Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g00890.t01
CDS Infomation

cds chromosome:12X:18:1619182:1620812:-1 gene:VIT_18s0001g00890 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGTTGGTCAAGTCAAAGGTGCGTTTGTCTCTTTTACGATATAGTCTCTCTCCTGTT
TCTCAGCATAGCTTTAGACTCTATTCTTCTTCTTCGGAAGCCTCCGAAGAAGAAGATGAA
GTAAAGGAGAGTGGTAACAGTGCTGTTAATATCGTATTATCTTCTGAAGAAACCCTAGTT
GTGGAAAAGTTTCATTCTCTGATCAAAAGCCACCAACGAAAAAACACTAACCCTGATCCT
ATCTCTCCAAATCCTCACTATACTATTGCTAGTCTGAGTTTCGATTTTTCCCAAATCTCC
TCCGCGGATTCTGTCTCCTCCGCCATCGTCCGCCGCGTGATTGAGAAATGTGGTGGTGTC
CGCCACGGCATTCCCTTTCCCCAAACACTAGCGTTCTTCAACTGGGCGACGAACCTTGAA
GAGTTTGGGCACTCTCCCGAACCCTACATGGAGATGATTGATCTAGCCGGGAAGGTACGG
CAATTCGATTTGGCGTGGCAGTTGATTGATTTGATGAAAACGCGAAACGTAGAAATCCCG
GTTGAGACGTTCACCATCCTTGTTCGGCGGTATGTGAAGGCTGGATTGGCTGCAGAAGCG
GTCCATGCGTTTAATCGTATGGAGGACTATGGCTGCAAACCTGATAAGATTGCATTTTCT
GTTGTGATTAGTAGTCTATCTAAGAAGAGAAGGGCAATTGAGGCTCAGTCCTTTTTTGAT
AGTTTGAAGGATAGATTCGAGCCTGATGTGGTTGTGTACACTAGCTTGGTTCATGGGTGG
TGCCGAGCAGGCAACATTTCAGAAGCAGAGAGGGTTTTTGGGGAAATGAAGATGGCTGGA
ATTCAGCCCAATGTGTATACTTACAGTATTGTGATTGATGCATTGTGTAGAAGTGGACAA
ATTACGCGTGCCCATGATGTTTTTTCAGAGATGATTGATGTAGGGTGTGATCCAAATGCT
ATCACTTTCAACAACCTAATGCGGGTTCATGTCAAGGCAGGTCGAACGGAGAAGGTTTTA
CAAGTTTATAATCAGATGAAGAGGCTTGGATGCCCTCCTGATGCCATCACATACAATTTT
CTCATCGAGAGTCATTGCAGAGATGACAATCTTGAAGAAGCTGTTAAGATTCTTAATTCA
GTTAAGAAAGGGTGTAACCTAAATGCATCATCTTTCAATCCGATCTTTGGATGCATTTCA
AAGTTGGGGGATGTCAATAGTGCCCACCGCATGTTTGCTAAGATGAAGGATTTGAAATGT
AGACCCAATACAGTGACATACAATATATTGATGCGGATGTTTGCTGACAAAAAATCAACC
GACATGGTTCTCAAGCTCAGGAAAGAAATGGATGAAAATGAAATTGAGCCTAATGCGAAT
ACTTACCGGGTCCTAATTTCAACTTTCTGTGGAATTGGGCATTGGAACAATGCATACTCG
TTCTTTAAGGAGATGATTGAGGAGAAATGCTTGAGACCAAGTCTGCCAGTTTATGAGATG
GTGCTTCAGCAGCTGAGGAAGGCAGGGCAGCTAAAGAAGCATGAGGAATTGGTGGAGAAG
ATGGTGAATAGGGGATTTGTTACTCGGCCTCTATAG

Peptide Sequence

PEP ID

VIT_18s0001g00890.t01
PEP Infomation

pep chromosome:12X:18:1619182:1620812:-1 gene:VIT_18s0001g00890 transcript:VIT_18s0001g00890.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MALVKSKVRLSLLRYSLSPVSQHSFRLYSSSSEASEEEDEVKESGNSAVNIVLSSEETLV
VEKFHSLIKSHQRKNTNPDPISPNPHYTIASLSFDFSQISSADSVSSAIVRRVIEKCGGV
RHGIPFPQTLAFFNWATNLEEFGHSPEPYMEMIDLAGKVRQFDLAWQLIDLMKTRNVEIP
VETFTILVRRYVKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFD
SLKDRFEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVIDALCRSGQ
ITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNF
LIESHCRDDNLEEAVKILNSVKKGCNLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLKC
RPNTVTYNILMRMFADKKSTDMVLKLRKEMDENEIEPNANTYRVLISTFCGIGHWNNAYS
FFKEMIEEKCLRPSLPVYEMVLQQLRKAGQLKKHEELVEKMVNRGFVTRPL

