Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0119g00350.t01
CDS Infomation

cds chromosome:12X:17:14000843:14084518:1 gene:VIT_17s0119g00350 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTTTCCAGGCGAAGAAACTCATCAATGATCCAAATGATGTGGTAACGGAGTTCATC
GAGGGTCTTGTGGAAACTTATCCTGGATTGCAGTACCTGGATGGTTTTCCTCAGGTTAAA
GTGGTCTTACGTGCTGATGTTTCGGGTGCAACGTACAACAAAGTTGCAGTTATATCAGGA
GGAGGAAGTGGTCATGAACCTGCCCATGCTGGTTTTGTGGGGGAAGGGATGCTGACAGCA
GCTATATGTGGAGATGTTTTTGCCTCCCCATCAGTTGATTCAATTCTAGCTGGTATTCGA
GCTGTTACTGGTCCCATGGGTGCTCTTCTGATTGTCAAGAATTATACTGGCGATCGGTTA
AATTTTGGTTTGGCCGCCGAGGAAGCAAAATCTGAGGGATACAAAGTTGAGATTGTCATT
GTTGGTGATGATTGTGCCTTACCACCACCTCGAGGCATAGCAGGACGAAGAGGCTTGGCT
GGGACTATTCTTGTTCATAAGGTTGCTGGAGCTGCTGCTGCTGCTGGCCTTTCGCTTGCT
GATGTTGCTGCAGAAGCAAGACATGCATCTGAAATGGTTGGAACGATGGGTGTTGCATTA
ACTGTATGCACACTGCCAGGTCAGGTCACATCTGATCGTCTGGGCCCAGGAAAGATGGAA
CTTGGTCTTGGGATTCACGGGGAACCTGGCGCAGCTGTTGCTGACCTTCAGCCTGTGGAT
GTTGTGGTTTCTCATGTTCTTAAGCAGATTTTATTACCGGAAACTAACTATGTTCCGATC
ACTCGAGGAAACAGAGTGGTGCTCCTCATCAATGGCTTAGGTGCCACCCCTGCAATGGAA
CTGATGATTGCAGCAGGAAAAGCAGTCCCTAGATTGCAGCTGGAACATGGACTAGCTGTT
GATAGAGTGTATACAGGATCATTTATGACTTCTCTTGATATGGCAGGATTTTCAATTTCT
GTCATGAAGGCAGATCAATCAATTTTGCAACGTTTGGATGCTGCAACTAAGGCTCCACAT
TGGCCTGTTGGTGTTGATGGTAATCGCCCAGCTGCCAAGATTCCTGTTCCAATGCCACCT
TGTCGTTCAACAAAGAGTGATGAGTCACTAAGCCGGCCTCAACTGCTGAATGAACAAGGC
TGTATTCTTGAGGTGGCTATTGAAGCAGCAGCAAACTCAGTTATCAATCTTAAGGACTGG
TTAAATGAATGGGATAGCAAAGCAGGTGATGGCGACTGTGGGTCTACCATGTTTAGAGGT
GCAACAGCTATTTTGGAGGACATGAAAAAATTTTATCCTCTGAATGACCCTGCAGAAACA
GTAAATGAAATTGGATCTTCTATCAGAAGAGCTATGGGCGGAACGAGTGGGATCATATAT
GATATATTCTGTAAGGCGGCATATGCACAGCTAAAAGCAAACACCAAAACAGTTGTTACA
GCAAAACAATGGAAAGATGCACTTGAAGCTTCCATTGCTGCTGTCAGTAAATATGGAGGG
GCTAGTGCAGGCTATCGCACAATGTTGGATGCTCTTATTCCAGCATTAACCGTTCTTCAA
GAGAGGTTAGATGCTGAAGATGACCCTGTCACTGCTTTTGTTCTTTCATCCGAAGCAGCA
TTGGATGGGGCTGAGTCCACCAAACACATGCAAGCACAAGCTGGCCGCTCAAGCTATATC
TCCGGAGAGATACTAGCATCAGTTCCAGACCCGGGTGCCATGGCTGCAGCGTCTTGGTAC
CGAGCAGCGGCCTTAGCTGTCAAGGACAAATGCATGGCTTCATGA

Peptide Sequence

PEP ID

VIT_17s0119g00350.t01
PEP Infomation

pep chromosome:12X:17:14000843:14084518:1 gene:VIT_17s0119g00350 transcript:VIT_17s0119g00350.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAFQAKKLINDPNDVVTEFIEGLVETYPGLQYLDGFPQVKVVLRADVSGATYNKVAVISG
GGSGHEPAHAGFVGEGMLTAAICGDVFASPSVDSILAGIRAVTGPMGALLIVKNYTGDRL
NFGLAAEEAKSEGYKVEIVIVGDDCALPPPRGIAGRRGLAGTILVHKVAGAAAAAGLSLA
DVAAEARHASEMVGTMGVALTVCTLPGQVTSDRLGPGKMELGLGIHGEPGAAVADLQPVD
VVVSHVLKQILLPETNYVPITRGNRVVLLINGLGATPAMELMIAAGKAVPRLQLEHGLAV
DRVYTGSFMTSLDMAGFSISVMKADQSILQRLDAATKAPHWPVGVDGNRPAAKIPVPMPP
CRSTKSDESLSRPQLLNEQGCILEVAIEAAANSVINLKDWLNEWDSKAGDGDCGSTMFRG
ATAILEDMKKFYPLNDPAETVNEIGSSIRRAMGGTSGIIYDIFCKAAYAQLKANTKTVVT
AKQWKDALEASIAAVSKYGGASAGYRTMLDALIPALTVLQERLDAEDDPVTAFVLSSEAA
LDGAESTKHMQAQAGRSSYISGEILASVPDPGAMAAASWYRAAALAVKDKCMAS

