Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g01030.t01
CDS Infomation

cds chromosome:12X:18:1712005:1715268:-1 gene:VIT_18s0001g01030 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGGAAGGAGGTGAAGGAGACAACCAGCTTCAAGAGTGAAGATGGTTCGGGAGCTTTA
AACGGTGTTTCTGATGATTTAAACTATCGCTCTCGATTTTCTTCTCTCTTGGCCTCCACA
CACCGTGATTTTCTGCTCTCTCCCACCGGACAACAGGTTAAAGTGTCGGAGCTGAATGAC
AAGGTTATTGGGCTTTACTTCTCAGCCAACTGGTACGCACCATGTAGGAAATTCACCCAA
GTCCTGGCCGGCGCCTATGAGCAACTCAAGAGCTGTGGCGCTGGCTTTGAGATAGTGTTC
GTATCGTCTGACGAAGATTCGGACGCTTTCGACAATTTTCGAGCGTGCATGCCATGGCTT
GCAGTTCCGTTTTCTGATTTGGAGACAAAGAAAGCCTTGAACCGGAAGTTTGACATTGAA
GGTATTCCTTGCTTAGTTATATTGCAACCTAATGATAATAAGGATGAAGCAACATTGCAC
GATGGGGTTGAACTCATTTATCGGTATGGGGTCAATGCATTTCCATTCACTAAAGTGAGG
TTGGAGGAATTGCGTAAGGAAGAGAGGGAGAAGCATGAGAGCCAAACCCTACCCAATTTA
CTAACAAACCACAATAGAGACTTTCTCTTGGGTCGTCCCACAGCTAAACAGGTGCCTATT
TCTTCTTTAATAGGCAAGACAATCGGACTCTACTTCTCAGCTCAATGGTGTCTTCCAGGC
GTGAAGTTCACTCCCAAACTGATTTCCATCTACCAGAAGATAAAGCAAACGCTGGTGGAT
GACAACGAGGAGGATTTCGAAATAGTTTTCGTGTCAAGTGACCGTGACCAACCTTCATTC
GACTCCTACTTTGGCACCATGCCATGGCTAGCAGTGCCCTTTGGAGACCCAACCATCAAA
ACCCTCACCAAGTACTTCGATGTTCAGGGAATTCCCTGTTTGGTCATTCTGGGCCCGGAC
GGTAAAACCGTGACAAAGCAAGGGAGGTACCTTATAAATCTGTACCAAGAAAACGCCTAC
CCTTTCACCGAGGCTAAATTGGAGCTGCTAGAGAAGCAAATGGACGAAGAGGCTAAGAGC
CTTCCTCGTTCGGAGTACCACGCAGGGCACCGCCACGAGCTCACTCTGGTGTCCGAAGGC
ACAGGAGGCGGACCCTTTATCTGCTGTGACTGCGACGAGCAAGGCTTGGGGTGGGCGTAC
CAATGCCTTGAATGTGGGTATGAGGTGCACCCCAAGTGCATGAGAGTTGTGGACCGTGGC
TCCACTCTGGAAAGGTGA

Peptide Sequence

PEP ID

VIT_18s0001g01030.t01
PEP Infomation

pep chromosome:12X:18:1712005:1715268:-1 gene:VIT_18s0001g01030 transcript:VIT_18s0001g01030.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MRKEVKETTSFKSEDGSGALNGVSDDLNYRSRFSSLLASTHRDFLLSPTGQQVKVSELND
KVIGLYFSANWYAPCRKFTQVLAGAYEQLKSCGAGFEIVFVSSDEDSDAFDNFRACMPWL
AVPFSDLETKKALNRKFDIEGIPCLVILQPNDNKDEATLHDGVELIYRYGVNAFPFTKVR
LEELRKEEREKHESQTLPNLLTNHNRDFLLGRPTAKQVPISSLIGKTIGLYFSAQWCLPG
VKFTPKLISIYQKIKQTLVDDNEEDFEIVFVSSDRDQPSFDSYFGTMPWLAVPFGDPTIK
TLTKYFDVQGIPCLVILGPDGKTVTKQGRYLINLYQENAYPFTEAKLELLEKQMDEEAKS
LPRSEYHAGHRHELTLVSEGTGGGPFICCDCDEQGLGWAYQCLECGYEVHPKCMRVVDRG
STLER

