAACAAACTTTTGCCCTCCAAA
CTATGCTCTTCCAAGCAACAATGGAGGGTGGTGCAACCCACCCCTGCAGCATTTCGATAT
GGCTCAGCCAGCATGGGAAAAGATCGGTATTTACAGAGGCGGGATCGTCCCAGTGCTGTT
CCAAAGGGTTCCATGTAAGAAGCATGGTGGTGTTAGATTCAGTGTTAATGGAAGAGACTA
CTTCGAATTAGTATTGATAAGCAATGTAGCTGGGGCTGGATCTATTCAATCAGTATCAAT
CAAAGGCTCCCGGACCAGTTGGATGGCCATGTCCAGGAACTGGGGAGCTAACTGGCAGTC
TAATGCCTATCTCAATGGCCAGTCTCTGTCCTTCAAGGTCACCACCACTGATGGAGTGAC
CCAAGAATTCGACAATGTTGTGCCTTCAGATTGGGGGTTTGGTCAGACCTTCTCTAGCTC
AGTACAGTTTTAAGCCAAGAAAGCTGCTTTGGGGTTCAGGGTTTCGGGTTTTCATTGGCA
GAGGCGTGCTTACTATTTTAATGAAGCAGCCCGCCCTAAATTATGAGAAGGAATTCTCAA
ATGGTTGGCAATGGAGATGGGGGCTAACCCATGAACTCAAGGCTACTATCAACTCCTTGT
GCCCATTTCTTCCACAGGGCCTGAAAACCAAATTATGGTGTCATTGTGTGTTGAAAATTT
TCGGGATCTTACTGAAAATCATGCACATCAGAAATAAGAAGCACATGCAGTTAAATTGCA
GCTTCAAATATATGAATAGTTCTTTTTTTCTTCATTTTACATATGCTTGTAATATCAATC
TTTATCAGCAAGGTTTGACCATTCCCAACTAATAAAGATCCCAGTAAATCATTTTTTTTT
GC