Gene sequences

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Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_18s0001g00960.t01
CDS Infomation	cds chromosome:12X:18:1677718:1683511:-1 gene:VIT_18s0001g00960 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pseudouridine synthase [Source:UniProtKB/TrEMBL;Acc:E0CQW6]
Sequence	ATGATCTTCTCACTTAACTCCGCTTCTTTTTTCTCTATTTCCCACACTTCACAGTCTGCA CTTCTCTTCCCTCGAAACCCTAAATCGTGCTCTAGGGTTTTCAGAATCCTTAGAGCTTGC TCTAATTCCACCGACGAACCTCTCGTATCTGTTTCCGGCCGGAGAACTAATTACGCAGGA GTTCGATTGGAGGAGACCGTTGTCGATGTCAATTCCGATTCAGGAAAGCTGAGGCTGGAT TCTTGGATTTCTTCTCGCATAATCGGTATAAGTAGGGCTAGAGTGCAATCGAGCATTCGG TCGGGGCTTGTAAGCGTTAATGACAGGATTGTCGATAAGGTTTCCCATGTTATCAGAGCT GGGGACAAGGTTAATTGCACAATATCGGAGTTGCAACCCTTAAGGGCTGAACCAGAGGAT ATACCTTTAGATATAGTTTATGAAGATGAACATGTACTGGTGGTCAACAAACCTGCACAC ATGGTTGTTCATCCTGCACCTGGCAATGCTAGTGGCACACTTGTAAATGGTATTCTTCAC CATTGCAGTCTTCCCACAGTTGCATTGCCAAACAGGGACTCTGAGGAAGATGATATTTCG GATGATGAGTTCAATAGTTTTGCTGCAGGCCAGAATTGTGGCACATGTGAAACTAATATT CGCCCTGGAATTGTGCACAGATTAGACAAAGGCACCAGTGGATTGCTTGTTGTTGCGAAG GATGAACATTCTCATGCCCATTTATCTGAACAGTTCAAGCTACACTCCATCCACAGAGTA TACATTAGTCTTACGTCTGGAGTACCCACTCCACTTTCTGGACGAGTGGAGATCCCAGTA GGTCGTGATCCAAATAATCGAATTCGCATGACTGCTGTTCCTGGACCTAGTAACTCTGGA CAGGCCCGTCATGCTGCTAGTAGGTATAAAGTTATTGAAATACTTGCTGCTGGTGGTTCT GCATTGGTTGAGTGGAGATTAGAAACTGGGCGTACTCATCAGATTCGTGCACATGCCAAG TACCTGGGAATCCCTCTACTAGGAGATGAGGTCTATGGAGGAACTAAGAACATGGCCTTG TCTCTGCTTCGGCCCAGAATCCCATCTAGCCATCATGGTCAACTGGCACAGCTGGTTTCG AGATTGGATAGGCCTTGCCTCCATGCTGTGGCTCTTGGGTTTAACCATCCAAAAACAGGG AAGAACGTACACTTTTCTTGCCAACCTCCTGAAGATTTTGCTGAGATTTTGAGTTGGCTT CGTAAAATTAGCACAGAGAAGAAAAAAGGTCTGATATTGTAG

Peptide Sequence

PEP ID	VIT_18s0001g00960.t01
PEP Infomation	pep chromosome:12X:18:1677718:1683511:-1 gene:VIT_18s0001g00960 transcript:VIT_18s0001g00960.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pseudouridine synthase [Source:UniProtKB/TrEMBL;Acc:E0CQW6]
Sequence	MIFSLNSASFFSISHTSQSALLFPRNPKSCSRVFRILRACSNSTDEPLVSVSGRRTNYAG VRLEETVVDVNSDSGKLRLDSWISSRIIGISRARVQSSIRSGLVSVNDRIVDKVSHVIRA GDKVNCTISELQPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNASGTLVNGILH HCSLPTVALPNRDSEEDDISDDEFNSFAAGQNCGTCETNIRPGIVHRLDKGTSGLLVVAK DEHSHAHLSEQFKLHSIHRVYISLTSGVPTPLSGRVEIPVGRDPNNRIRMTAVPGPSNSG QARHAASRYKVIEILAAGGSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTKNMAL SLLRPRIPSSHHGQLAQLVSRLDRPCLHAVALGFNHPKTGKNVHFSCQPPEDFAEILSWL RKISTEKKKGLIL

