Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g00590.t01
CDS Infomation

cds chromosome:12X:18_random:1435268:1437180:1 gene:VIT_18s0001g00590 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGTTCTCTTTCAAGTCTGAGTACACAAACTGGTGGGTTTTTACACTTCCAGCTCTT
GTGGAAACCCAAAACTTATCCAAGGGTTTGATTTTGCTTTTCATTCTCATTGTATTTCTC
TCCATTGGACTTCTAAGCTGGGCATTTTCTGCGGGAGGTGCAGCTTGGAAAAATGGAAGA
AACCAGATGGGTCGGGTCTCAATCCCAGGTCCGCGAGGTATTCCCATTTTTGGTAGCTTA
TTCAGCTTAAGCCATGGGTTGGCTCATCGTACACTTGCCTCCATGGCTTTGAGCAGCGCT
GCCACTCAGCTCATGGCCTTCAGCCTCGGCTCAACCCCTACAGTAGTTTCTTCCGAGCCT
TGCACTGCTAGGGAGATATTGACCTCACCTCAATTCGCTGACCGCCCCATCAAACAGTCA
GTTAAGAGCCTTATGTTCAGCCGAGCCATCGGGTTTGCACCTAATGGGGCTTACTGGAGG
CTACTGAGAAGAATATCATCGTCTCACCTCTTCGCGCCAAAGCGCATAGCAGCTCACGAA
GGTGGACGGCAGCTGGACTGCACCGCCATGTTACAGTCCATTGCAAAAGAACAATCAGCA
AATGGGGCTGTTGTTCTGCGGAAGCACCTTCAAGCTGCTGCCCTCAACAATATAATGGGG
ACAGTTTTCGGAAAAAGGCTTAATCCAGTGGAAGATAGAATGGAGGCTAGAGAATTGCAT
GAGATTGTCAAAGAAGGCTTCGAGCTTTTGGGAGCTTTCAACTGGTCCGATCATCTGCCG
TGGCTGAACTACTTTTATGACCCTTTCGGTATCAACCAGCGTTGCTCCGCTCTTGTTCCT
CGAGTCAGAAAACTCGTCAAAGGGATTATTAAAGAACACCAACTCAGTGGTTCCAACAAG
CTCTCAGATAAGTCAGATTTCGTAGATGTTTTGCTGTCTCTGGATGGTGAAGAGAAGCTT
GAAGAGGAAGATATGGTGGCCGTTTTATGGGAAATGATCTTCAGAGGTACTGATACAACG
GCGCTCTTAACTGAGTGGGTCATGGCTGAGTTAATCCTGAACCCCAAGGTTCAAGCCAAG
CTTCACGAGGAGCTCCATCTCACTACTCTAGGAAACAAGGCCATCACCGACGCTAACGTG
GCTAAATTGCCCTATCTTCAAGCTGTGATCAAGGAGACCCTACGTGTCCACCCACCTGGG
CCTCTCCTCTCATGGGCCCGCCTGTCCACGTCAGACGTCCACCTCAGCAATGGCATGGTG
ATCCCTTCCAACACCACTGCAATGGTCAACATGTGGGCCATCACACATGATCCAAATCTC
TGGAAAGACCCTCTGGCCTTCAAGCCAGAGAGGTTTTTACCCTCTGCTGGCGGTGCTGAC
GTGGACGTGAGAGGCTGTGACTTGCGGCTCGCCCCGTTCGGGGCTGGTCGTAGGGTTTGT
CCAGGGAAGAACCTAGGGCTGGTGACAGTGAGCCTTTGGGTGGCTAAGTTGGTGCACCAT
TTCGACTGGGTTCAGGACATGGCTCAGCCGGTTGACCTGAGTGAGGTGCTGAAGCTGTCA
TGTGAAATGAAGAACCCTCTCTCTGCTGTGCCTGTTCCCAGGAGTGGTGCAATTCATATA
TAA

