Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g00280.t01
CDS Infomation

cds chromosome:12X:18:1249442:1253931:1 gene:VIT_18s0001g00280 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGCATAATAGCGAGCTGATGATCGATCCCAGAAGTGGGTTCTGCAAATCGAACTCC
ATTTTTTACAGTAAACGTAGACCCCTTTCTCTGCCACAGAACGAATTTATAGACGTCGCC
ACCTTCATCTCTTCTCGCCCACACCAAGGAAAGACGGCGTTTATCGATGCCGCCACTGGC
CGCCGCCTCACTTTCACCGATGTCTGGAGAGCTGTTGATTCGGTGTCGTCGTGTCTCTCC
GAGTTGGGGATTCGGAAAGGTGACGTCATCCTATTGCTGACTCCCAACTCCATTTTCTTT
CCGATTGTTTGTCTCTCGGTGTTGTCTCTCGGCGCCGTGGTCACCACGACGAACCCGCTC
AACACGCCTCGCGAAATCGGCAAGCAGATTGTCGACTCCAAACCGGTTCTCGTTTTCACA
ACTCAGTCACTCGCGCCTAAACTCACTGGGTCGAATCTTCCCATTGTGTTGATGGGAGAA
CACGGCGACTATCATGCTGGAGCTGAGGTTGTGGGTTCTTTAGACGAAATGATAAGGAAG
GAGCCGAATGGGAAGCGAGTCGGGGAGCGAGTGAATCAGGAGGACGCGGCGACTCTGCTC
TACTCGTCCGGCACGACCGGCGAGAGCAAGGGGGTGGTGTCGTCGCACAGAAACCTCATC
GCCATGGTTCAGAGCATCGTGAGCATGAACAGCTTTGAAGATGAAGAGGAGAGCTTTGTC
TGTTTCCTTCCCATGTTCCACATGTACGGTCTAGGGGCGTTCGCACTGGGGAGGCTGGCG
CGCGGATCAACGGTTATCGTGCTTCCGAGATTCGAGATGAACGAGATGCTCACTACCATC
TCCAAGTACCGAGCCACTTGCCTCCCACTCGTGCCGCCCATACTGGTGGCGCTTGTGAAC
GGCGCTGATCAGATAAAGGCCAAGTACGACTTGAGTTCGCTACAGTATATTATATGCGGT
GGAGCCCCACTGAGTAAGGAGGTGATAGAGGAGTTCTTGGAAAAGTACCCAAACGTTAAC
ATTCGTCAGGGATACGCACTGACGGAGTCGACCACAGTCGGAGCGTCGACACATACTCTG
GAGGAGAGCCGGCGGCATGGAACAGCGGGTCTGCTGTCGCCGAGCATGGAGGCGAAGATC
GTGGACCCGGAAAGTGGAAAGGCATTGTCGGTGAATCGGGCGGGAGAGCTTTGGCTGAGA
GGTCCCACCATTATGAAAGGTTACTTCAGAAATCCAGAAGCCACTGCATCGGCTCTGGAC
TCAAACGCATGGTTAAGGACCGGAGACCTCTGCTACATTGACGATGATGGGTTCCTTTTC
GTGGTTGATAGGTTGAAGGAGGTGATCAAATACAAAGGATATCAGGTTCCCCCATCTGAA
CTAGAGGCCTTGTTGTTGACTCACCCAGAGATAGTTGATGCCGCTGTTGTACCATTCCCG
GATAAGGAGGTTGGACAGTATCCAATGGCATACATTCATAGGAAAGCTGGAAGCTGCTTG
TCCGAGGATGCTGTCATGGACTTCATATCTAAACAGGTGGCTCCATATAAGAGAATTCGG
AGAGTTGCATTTGTAGCTTCCATTCCCAAGACTCCATCTGGCAAGATCCTTAGGAAGGAT
CTCATTCAACTTGCAACCTCCAAACTTTGA

Peptide Sequence

PEP ID

VIT_18s0001g00280.t01
PEP Infomation

pep chromosome:12X:18:1249442:1253931:1 gene:VIT_18s0001g00280 transcript:VIT_18s0001g00280.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAHNSELMIDPRSGFCKSNSIFYSKRRPLSLPQNEFIDVATFISSRPHQGKTAFIDAATG
RRLTFTDVWRAVDSVSSCLSELGIRKGDVILLLTPNSIFFPIVCLSVLSLGAVVTTTNPL
NTPREIGKQIVDSKPVLVFTTQSLAPKLTGSNLPIVLMGEHGDYHAGAEVVGSLDEMIRK
EPNGKRVGERVNQEDAATLLYSSGTTGESKGVVSSHRNLIAMVQSIVSMNSFEDEEESFV
CFLPMFHMYGLGAFALGRLARGSTVIVLPRFEMNEMLTTISKYRATCLPLVPPILVALVN
GADQIKAKYDLSSLQYIICGGAPLSKEVIEEFLEKYPNVNIRQGYALTESTTVGASTHTL
EESRRHGTAGLLSPSMEAKIVDPESGKALSVNRAGELWLRGPTIMKGYFRNPEATASALD
SNAWLRTGDLCYIDDDGFLFVVDRLKEVIKYKGYQVPPSELEALLLTHPEIVDAAVVPFP
DKEVGQYPMAYIHRKAGSCLSEDAVMDFISKQVAPYKRIRRVAFVASIPKTPSGKILRKD
LIQLATSKL

