Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g00290.t01
CDS Infomation

cds chromosome:12X:18:1253932:1257727:1 gene:VIT_18s0001g00290 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGCACAATAGCGAGCTGATGGTCGATCCCAGGAGTGGGTTTTGCAGATCGAACTCC
GTTTTTTATAGTAAACGTAATCCCGTTTCTCTGCCGCAGAAGGAGTTTATCGACGTCACC
ACCTTCATCTCTTCCCGGCCTCATCCTGGGAAGACGGCCTTCATCGACGCGGCCTCAGGC
CACCGCCTCAGTTTCTACGAAGTCTGGAGAGCCGTCGATGCCGTGTCGAGTTGTCTCGCC
GACATGGGGATCCGGAAAGGCCATGTCATCCTTTTGCTGTCTCCCAACTCCATTTTGTTC
CCCATCGTTTGTCTCTCGGTGATGTCTCTCGGCGCCGTGATCACTACCACGAACCCACTC
AACACGGCTCGCGAAATCGGCAAGCAGATAGCCGATTCCAAGCCTGTTCTTGCGTTCACG
ATTCCGTCACTCGTGCCCAAACTCGCGGGGTCGAATCTGCCCATTGTGTTGATGGGGGGA
GAGGGAAACACCCCAGCTCCTGCTGGGGTTGTGGGTTCATTAGAAGAAATGATGAGGAGG
GAGCCGAGTGGGAAGCGAGTCGGGGAGCGAGTTAACCAGGAGGACACGGCGACGCTGCTC
TACTCGTCCGGCACCACCGGCGCGAGCAAAGGAGTGGTGTCGTCGCATAGAAACCTCATC
GCCATGGTTCAGACCATCGTGAGCCGGTTCAGCTCCGAAGATGGAGAGCAGACCTTCATC
TGCACCGTCCCCATGTTCCACATCTACGGCTTAGCGGCGTTCGCAATGGGTATGCTGGCG
TCGGGATCAACGGTGGTGGTGCTCTCGAGATTCGAGATGGATGAGATGCTTTCTTCCATC
TCCAAGTACCGAGCCACGTGCCTGCCTCTCGTGCCGCCCATACTGGTGGCGCTCGTTCAC
AGCGCTGATAAAATTAAGGCCAAGTACGATTTGAATTCTCTACAATCTACTCTCTCCGGT
GGAGCTCCACTGAGCAAGGAGGTCATAGAGGGGTTCGCAGAAAAATACCCATCTGTGAAA
ATTCTTCAAGGATACGGCCTGACAGAGTCCACCGGCATCGGAGCTTCTACGGACTCTCTG
GAGGAGAGCCGCCGGTACGGGACGGCGGGGCTGTTGTCGCCGAGCATGGAGGCTAAGATC
GTGGACCCAGGAAGTGGAAAGGCATTGACGGTGAACCAGACCGGAGAGCTTTGGCTGAGA
GGTCCCACCATTATGAAAGGTTATTTCAGTAATCCAGAAGTGACTACATCCACTCTTGAT
TCAAGTGGATGGTTGAGAACTGGAGATCTCTGCTACATCGATGATGATGGATTCATTTTC
ATTGTTGATAGGTTGAAGGAGCTGATCAAATACAAAGGATATCAGGTTCCTCCAGCTGAA
CTAGAGGCCTTGTTACTTACTCACCCAGAGATTGCTGATGCTGCTGTTATACCATTCCCA
GATAAGGAAGTGGGGCAATATCCTATGGCATACATTAATAGAAAAGCAGGAAGCAATCTG
TCCGAGTCTGCGGTCATGGATTTCATAGCAAAACAGGTGGCTCCATACAAGAGAATCCGG
CGAGTCGCATTTGTAGATTCCATTCCCAAAAATGCATCAGGCAAGATTCTGAGGAAGGAT
CTCATACAACTTGCAACCTCCAAACTCTGA

Peptide Sequence

PEP ID

VIT_18s0001g00290.t01
PEP Infomation

pep chromosome:12X:18:1253932:1257727:1 gene:VIT_18s0001g00290 transcript:VIT_18s0001g00290.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAHNSELMVDPRSGFCRSNSVFYSKRNPVSLPQKEFIDVTTFISSRPHPGKTAFIDAASG
HRLSFYEVWRAVDAVSSCLADMGIRKGHVILLLSPNSILFPIVCLSVMSLGAVITTTNPL
NTAREIGKQIADSKPVLAFTIPSLVPKLAGSNLPIVLMGGEGNTPAPAGVVGSLEEMMRR
EPSGKRVGERVNQEDTATLLYSSGTTGASKGVVSSHRNLIAMVQTIVSRFSSEDGEQTFI
CTVPMFHIYGLAAFAMGMLASGSTVVVLSRFEMDEMLSSISKYRATCLPLVPPILVALVH
SADKIKAKYDLNSLQSTLSGGAPLSKEVIEGFAEKYPSVKILQGYGLTESTGIGASTDSL
EESRRYGTAGLLSPSMEAKIVDPGSGKALTVNQTGELWLRGPTIMKGYFSNPEVTTSTLD
SSGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPEIADAAVIPFP
DKEVGQYPMAYINRKAGSNLSESAVMDFIAKQVAPYKRIRRVAFVDSIPKNASGKILRKD
LIQLATSKL