Peptide Sequence

PEP ID

VIT_18s0001g00590.t01
PEP Infomation

pep chromosome:12X:18_random:1435268:1437180:1 gene:VIT_18s0001g00590 transcript:VIT_18s0001g00590.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEFSFKSEYTNWWVFTLPALVETQNLSKGLILLFILIVFLSIGLLSWAFSAGGAAWKNGR
NQMGRVSIPGPRGIPIFGSLFSLSHGLAHRTLASMALSSAATQLMAFSLGSTPTVVSSEP
CTAREILTSPQFADRPIKQSVKSLMFSRAIGFAPNGAYWRLLRRISSSHLFAPKRIAAHE
GGRQLDCTAMLQSIAKEQSANGAVVLRKHLQAAALNNIMGTVFGKRLNPVEDRMEARELH
EIVKEGFELLGAFNWSDHLPWLNYFYDPFGINQRCSALVPRVRKLVKGIIKEHQLSGSNK
LSDKSDFVDVLLSLDGEEKLEEEDMVAVLWEMIFRGTDTTALLTEWVMAELILNPKVQAK
LHEELHLTTLGNKAITDANVAKLPYLQAVIKETLRVHPPGPLLSWARLSTSDVHLSNGMV
IPSNTTAMVNMWAITHDPNLWKDPLAFKPERFLPSAGGADVDVRGCDLRLAPFGAGRRVC
PGKNLGLVTVSLWVAKLVHHFDWVQDMAQPVDLSEVLKLSCEMKNPLSAVPVPRSGAIHI

Transcript Sequence

Transcript ID

VIT_18s0001g00590.t01
Transcript Infomation

cdna chromosome:12X:18_random:1435268:1437180:1 gene:VIT_18s0001g00590 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGTTCTCTTTCAAGTCTGAGTACACAAACTGGTGGGTTTTTACACTTCCAGCTCTT
GTGGAAACCCAAAACTTATCCAAGGGTTTGATTTTGCTTTTCATTCTCATTGTATTTCTC
TCCATTGGACTTCTAAGCTGGGCATTTTCTGCGGGAGGTGCAGCTTGGAAAAATGGAAGA
AACCAGATGGGTCGGGTCTCAATCCCAGGTCCGCGAGGTATTCCCATTTTTGGTAGCTTA
TTCAGCTTAAGCCATGGGTTGGCTCATCGTACACTTGCCTCCATGGCTTTGAGCAGCGCT
GCCACTCAGCTCATGGCCTTCAGCCTCGGCTCAACCCCTACAGTAGTTTCTTCCGAGCCT
TGCACTGCTAGGGAGATATTGACCTCACCTCAATTCGCTGACCGCCCCATCAAACAGTCA
GTTAAGAGCCTTATGTTCAGCCGAGCCATCGGGTTTGCACCTAATGGGGCTTACTGGAGG
CTACTGAGAAGAATATCATCGTCTCACCTCTTCGCGCCAAAGCGCATAGCAGCTCACGAA
GGTGGACGGCAGCTGGACTGCACCGCCATGTTACAGTCCATTGCAAAAGAACAATCAGCA
AATGGGGCTGTTGTTCTGCGGAAGCACCTTCAAGCTGCTGCCCTCAACAATATAATGGGG
ACAGTTTTCGGAAAAAGGCTTAATCCAGTGGAAGATAGAATGGAGGCTAGAGAATTGCAT
GAGATTGTCAAAGAAGGCTTCGAGCTTTTGGGAGCTTTCAACTGGTCCGATCATCTGCCG
TGGCTGAACTACTTTTATGACCCTTTCGGTATCAACCAGCGTTGCTCCGCTCTTGTTCCT
CGAGTCAGAAAACTCGTCAAAGGGATTATTAAAGAACACCAACTCAGTGGTTCCAACAAG
CTCTCAGATAAGTCAGATTTCGTAGATGTTTTGCTGTCTCTGGATGGTGAAGAGAAGCTT
GAAGAGGAAGATATGGTGGCCGTTTTATGGGAAATGATCTTCAGAGGTACTGATACAACG
GCGCTCTTAACTGAGTGGGTCATGGCTGAGTTAATCCTGAACCCCAAGGTTCAAGCCAAG
CTTCACGAGGAGCTCCATCTCACTACTCTAGGAAACAAGGCCATCACCGACGCTAACGTG
GCTAAATTGCCCTATCTTCAAGCTGTGATCAAGGAGACCCTACGTGTCCACCCACCTGGG
CCTCTCCTCTCATGGGCCCGCCTGTCCACGTCAGACGTCCACCTCAGCAATGGCATGGTG
ATCCCTTCCAACACCACTGCAATGGTCAACATGTGGGCCATCACACATGATCCAAATCTC
TGGAAAGACCCTCTGGCCTTCAAGCCAGAGAGGTTTTTACCCTCTGCTGGCGGTGCTGAC
GTGGACGTGAGAGGCTGTGACTTGCGGCTCGCCCCGTTCGGGGCTGGTCGTAGGGTTTGT
CCAGGGAAGAACCTAGGGCTGGTGACAGTGAGCCTTTGGGTGGCTAAGTTGGTGCACCAT
TTCGACTGGGTTCAGGACATGGCTCAGCCGGTTGACCTGAGTGAGGTGCTGAAGCTGTCA
TGTGAAATGAAGAACCCTCTCTCTGCTGTGCCTGTTCCCAGGAGTGGTGCAATTCATATA
TAA