Transcript Sequence

Transcript ID

VIT_18s0001g00280.t01
Transcript Infomation

cdna chromosome:12X:18:1249442:1253931:1 gene:VIT_18s0001g00280 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TCCATGGCGCATAATAGCGAGCTGATGATCGATCCCAGAAGTGGGTTCTGCAAATCGAAC
TCCATTTTTTACAGTAAACGTAGACCCCTTTCTCTGCCACAGAACGAATTTATAGACGTC
GCCACCTTCATCTCTTCTCGCCCACACCAAGGAAAGACGGCGTTTATCGATGCCGCCACT
GGCCGCCGCCTCACTTTCACCGATGTCTGGAGAGCTGTTGATTCGGTGTCGTCGTGTCTC
TCCGAGTTGGGGATTCGGAAAGGTGACGTCATCCTATTGCTGACTCCCAACTCCATTTTC
TTTCCGATTGTTTGTCTCTCGGTGTTGTCTCTCGGCGCCGTGGTCACCACGACGAACCCG
CTCAACACGCCTCGCGAAATCGGCAAGCAGATTGTCGACTCCAAACCGGTTCTCGTTTTC
ACAACTCAGTCACTCGCGCCTAAACTCACTGGGTCGAATCTTCCCATTGTGTTGATGGGA
GAACACGGCGACTATCATGCTGGAGCTGAGGTTGTGGGTTCTTTAGACGAAATGATAAGG
AAGGAGCCGAATGGGAAGCGAGTCGGGGAGCGAGTGAATCAGGAGGACGCGGCGACTCTG
CTCTACTCGTCCGGCACGACCGGCGAGAGCAAGGGGGTGGTGTCGTCGCACAGAAACCTC
ATCGCCATGGTTCAGAGCATCGTGAGCATGAACAGCTTTGAAGATGAAGAGGAGAGCTTT
GTCTGTTTCCTTCCCATGTTCCACATGTACGGTCTAGGGGCGTTCGCACTGGGGAGGCTG
GCGCGCGGATCAACGGTTATCGTGCTTCCGAGATTCGAGATGAACGAGATGCTCACTACC
ATCTCCAAGTACCGAGCCACTTGCCTCCCACTCGTGCCGCCCATACTGGTGGCGCTTGTG
AACGGCGCTGATCAGATAAAGGCCAAGTACGACTTGAGTTCGCTACAGTATATTATATGC
GGTGGAGCCCCACTGAGTAAGGAGGTGATAGAGGAGTTCTTGGAAAAGTACCCAAACGTT
AACATTCGTCAGGGATACGCACTGACGGAGTCGACCACAGTCGGAGCGTCGACACATACT
CTGGAGGAGAGCCGGCGGCATGGAACAGCGGGTCTGCTGTCGCCGAGCATGGAGGCGAAG
ATCGTGGACCCGGAAAGTGGAAAGGCATTGTCGGTGAATCGGGCGGGAGAGCTTTGGCTG
AGAGGTCCCACCATTATGAAAGGTTACTTCAGAAATCCAGAAGCCACTGCATCGGCTCTG
GACTCAAACGCATGGTTAAGGACCGGAGACCTCTGCTACATTGACGATGATGGGTTCCTT
TTCGTGGTTGATAGGTTGAAGGAGGTGATCAAATACAAAGGATATCAGGTTCCCCCATCT
GAACTAGAGGCCTTGTTGTTGACTCACCCAGAGATAGTTGATGCCGCTGTTGTACCATTC
CCGGATAAGGAGGTTGGACAGTATCCAATGGCATACATTCATAGGAAAGCTGGAAGCTGC
TTGTCCGAGGATGCTGTCATGGACTTCATATCTAAACAGGTGGCTCCATATAAGAGAATT
CGGAGAGTTGCATTTGTAGCTTCCATTCCCAAGACTCCATCTGGCAAGATCCTTAGGAAG
GATCTCATTCAACTTGCAACCTCCAAACTTTGACATACGGGGAAGGTAGGAAGAGGCGTG
GTTCACAC