Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g00480.t01
CDS Infomation

cds chromosome:12X:18:1358106:1364569:-1 gene:VIT_18s0001g00480 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGATCGACAATCTTTTTAAAGATGATGCGACTGAAGAAAAGGGGGAGAGAGCCAGA
ATGGCGTCCTTTATTGGAGCAATGGCGATTGCTGACCTGGTTAAGACAACCTTAGGGCCA
AAGGGAATGGATAAAATTTTGCAATCAACAGGCAGAGGCCGCAGTGTTACTGTTACAAAT
GATGGTGCTACCATCTTAAAGTCCCTTCATATTGACAACCCAGCTGCTAAAGTCCTTGTT
GGGACAGATATATCCAAAGTTCAAGATGATGAGGTTGGTGATGGGACCACTTCAGTTGTT
GTTTTGGCTGGAGAGCTTTTAAGAGAAGCAGAGAAGTTGGTGGCAGCAAAAATTCATCCC
ATGACAATAATTTCAGGTTATCGGATGGCTGCCGAATGTGCTCGGAATGCTTTGTTACAG
AAAGTCATGGATAATAAAGAGGATGCAGAAAAGTTCAAGTTAGACTTGATGAAGATTGCA
ATGACTACTTTGAGTTCAAAAATTCTTTCCCAGGACAAGGAACATTTTGCAAAACTGGCA
GTAGATGCTGTTATGAGACTGAAGGGCAGCACAAACTTGGAGTCTATTCAAATTATTAAG
AAGCCTGGAGGATCACTCAAAGACTCATTTTTGGATGAAGGGTTTATTCTTGACAAGAAG
ATAGGCATTGGTCAACCAAAACGCATAGAGAATGCAAAGATTTTGGTGGCAAATACTGCA
ATGGACACCGATAAAGTCAAGATTTATGGGGCACGTGTCCGTGTTGACTCAATGTCTAGG
GTTGCCCAGATTGAAGGGGCTGAAAAGGAGAAAATGAGAGAAAAAGTTCAGAAGATTATA
GGTCATGGGATTAACTGCTTTGTTAACAGACAGTTGATTTACAATTTCCCAGAGGAACTC
TTTGCAGATGCGGGAGTACTTGCAATTGAGCATGCTGATTTTGATGGTATTGAACGTCTG
GCTCTAGTAACTGGTGGTGAGATTGCATCAACCTTTGACAATCCAGAGTCGGTTAAGCTT
GGGCACTGCAAGCTGATAGAAGAAATTATGATTGGTGAGGACAAATTGATCCATTTTTCG
GGTGTTGAAATGGGTCAGGCATGCACAATAGTATTGAGAGGTGCAAGCTTTCATGTGTTG
GATGAGGCAGAAAGGTCTCTGCATGATGCCTTGTGTGTGCTTTCTCAGACAGTGATTGAC
AGCCGAGTTTTGCTTGGAGGTGGTTGGCCTGAGATGGTGATGGCAAAGGAAGTGGATGAG
CTGGCCCGGAAAACTCCTGGGAAAAAATCTCATGCTATTGAAGCTTTTTCACGGGCACTC
ATATCCATTCCAACAACCATTGCAGACAATGCAGGGCTGGATAGTGCTGAGTTGATAGCA
CAGCTCCGTGCAGAGCACCACAAGGAAGAAAGCCACGCAGGGATTGATGTCATCTCTGGT
TCGGTAGGAGATATGGCAGAACTGGGGATTTCTGAAGCATTCAAAGTTAAGCAGGCTGTA
TTACTCTCTGCCACTGAGGCTGCTGAGATGATTCTTAGAGTTGATGAAATTATAACTTGT
GCCCCACGGAGAAGAGAAGATAGAATGTGA

Peptide Sequence

PEP ID

VIT_18s0001g00480.t01
PEP Infomation

pep chromosome:12X:18:1358106:1364569:-1 gene:VIT_18s0001g00480 transcript:VIT_18s0001g00480.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAIDNLFKDDATEEKGERARMASFIGAMAIADLVKTTLGPKGMDKILQSTGRGRSVTVTN
DGATILKSLHIDNPAAKVLVGTDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHP
MTIISGYRMAAECARNALLQKVMDNKEDAEKFKLDLMKIAMTTLSSKILSQDKEHFAKLA
VDAVMRLKGSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIGIGQPKRIENAKILVANTA
MDTDKVKIYGARVRVDSMSRVAQIEGAEKEKMREKVQKIIGHGINCFVNRQLIYNFPEEL
FADAGVLAIEHADFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFS
GVEMGQACTIVLRGASFHVLDEAERSLHDALCVLSQTVIDSRVLLGGGWPEMVMAKEVDE
LARKTPGKKSHAIEAFSRALISIPTTIADNAGLDSAELIAQLRAEHHKEESHAGIDVISG
SVGDMAELGISEAFKVKQAVLLSATEAAEMILRVDEIITCAPRRREDRM