Transcript Sequence

Transcript ID

VIT_17s0119g00350.t01
Transcript Infomation

cdna chromosome:12X:17:14000843:14084518:1 gene:VIT_17s0119g00350 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GGAAGAGAGGGTTCATAGGAAGATTCGCAGGCATGGCTTTCCAGGCGAAGAAACTCATCA
ATGATCCAAATGATGTGGTAACGGAGTTCATCGAGGGTCTTGTGGAAACTTATCCTGGAT
TGCAGTACCTGGATGGTTTTCCTCAGGTTAAAGTGGTCTTACGTGCTGATGTTTCGGGTG
CAACGTACAACAAAGTTGCAGTTATATCAGGAGGAGGAAGTGGTCATGAACCTGCCCATG
CTGGTTTTGTGGGGGAAGGGATGCTGACAGCAGCTATATGTGGAGATGTTTTTGCCTCCC
CATCAGTTGATTCAATTCTAGCTGGTATTCGAGCTGTTACTGGTCCCATGGGTGCTCTTC
TGATTGTCAAGAATTATACTGGCGATCGGTTAAATTTTGGTTTGGCCGCCGAGGAAGCAA
AATCTGAGGGATACAAAGTTGAGATTGTCATTGTTGGTGATGATTGTGCCTTACCACCAC
CTCGAGGCATAGCAGGACGAAGAGGCTTGGCTGGGACTATTCTTGTTCATAAGGTTGCTG
GAGCTGCTGCTGCTGCTGGCCTTTCGCTTGCTGATGTTGCTGCAGAAGCAAGACATGCAT
CTGAAATGGTTGGAACGATGGGTGTTGCATTAACTGTATGCACACTGCCAGGTCAGGTCA
CATCTGATCGTCTGGGCCCAGGAAAGATGGAACTTGGTCTTGGGATTCACGGGGAACCTG
GCGCAGCTGTTGCTGACCTTCAGCCTGTGGATGTTGTGGTTTCTCATGTTCTTAAGCAGA
TTTTATTACCGGAAACTAACTATGTTCCGATCACTCGAGGAAACAGAGTGGTGCTCCTCA
TCAATGGCTTAGGTGCCACCCCTGCAATGGAACTGATGATTGCAGCAGGAAAAGCAGTCC
CTAGATTGCAGCTGGAACATGGACTAGCTGTTGATAGAGTGTATACAGGATCATTTATGA
CTTCTCTTGATATGGCAGGATTTTCAATTTCTGTCATGAAGGCAGATCAATCAATTTTGC
AACGTTTGGATGCTGCAACTAAGGCTCCACATTGGCCTGTTGGTGTTGATGGTAATCGCC
CAGCTGCCAAGATTCCTGTTCCAATGCCACCTTGTCGTTCAACAAAGAGTGATGAGTCAC
TAAGCCGGCCTCAACTGCTGAATGAACAAGGCTGTATTCTTGAGGTGGCTATTGAAGCAG
CAGCAAACTCAGTTATCAATCTTAAGGACTGGTTAAATGAATGGGATAGCAAAGCAGGTG
ATGGCGACTGTGGGTCTACCATGTTTAGAGGTGCAACAGCTATTTTGGAGGACATGAAAA
AATTTTATCCTCTGAATGACCCTGCAGAAACAGTAAATGAAATTGGATCTTCTATCAGAA
GAGCTATGGGCGGAACGAGTGGGATCATATATGATATATTCTGTAAGGCGGCATATGCAC
AGCTAAAAGCAAACACCAAAACAGTTGTTACAGCAAAACAATGGAAAGATGCACTTGAAG
CTTCCATTGCTGCTGTCAGTAAATATGGAGGGGCTAGTGCAGGCTATCGCACAATGTTGG
ATGCTCTTATTCCAGCATTAACCGTTCTTCAAGAGAGGTTAGATGCTGAAGATGACCCTG
TCACTGCTTTTGTTCTTTCATCCGAAGCAGCATTGGATGGGGCTGAGTCCACCAAACACA
TGCAAGCACAAGCTGGCCGCTCAAGCTATATCTCCGGAGAGATACTAGCATCAGTTCCAG
ACCCGGGTGCCATGGCTGCAGCGTCTTGGTACCGAGCAGCGGCCTTAGCTGTCAAGGACA
AATGCATGGCTTCATGAGGAGCTCTACTCCTTTTTGGTTGCGTATTTTAACCAAGTAAAA
TTTTTGCTCATCTCATGACTTTACATCACCATGTAACAAAATTAGGGCTTCCGCTGTCAG
CTCTCCGCTTATGCAATGTATGCAAAACGCTGAGAGAGTAATGCCGAGAAAGTTTCATCC
ATTCGATCAGGCAATGTAAATCTGGAGATTGTTACCCGTCAGTTGAGAACAATGCCCGTC
AAACTCTGAGCAAATGTTTCCAGATCTTTATAGCTTAATATTTGATCTTTCATTTATTAT
CACTGTTGGAGAATGCCAAATCTTGCCGGAAACTTCCAACCAGTGATTGAAAATCTACAA
GGAGAAATATTTCCATCCTTTCAAAATAATATTGTAGTTTTGATGAACCCATCAACAACA
TCAACTCCTGAAAATTTCAAAGTTTTTATTGCAAAAAACAAAAAAAAAAA