Transcript Sequence

Transcript ID

VIT_18s0001g00290.t01
Transcript Infomation

cdna chromosome:12X:18:1253932:1257727:1 gene:VIT_18s0001g00290 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGCACAATAGCGAGCTGATGGTCGATCCCAGGAGTGGGTTTTGCAGATCGAACTCC
GTTTTTTATAGTAAACGTAATCCCGTTTCTCTGCCGCAGAAGGAGTTTATCGACGTCACC
ACCTTCATCTCTTCCCGGCCTCATCCTGGGAAGACGGCCTTCATCGACGCGGCCTCAGGC
CACCGCCTCAGTTTCTACGAAGTCTGGAGAGCCGTCGATGCCGTGTCGAGTTGTCTCGCC
GACATGGGGATCCGGAAAGGCCATGTCATCCTTTTGCTGTCTCCCAACTCCATTTTGTTC
CCCATCGTTTGTCTCTCGGTGATGTCTCTCGGCGCCGTGATCACTACCACGAACCCACTC
AACACGGCTCGCGAAATCGGCAAGCAGATAGCCGATTCCAAGCCTGTTCTTGCGTTCACG
ATTCCGTCACTCGTGCCCAAACTCGCGGGGTCGAATCTGCCCATTGTGTTGATGGGGGGA
GAGGGAAACACCCCAGCTCCTGCTGGGGTTGTGGGTTCATTAGAAGAAATGATGAGGAGG
GAGCCGAGTGGGAAGCGAGTCGGGGAGCGAGTTAACCAGGAGGACACGGCGACGCTGCTC
TACTCGTCCGGCACCACCGGCGCGAGCAAAGGAGTGGTGTCGTCGCATAGAAACCTCATC
GCCATGGTTCAGACCATCGTGAGCCGGTTCAGCTCCGAAGATGGAGAGCAGACCTTCATC
TGCACCGTCCCCATGTTCCACATCTACGGCTTAGCGGCGTTCGCAATGGGTATGCTGGCG
TCGGGATCAACGGTGGTGGTGCTCTCGAGATTCGAGATGGATGAGATGCTTTCTTCCATC
TCCAAGTACCGAGCCACGTGCCTGCCTCTCGTGCCGCCCATACTGGTGGCGCTCGTTCAC
AGCGCTGATAAAATTAAGGCCAAGTACGATTTGAATTCTCTACAATCTACTCTCTCCGGT
GGAGCTCCACTGAGCAAGGAGGTCATAGAGGGGTTCGCAGAAAAATACCCATCTGTGAAA
ATTCTTCAAGGATACGGCCTGACAGAGTCCACCGGCATCGGAGCTTCTACGGACTCTCTG
GAGGAGAGCCGCCGGTACGGGACGGCGGGGCTGTTGTCGCCGAGCATGGAGGCTAAGATC
GTGGACCCAGGAAGTGGAAAGGCATTGACGGTGAACCAGACCGGAGAGCTTTGGCTGAGA
GGTCCCACCATTATGAAAGGTTATTTCAGTAATCCAGAAGTGACTACATCCACTCTTGAT
TCAAGTGGATGGTTGAGAACTGGAGATCTCTGCTACATCGATGATGATGGATTCATTTTC
ATTGTTGATAGGTTGAAGGAGCTGATCAAATACAAAGGATATCAGGTTCCTCCAGCTGAA
CTAGAGGCCTTGTTACTTACTCACCCAGAGATTGCTGATGCTGCTGTTATACCATTCCCA
GATAAGGAAGTGGGGCAATATCCTATGGCATACATTAATAGAAAAGCAGGAAGCAATCTG
TCCGAGTCTGCGGTCATGGATTTCATAGCAAAACAGGTGGCTCCATACAAGAGAATCCGG
CGAGTCGCATTTGTAGATTCCATTCCCAAAAATGCATCAGGCAAGATTCTGAGGAAGGAT
CTCATACAACTTGCAACCTCCAAACTCTGAGAAGTTGTCTGGGTTGCTTCTTGGGCGTCA
TGGATTTGGAAAAGTAATAATAATAATGTTGACTCCAAATCCATCATGATAACATGTATG
TTATAATTTAGCCCCCCTTTTGTTTTTTCCTTCTCTTTTTGGGTTATTGATTGGGTTTGA
TCATTGATGTGAAAGATTCCATTTGGTGTTTGGGAAAAGTAGAACATGGAAAAGTGTCTT
TGAG