Transcript Sequence

Transcript ID

VIT_18s0001g00480.t01
Transcript Infomation

cdna chromosome:12X:18:1358106:1364569:-1 gene:VIT_18s0001g00480 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GTTTAAAGTTAGAGAAGAGCCCCATGCGGTGCCCTAAATAGCTTTGGGCGGGACCGGAAG
TCTCAAAACCCTAAGATCTCTTGCATCGATCATCTCGGTCTTCATTTCTCGCAAAGATCA
GACAAGTTATTTGAGCATCTAGGTTCCAGCGAACTTCACTTTCATTCTCTCTCATGGCGA
TCGACAATCTTTTTAAAGATGATGCGACTGAAGAAAAGGGGGAGAGAGCCAGAATGGCGT
CCTTTATTGGAGCAATGGCGATTGCTGACCTGGTTAAGACAACCTTAGGGCCAAAGGGAA
TGGATAAAATTTTGCAATCAACAGGCAGAGGCCGCAGTGTTACTGTTACAAATGATGGTG
CTACCATCTTAAAGTCCCTTCATATTGACAACCCAGCTGCTAAAGTCCTTGTTGGGACAG
ATATATCCAAAGTTCAAGATGATGAGGTTGGTGATGGGACCACTTCAGTTGTTGTTTTGG
CTGGAGAGCTTTTAAGAGAAGCAGAGAAGTTGGTGGCAGCAAAAATTCATCCCATGACAA
TAATTTCAGGTTATCGGATGGCTGCCGAATGTGCTCGGAATGCTTTGTTACAGAAAGTCA
TGGATAATAAAGAGGATGCAGAAAAGTTCAAGTTAGACTTGATGAAGATTGCAATGACTA
CTTTGAGTTCAAAAATTCTTTCCCAGGACAAGGAACATTTTGCAAAACTGGCAGTAGATG
CTGTTATGAGACTGAAGGGCAGCACAAACTTGGAGTCTATTCAAATTATTAAGAAGCCTG
GAGGATCACTCAAAGACTCATTTTTGGATGAAGGGTTTATTCTTGACAAGAAGATAGGCA
TTGGTCAACCAAAACGCATAGAGAATGCAAAGATTTTGGTGGCAAATACTGCAATGGACA
CCGATAAAGTCAAGATTTATGGGGCACGTGTCCGTGTTGACTCAATGTCTAGGGTTGCCC
AGATTGAAGGGGCTGAAAAGGAGAAAATGAGAGAAAAAGTTCAGAAGATTATAGGTCATG
GGATTAACTGCTTTGTTAACAGACAGTTGATTTACAATTTCCCAGAGGAACTCTTTGCAG
ATGCGGGAGTACTTGCAATTGAGCATGCTGATTTTGATGGTATTGAACGTCTGGCTCTAG
TAACTGGTGGTGAGATTGCATCAACCTTTGACAATCCAGAGTCGGTTAAGCTTGGGCACT
GCAAGCTGATAGAAGAAATTATGATTGGTGAGGACAAATTGATCCATTTTTCGGGTGTTG
AAATGGGTCAGGCATGCACAATAGTATTGAGAGGTGCAAGCTTTCATGTGTTGGATGAGG
CAGAAAGGTCTCTGCATGATGCCTTGTGTGTGCTTTCTCAGACAGTGATTGACAGCCGAG
TTTTGCTTGGAGGTGGTTGGCCTGAGATGGTGATGGCAAAGGAAGTGGATGAGCTGGCCC
GGAAAACTCCTGGGAAAAAATCTCATGCTATTGAAGCTTTTTCACGGGCACTCATATCCA
TTCCAACAACCATTGCAGACAATGCAGGGCTGGATAGTGCTGAGTTGATAGCACAGCTCC
GTGCAGAGCACCACAAGGAAGAAAGCCACGCAGGGATTGATGTCATCTCTGGTTCGGTAG
GAGATATGGCAGAACTGGGGATTTCTGAAGCATTCAAAGTTAAGCAGGCTGTATTACTCT
CTGCCACTGAGGCTGCTGAGATGATTCTTAGAGTTGATGAAATTATAACTTGTGCCCCAC
GGAGAAGAGAAGATAGAATGTGAAGATTGGGCTGAGTGTTTGGGTGGAGTAAGAACATGT
GTTGTAATGCACTCAACTTCCCATTAGCTTCAGCTATTAATGAGTTGCATACCAGCTAAA
GAGCGGAAAAAAACTTGATTGCTATGTGTTTTTGGTTGCAAATATCTATTGGCTTGTCTC
AGTTTTTGTTTGGTAAAAAACTGATGCAGGATGTCTACTTTATTCATGTGTTGGAAAAAT
TTTGCTTTCTGAATTTTG