Transcript Sequence

Transcript ID

VIT_18s0001g01030.t01
Transcript Infomation

cdna chromosome:12X:18:1712005:1715268:-1 gene:VIT_18s0001g01030 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GAGGAATATAAGCGTTGGAAGGATGGTGGAAAGAGCTGTTTTCATCTGTAGCAGAGGGAG
AAATTGATATCGAAAGAAAGAGAGAGAGGGAGAGATGAGGAAGGAGGTGAAGGAGACAAC
CAGCTTCAAGAGTGAAGATGGTTCGGGAGCTTTAAACGGTGTTTCTGATGATTTAAACTA
TCGCTCTCGATTTTCTTCTCTCTTGGCCTCCACACACCGTGATTTTCTGCTCTCTCCCAC
CGGACAACAGGTTAAAGTGTCGGAGCTGAATGACAAGGTTATTGGGCTTTACTTCTCAGC
CAACTGGTACGCACCATGTAGGAAATTCACCCAAGTCCTGGCCGGCGCCTATGAGCAACT
CAAGAGCTGTGGCGCTGGCTTTGAGATAGTGTTCGTATCGTCTGACGAAGATTCGGACGC
TTTCGACAATTTTCGAGCGTGCATGCCATGGCTTGCAGTTCCGTTTTCTGATTTGGAGAC
AAAGAAAGCCTTGAACCGGAAGTTTGACATTGAAGGTATTCCTTGCTTAGTTATATTGCA
ACCTAATGATAATAAGGATGAAGCAACATTGCACGATGGGGTTGAACTCATTTATCGGTA
TGGGGTCAATGCATTTCCATTCACTAAAGTGAGGTTGGAGGAATTGCGTAAGGAAGAGAG
GGAGAAGCATGAGAGCCAAACCCTACCCAATTTACTAACAAACCACAATAGAGACTTTCT
CTTGGGTCGTCCCACAGCTAAACAGGTGCCTATTTCTTCTTTAATAGGCAAGACAATCGG
ACTCTACTTCTCAGCTCAATGGTGTCTTCCAGGCGTGAAGTTCACTCCCAAACTGATTTC
CATCTACCAGAAGATAAAGCAAACGCTGGTGGATGACAACGAGGAGGATTTCGAAATAGT
TTTCGTGTCAAGTGACCGTGACCAACCTTCATTCGACTCCTACTTTGGCACCATGCCATG
GCTAGCAGTGCCCTTTGGAGACCCAACCATCAAAACCCTCACCAAGTACTTCGATGTTCA
GGGAATTCCCTGTTTGGTCATTCTGGGCCCGGACGGTAAAACCGTGACAAAGCAAGGGAG
GTACCTTATAAATCTGTACCAAGAAAACGCCTACCCTTTCACCGAGGCTAAATTGGAGCT
GCTAGAGAAGCAAATGGACGAAGAGGCTAAGAGCCTTCCTCGTTCGGAGTACCACGCAGG
GCACCGCCACGAGCTCACTCTGGTGTCCGAAGGCACAGGAGGCGGACCCTTTATCTGCTG
TGACTGCGACGAGCAAGGCTTGGGGTGGGCGTACCAATGCCTTGAATGTGGGTATGAGGT
GCACCCCAAGTGCATGAGAGTTGTGGACCGTGGCTCCACTCTGGAAAGGTGATGGGGCTC
TAGTTGTGCTGCTAATCAAATTGGGGGTGCTGTGCATTTGTGGCTGTGGGGTTCCTTTTG
TTAATTATAATAGGTTTGGTTTCTCCGCTTTTCATCAACTGTGTGGGTTATAACTAGGAA
TGTTCCTTATACTGGCCTAATGGATGTCAATGAAAGCTGATGAAATGTTTAAAAATTACC
CCTTCAATTAAAAAATATTATACTATGTAACAAAG