Transcript Sequence

Transcript ID

VIT_18s0001g00890.t01
Transcript Infomation

cdna chromosome:12X:18:1619182:1620812:-1 gene:VIT_18s0001g00890 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGTTGGTCAAGTCAAAGGTGCGTTTGTCTCTTTTACGATATAGTCTCTCTCCTGTT
TCTCAGCATAGCTTTAGACTCTATTCTTCTTCTTCGGAAGCCTCCGAAGAAGAAGATGAA
GTAAAGGAGAGTGGTAACAGTGCTGTTAATATCGTATTATCTTCTGAAGAAACCCTAGTT
GTGGAAAAGTTTCATTCTCTGATCAAAAGCCACCAACGAAAAAACACTAACCCTGATCCT
ATCTCTCCAAATCCTCACTATACTATTGCTAGTCTGAGTTTCGATTTTTCCCAAATCTCC
TCCGCGGATTCTGTCTCCTCCGCCATCGTCCGCCGCGTGATTGAGAAATGTGGTGGTGTC
CGCCACGGCATTCCCTTTCCCCAAACACTAGCGTTCTTCAACTGGGCGACGAACCTTGAA
GAGTTTGGGCACTCTCCCGAACCCTACATGGAGATGATTGATCTAGCCGGGAAGGTACGG
CAATTCGATTTGGCGTGGCAGTTGATTGATTTGATGAAAACGCGAAACGTAGAAATCCCG
GTTGAGACGTTCACCATCCTTGTTCGGCGGTATGTGAAGGCTGGATTGGCTGCAGAAGCG
GTCCATGCGTTTAATCGTATGGAGGACTATGGCTGCAAACCTGATAAGATTGCATTTTCT
GTTGTGATTAGTAGTCTATCTAAGAAGAGAAGGGCAATTGAGGCTCAGTCCTTTTTTGAT
AGTTTGAAGGATAGATTCGAGCCTGATGTGGTTGTGTACACTAGCTTGGTTCATGGGTGG
TGCCGAGCAGGCAACATTTCAGAAGCAGAGAGGGTTTTTGGGGAAATGAAGATGGCTGGA
ATTCAGCCCAATGTGTATACTTACAGTATTGTGATTGATGCATTGTGTAGAAGTGGACAA
ATTACGCGTGCCCATGATGTTTTTTCAGAGATGATTGATGTAGGGTGTGATCCAAATGCT
ATCACTTTCAACAACCTAATGCGGGTTCATGTCAAGGCAGGTCGAACGGAGAAGGTTTTA
CAAGTTTATAATCAGATGAAGAGGCTTGGATGCCCTCCTGATGCCATCACATACAATTTT
CTCATCGAGAGTCATTGCAGAGATGACAATCTTGAAGAAGCTGTTAAGATTCTTAATTCA
GTTAAGAAAGGGTGTAACCTAAATGCATCATCTTTCAATCCGATCTTTGGATGCATTTCA
AAGTTGGGGGATGTCAATAGTGCCCACCGCATGTTTGCTAAGATGAAGGATTTGAAATGT
AGACCCAATACAGTGACATACAATATATTGATGCGGATGTTTGCTGACAAAAAATCAACC
GACATGGTTCTCAAGCTCAGGAAAGAAATGGATGAAAATGAAATTGAGCCTAATGCGAAT
ACTTACCGGGTCCTAATTTCAACTTTCTGTGGAATTGGGCATTGGAACAATGCATACTCG
TTCTTTAAGGAGATGATTGAGGAGAAATGCTTGAGACCAAGTCTGCCAGTTTATGAGATG
GTGCTTCAGCAGCTGAGGAAGGCAGGGCAGCTAAAGAAGCATGAGGAATTGGTGGAGAAG
ATGGTGAATAGGGGATTTGTTACTCGGCCTCTATAGGAGTAGCTTATGCATCTATGAATT
AAATTAGGTAA