Transcript Sequence

Transcript ID	VIT_18s0001g00960.t01
Transcript Infomation	cdna chromosome:12X:18:1677718:1683511:-1 gene:VIT_18s0001g00960 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pseudouridine synthase [Source:UniProtKB/TrEMBL;Acc:E0CQW6]
Sequence	ATGATCTTCTCACTTAACTCCGCTTCTTTTTTCTCTATTTCCCACACTTCACAGTCTGCA CTTCTCTTCCCTCGAAACCCTAAATCGTGCTCTAGGGTTTTCAGAATCCTTAGAGCTTGC TCTAATTCCACCGACGAACCTCTCGTATCTGTTTCCGGCCGGAGAACTAATTACGCAGGA GTTCGATTGGAGGAGACCGTTGTCGATGTCAATTCCGATTCAGGAAAGCTGAGGCTGGAT TCTTGGATTTCTTCTCGCATAATCGGTATAAGTAGGGCTAGAGTGCAATCGAGCATTCGG TCGGGGCTTGTAAGCGTTAATGACAGGATTGTCGATAAGGTTTCCCATGTTATCAGAGCT GGGGACAAGGTTAATTGCACAATATCGGAGTTGCAACCCTTAAGGGCTGAACCAGAGGAT ATACCTTTAGATATAGTTTATGAAGATGAACATGTACTGGTGGTCAACAAACCTGCACAC ATGGTTGTTCATCCTGCACCTGGCAATGCTAGTGGCACACTTGTAAATGGTATTCTTCAC CATTGCAGTCTTCCCACAGTTGCATTGCCAAACAGGGACTCTGAGGAAGATGATATTTCG GATGATGAGTTCAATAGTTTTGCTGCAGGCCAGAATTGTGGCACATGTGAAACTAATATT CGCCCTGGAATTGTGCACAGATTAGACAAAGGCACCAGTGGATTGCTTGTTGTTGCGAAG GATGAACATTCTCATGCCCATTTATCTGAACAGTTCAAGCTACACTCCATCCACAGAGTA TACATTAGTCTTACGTCTGGAGTACCCACTCCACTTTCTGGACGAGTGGAGATCCCAGTA GGTCGTGATCCAAATAATCGAATTCGCATGACTGCTGTTCCTGGACCTAGTAACTCTGGA CAGGCCCGTCATGCTGCTAGTAGGTATAAAGTTATTGAAATACTTGCTGCTGGTGGTTCT GCATTGGTTGAGTGGAGATTAGAAACTGGGCGTACTCATCAGATTCGTGCACATGCCAAG TACCTGGGAATCCCTCTACTAGGAGATGAGGTCTATGGAGGAACTAAGAACATGGCCTTG TCTCTGCTTCGGCCCAGAATCCCATCTAGCCATCATGGTCAACTGGCACAGCTGGTTTCG AGATTGGATAGGCCTTGCCTCCATGCTGTGGCTCTTGGGTTTAACCATCCAAAAACAGGG AAGAACGTACACTTTTCTTGCCAACCTCCTGAAGATTTTGCTGAGATTTTGAGTTGGCTT CGTAAAATTAGCACAGAGAAGAAAAAAGGTCTGATATTGTAGCTTCTCCACCCATGGCGT CACCAAAGTGTTGTGTGATCATGTGGACAAAGAGGGGTAGGATATCTGTGATTTCGTTAC CTTATCTACTACCCCTATCATGCATTCCCAACCCCAATCTCACCTGTTGTCTGGATATTC CAGTAGATTCTACTATCAAGGGAATTAAATATCAGGAAAAAATGCATTGACACAAAAGAA CCAGGACTTGGGATGTGGGAGATTCTTGCTGCCAGAGTGTCTTTTAATTAAATCATAGCT GGCGGAGATTCTAGTTCTTTATTTATTTATTTTTTCTTCTTTAATATATGTATCACAATA AGAAATTATAGGGCGCTATGCAGTCATATGATGTTTTCAGCTGTCCATTCTATATGAACT GATGATGTTCATTATGCATTTTACTCGGTGAATTTAAGGCCCTTTTGTGGGGAATAAAAG CTGTGTCTCAATCTTATTACCTAA