Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_18s0001g00440.t01
CDS Infomation	cds chromosome:12X:18:1330117:1337522:1 gene:VIT_18s0001g00440 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cytoplasmic tRNA 2-thiolation protein 1 [Source:UniProtKB/TrEMBL;Acc:E0CQT4]
Sequence	ATGGGGGAAGCTGAGGTTAAGCCTAAGAAGGCTGGCCCTGTACAGTGCTCCATCTGTAGC CAGAGGAGAGCCGCTCTTAAGCGCCCCAAAACCCTAGAGCAGATTTGCAGGGAGTGTTTC TATGCTGTTTTTGAGGAAGAGATCCATAGAGTAGTCGTTGACAACCAACTATTCAAACCT GGTGAGCGCATTGCCATTGGAGCTTCTGGGGGAAAAGATTCCACAGTCCTTGCTTATGTA TTATCAGAATTGAATCGCAGGCATAATTATGGCCTCGATCTCTTCCTTTTGTCAGTTGAC GAGGGAATTACTGGGTACAGGGATGACTCACTTGAAACTGTCAAAAGAAACGAAATTCAG TATGGCCTGCCACTGAAGGTTGTATCTTACAAGGATTTGTATGGATGGACGATGGATGAA ATAGTGAAGATGATAGGTTTAAAGAACAACTGCACATTTTGTGGTGTTTTTCGTCGTCAG GCTCTTGATCGTGGTGCTGCAATGTTGAAAGTAGACAAGCTTGCTACTGGACATAATGCA GATGATATTGCTGAAACTGTACTTTTAAACATATTACGAGGTGATATTGCCAGACTGAGT AGGTGCACTTCTATAATCACTGGTGAAGATGGACCAATTCCAAGATGCAAGCCTTTTAAG TATACCTATGAAAAGGAGATTGTTATATATCCTTACAGCTTTCTGCAAAACCTTAACCGG ATTTACACGTATGCATATTTCAAAAGGCTAGACTACTTTTCCACCGAATGCATTTATTCT CCAAACGCATATCGTGGTTTTGCTCGTGAGTTCATTAAAGATTTGGAAAGGATCAGGCCC AGAGCTATACTTGACATCATCAGATCAGGTGAAAAGTTTAGGATATCCACTTCTGCAAAA ATGCCAGAGCAGGGAACATGTGAACGGTGTGGTTATATTTCTAGCCAGAAATGGTGTAAA GCTTGTGTTTTGCTGGAAGGATTGAACCGCGGTTTGCCAAAGTTGGGTATTGGGCGGACT CGAGGCCTCAATAATGGTCTTGAGTGCGATACAAAACAATCCAATGGAGTGAAGAATATC CAGAGCAAACAATGTGGAACTTTGGATTTCTGA

Peptide Sequence

PEP ID	VIT_18s0001g00440.t01
PEP Infomation	pep chromosome:12X:18:1330117:1337522:1 gene:VIT_18s0001g00440 transcript:VIT_18s0001g00440.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cytoplasmic tRNA 2-thiolation protein 1 [Source:UniProtKB/TrEMBL;Acc:E0CQT4]
Sequence	MGEAEVKPKKAGPVQCSICSQRRAALKRPKTLEQICRECFYAVFEEEIHRVVVDNQLFKP GERIAIGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ YGLPLKVVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAAMLKVDKLATGHNA DDIAETVLLNILRGDIARLSRCTSIITGEDGPIPRCKPFKYTYEKEIVIYPYSFLQNLNR IYTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERIRPRAILDIIRSGEKFRISTSAK MPEQGTCERCGYISSQKWCKACVLLEGLNRGLPKLGIGRTRGLNNGLECDTKQSNGVKNI QSKQCGTLDF

Transcript Sequence

Transcript ID	VIT_18s0001g00440.t01
Transcript Infomation	cdna chromosome:12X:18:1330117:1337522:1 gene:VIT_18s0001g00440 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cytoplasmic tRNA 2-thiolation protein 1 [Source:UniProtKB/TrEMBL;Acc:E0CQT4]
Sequence	GGTACTGTTACAATAGAAACACATGTAGCTGCCGTTTCGATTATTACTGGTAGTGATAGA AACCGAAGATTGTATCCGCCTCTCTTCTCTTCCTCGACAGGCCTCTGGCGGCTGCTTCTC TCGAAGTTTCTAGTGACTTCTATTGTTTGTTTTCGGAGACAATTGCTTCTGTAAGTATCA ATTTTGGGAAATAATTCCTCTGGTTGGGAGTTTGCAGAGTGAATGGGGGAAGCTGAGGTT AAGCCTAAGAAGGCTGGCCCTGTACAGTGCTCCATCTGTAGCCAGAGGAGAGCCGCTCTT AAGCGCCCCAAAACCCTAGAGCAGATTTGCAGGGAGTGTTTCTATGCTGTTTTTGAGGAA GAGATCCATAGAGTAGTCGTTGACAACCAACTATTCAAACCTGGTGAGCGCATTGCCATT GGAGCTTCTGGGGGAAAAGATTCCACAGTCCTTGCTTATGTATTATCAGAATTGAATCGC AGGCATAATTATGGCCTCGATCTCTTCCTTTTGTCAGTTGACGAGGGAATTACTGGGTAC AGGGATGACTCACTTGAAACTGTCAAAAGAAACGAAATTCAGTATGGCCTGCCACTGAAG GTTGTATCTTACAAGGATTTGTATGGATGGACGATGGATGAAATAGTGAAGATGATAGGT TTAAAGAACAACTGCACATTTTGTGGTGTTTTTCGTCGTCAGGCTCTTGATCGTGGTGCT GCAATGTTGAAAGTAGACAAGCTTGCTACTGGACATAATGCAGATGATATTGCTGAAACT GTACTTTTAAACATATTACGAGGTGATATTGCCAGACTGAGTAGGTGCACTTCTATAATC ACTGGTGAAGATGGACCAATTCCAAGATGCAAGCCTTTTAAGTATACCTATGAAAAGGAG ATTGTTATATATCCTTACAGCTTTCTGCAAAACCTTAACCGGATTTACACGTATGCATAT TTCAAAAGGCTAGACTACTTTTCCACCGAATGCATTTATTCTCCAAACGCATATCGTGGT TTTGCTCGTGAGTTCATTAAAGATTTGGAAAGGATCAGGCCCAGAGCTATACTTGACATC ATCAGATCAGGTGAAAAGTTTAGGATATCCACTTCTGCAAAAATGCCAGAGCAGGGAACA TGTGAACGGTGTGGTTATATTTCTAGCCAGAAATGGTGTAAAGCTTGTGTTTTGCTGGAA GGATTGAACCGCGGTTTGCCAAAGTTGGGTATTGGGCGGACTCGAGGCCTCAATAATGGT CTTGAGTGCGATACAAAACAATCCAATGGAGTGAAGAATATCCAGAGCAAACAATGTGGA ACTTTGGATTTCTGAGTGGCTTTCCTAGGGCATCAACTTTGGTAGACTCCAAGATTTGAG TCTCTTTTGAAGCCTGCAAGCGATATTAAGTTGATGCTTTGGGGCACATGAGAAGTGATA GTAACTCAAACCATATGGCTA