Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g00470.t01
CDS Infomation

cds chromosome:12X:18:1351342:1356940:1 gene:VIT_18s0001g00470 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCCCTGAATTCTTTCCGGGCCTTTCTATCTATCTTTTCTCTCCTCTTCACCATTGTC
GCCGCTGAAGATCCCTACAGATTCTTCACCTGGAATGTCACATTCGGCGACATTTATCCT
CTTGGTGTTCGTCAACAGGGAATCTTGATCAATGGCCAATTCCCAGGTCCTGATATCTAC
TCCGTTACCAACGATAATCTCATTATCAACGTCTACAACAGCTTGACTGAGCCTTTTCTA
CTCTCCTGGAGTGGCGTTCAACAGAGGAGGAACTCGTACGAAGATGGTGTGTACGGAACG
ACATGCCCAATCCCTCCGGGGAGGAACTTCACCTACATTCTCCAAGTGAAGGACCAAATC
GGAAGCTTCTTCTACTTCCCTTCTCTTGATTTCCACAAGGCCGCCGGCGGTTTCGGCGGC
ATCCGAATCCTCAGCCGCCCTAGAATCCCTGTCCCCTTCCCCGATCCCGCCGGCGACATC
ACCGTCCTCATCGGAGATTGGTACAAAGCAAATCACACGACACTGAAGGCCATTCTAGAC
CGGGGTAAGAAGCTTCATTTTCCAGATGGGATCCTCATCAACGGCCGTGGTCCCAATGGA
GTCTCTTTCACTGTGGAGCAAGGAAAAACATACAGGTTCAGGATATCAAATGTTGGGCTG
CAAAATTCACTCAACTTCCGGATTCAAGATCACAAGATGGTGTTGGTTGAAGTGGAGGGA
ACACATACTCTCCAAACTACCTATTCCTCCCTTGATGTTCATGTTGGACAGTCCTACTCT
GTGCTAGTGACTGCTGATCAGCCTGCCCAGGACTTCTACATTGTGGTCTCAACACGGTTC
ACCTCTCAGGTCCTCACCACCACCGGTATTCTCCGATACAGCAACTCTGCTGGTCCAGTC
TCAGGCCCACCCCCAGGTGGACCCACCATCCAAATTGACTGGTCCCTTAACCAGGCTCGC
TCTATCAGGACTAATCTTACAGCAAGTGGACCAAGGCCTAACCCACAAGGCTCTTACCAC
TATGGTATGATCACCACCTCCAGAACAATCAGGCTTGCAAGCTCTGCTGGTCAGGTCAAT
GGCAAGCAAAGATATGCTGTTAATAGTGTATCCTATGTCCCAGGGGACACACCCCTAAAA
GTTGCAGACTTCTTCAAGATTGGAGGAGTTTTCCGTGTTGGAAGCATATCAGACAATCCT
ACTGGGGGAGGAGTATACCTTGATACTTCAGTTATGGGAGCTGACTTCAGAGCATTCGTA
GAAATTGTGTTTGAAAATCCTGAGGACATCATACAGAGCTGGCACATCGATGGCTACTCT
TTCTTTGTAGTCGGAATGGATGGAGGATTGTGGACAGCAAATAGTAGGAACCAGTACAAT
CTCCGTGATGCAGTTGCCCGTTCCACTACTCAGGTATATCCCAAGTCATGGACTGCAATT
TACGTGGCACTCGATAATGTGGGAATGTGGAACGTGAGGTCTGAGTTCTGGGCAAGGCAA
TACCTAGGACAACAATTTTATCTACGGGTTTATTCGCCAGTAGAGTCTATCAGGGATGAA
TTCCCAATTCCAAAGAATGCACTGCTTTGTGGTAAGGCAAGTGGTCGACGAACAAGGCCC
CTCTAA

Peptide Sequence

PEP ID

VIT_18s0001g00470.t01
PEP Infomation

pep chromosome:12X:18:1351342:1356940:1 gene:VIT_18s0001g00470 transcript:VIT_18s0001g00470.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MALNSFRAFLSIFSLLFTIVAAEDPYRFFTWNVTFGDIYPLGVRQQGILINGQFPGPDIY
SVTNDNLIINVYNSLTEPFLLSWSGVQQRRNSYEDGVYGTTCPIPPGRNFTYILQVKDQI
GSFFYFPSLDFHKAAGGFGGIRILSRPRIPVPFPDPAGDITVLIGDWYKANHTTLKAILD
RGKKLHFPDGILINGRGPNGVSFTVEQGKTYRFRISNVGLQNSLNFRIQDHKMVLVEVEG
THTLQTTYSSLDVHVGQSYSVLVTADQPAQDFYIVVSTRFTSQVLTTTGILRYSNSAGPV
SGPPPGGPTIQIDWSLNQARSIRTNLTASGPRPNPQGSYHYGMITTSRTIRLASSAGQVN
GKQRYAVNSVSYVPGDTPLKVADFFKIGGVFRVGSISDNPTGGGVYLDTSVMGADFRAFV
EIVFENPEDIIQSWHIDGYSFFVVGMDGGLWTANSRNQYNLRDAVARSTTQVYPKSWTAI
YVALDNVGMWNVRSEFWARQYLGQQFYLRVYSPVESIRDEFPIPKNALLCGKASGRRTRP
L

Transcript Sequence

Transcript ID

VIT_18s0001g00470.t01
Transcript Infomation

cdna chromosome:12X:18:1351342:1356940:1 gene:VIT_18s0001g00470 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATCCTCTCCCACTTGCAACTCCCCACCATCACCATCGCTCAAGAAATGGCCCTGAATTCT
TTCCGGGCCTTTCTATCTATCTTTTCTCTCCTCTTCACCATTGTCGCCGCTGAAGATCCC
TACAGATTCTTCACCTGGAATGTCACATTCGGCGACATTTATCCTCTTGGTGTTCGTCAA
CAGGGAATCTTGATCAATGGCCAATTCCCAGGTCCTGATATCTACTCCGTTACCAACGAT
AATCTCATTATCAACGTCTACAACAGCTTGACTGAGCCTTTTCTACTCTCCTGGAGTGGC
GTTCAACAGAGGAGGAACTCGTACGAAGATGGTGTGTACGGAACGACATGCCCAATCCCT
CCGGGGAGGAACTTCACCTACATTCTCCAAGTGAAGGACCAAATCGGAAGCTTCTTCTAC
TTCCCTTCTCTTGATTTCCACAAGGCCGCCGGCGGTTTCGGCGGCATCCGAATCCTCAGC
CGCCCTAGAATCCCTGTCCCCTTCCCCGATCCCGCCGGCGACATCACCGTCCTCATCGGA
GATTGGTACAAAGCAAATCACACGACACTGAAGGCCATTCTAGACCGGGGTAAGAAGCTT
CATTTTCCAGATGGGATCCTCATCAACGGCCGTGGTCCCAATGGAGTCTCTTTCACTGTG
GAGCAAGGAAAAACATACAGGTTCAGGATATCAAATGTTGGGCTGCAAAATTCACTCAAC
TTCCGGATTCAAGATCACAAGATGGTGTTGGTTGAAGTGGAGGGAACACATACTCTCCAA
ACTACCTATTCCTCCCTTGATGTTCATGTTGGACAGTCCTACTCTGTGCTAGTGACTGCT
GATCAGCCTGCCCAGGACTTCTACATTGTGGTCTCAACACGGTTCACCTCTCAGGTCCTC
ACCACCACCGGTATTCTCCGATACAGCAACTCTGCTGGTCCAGTCTCAGGCCCACCCCCA
GGTGGACCCACCATCCAAATTGACTGGTCCCTTAACCAGGCTCGCTCTATCAGGACTAAT
CTTACAGCAAGTGGACCAAGGCCTAACCCACAAGGCTCTTACCACTATGGTATGATCACC
ACCTCCAGAACAATCAGGCTTGCAAGCTCTGCTGGTCAGGTCAATGGCAAGCAAAGATAT
GCTGTTAATAGTGTATCCTATGTCCCAGGGGACACACCCCTAAAAGTTGCAGACTTCTTC
AAGATTGGAGGAGTTTTCCGTGTTGGAAGCATATCAGACAATCCTACTGGGGGAGGAGTA
TACCTTGATACTTCAGTTATGGGAGCTGACTTCAGAGCATTCGTAGAAATTGTGTTTGAA
AATCCTGAGGACATCATACAGAGCTGGCACATCGATGGCTACTCTTTCTTTGTAGTCGGA
ATGGATGGAGGATTGTGGACAGCAAATAGTAGGAACCAGTACAATCTCCGTGATGCAGTT
GCCCGTTCCACTACTCAGGTATATCCCAAGTCATGGACTGCAATTTACGTGGCACTCGAT
AATGTGGGAATGTGGAACGTGAGGTCTGAGTTCTGGGCAAGGCAATACCTAGGACAACAA
TTTTATCTACGGGTTTATTCGCCAGTAGAGTCTATCAGGGATGAATTCCCAATTCCAAAG
AATGCACTGCTTTGTGGTAAGGCAAGTGGTCGACGAACAAGGCCCCTCTAAGAGCCAGCG
GCAAGCCACCAAAGCTCTGGAAGTGTTAGGGGAAACCTGTCTGGCATAGGAGGATTATTA
AGAGTAGAGATATGCATATAATCTTTATGCGTGGGAGTTTAAATGACCTCAGCTCGAGGT
CACATTCTTTTTTAACTAAAGGTTGTATTTTGTTTTGTTACTATTTATGTATTATGCCAT
TTTATAAAGAGAGGTGGTTAAAACTTATTAAATATCCTCTATTTGTAACAGCAACTTTGT
GTGTCTCTCTCTTTATAATAATATTAGGCAATTTACCTTGTTACCC