Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0119g00090.t01
CDS Infomation

cds chromosome:12X:17:13359737:13384602:-1 gene:VIT_17s0119g00090 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAATCAACGACGGACATAGTGAAGAAACGCTTCCTAGGGTTTCTCATATGGCAATCA
GTCCACTCTACTATCATCTTCATCCTCTTCACAACCACTCTCTCTCAAAATGGCATCGTT
TCACTACCTTCCCTCCTCACCTGCCTTTCCTTCCTCACCTTCCACCTCTCCCTCCTACTC
TTCTCCGCCTCCCTCTCCTTCATCTCCTCTCCCTACTACGACCGTCCCTCTTCCCCTTAC
GACCTCGCCCTCGGCCTCCTCCGCTTTCTCTTCTCCGGCCAGTCTCAGCCCCATGGCTTT
CTCCGCCGGGCCAGGGTTTTCCTGGGTCTGTTCGGGTTTTTGCTGGAGGCGGCACTGGCC
GGCACGGTGGCGCTGGTGTCTCTGTGCAAGTCTGAGTCGTGTGGTGGAGTGGCGGTGGTG
GGGTTGAGGGGTTTTGGATTTGGCTTGGTTTATGGGATTTATTATGTGTTCAAGCGGCGC
TGGGTTTTGGAGTTTCCTATCATTCAGCGTCCCCTTTTCTTTAGCTTCAAAATGGGTCTC
CCTTCAGCTATTGGACAAGCTGTAAAGCTTTCTGCTGCAGCATACATATTTTCGGGTGTG
CTGATACTATTTCTGCAAGATCAGTTTGGGAGTCATATTAAAATGGGAAATTTCATTCTT
GAACAGATCATATTTTATGTTGGAATTTTTTCAGTGTGTCTCTGTTGGGAATTAAGTCAC
CATCTGCATCAGGTGATGCATACAAAGAGGTATATATTTGCACCACCAAAAGGATCAGCG
GCAGCAGAAACAAATCCAAGTGAACCTCTCTTGGCAGCTCTAGAGGAGAGCACTCCAAAA
TCTCTTCCTCGGTATCTTGCATATCTTGATCTGTGTATGGTTTGTGACAATAATGTTGAT
AGCTGGCGCCGAGCTGCCTTCTTTGAAGAAACTGGTGAAACTTACAAAAAAGTTGTAGCT
GTGTGCCTGAGGCCTCTGGAACATCTTGCATCTAATTTTGCTGAAGGCTTGGAAAGTTCT
TCTGTTGATAAAACTTACCAACAATCCAGTCAGTTACAGTTGCCAACTGTCTCAGAACGA
GACTCAAGGTTCTCTGAACCATTTAGCAACATCCAGCTATGTGCATGGTGTTCCTGGGCA
GTTGCCTCACTTACTGCTCGTTCACACAAGGAGGATAGGTTTGGGGTTGCTCAACTTTCC
GGCAGTAATGCTGCTGTTATATCAACCCTGTTATCTTGCCTGCTTGCTGTTGAAACGTTC
CTGGGAAAGAAGACCAGCTTGCAGTCCCCCAATGCTCTGATGGGACCGGCTGGTATCAAA
TGGGCCACAGTGACCACAGCAAGAAGTGACGCGGCAACCAGTGTTGTGGGTAAAAAGAGA
GGTTTCCCACTACACTCACAAGCTTATGCCATTGCTGATGTTTTAAGAACTTCAATCTAC
TGCATTGTCTCTGTTTTTCATGAGGAAATGTTGACTGGCGCTAAAGCAGGACTACTTGAG
AAGGATTGGATCATCGGTGGCAAACCTCTTTATGGAACCCGCGAACTCCTTTTGCAGAAA
CTGCATCTTTTCCTGGATTTCCGAGCTTGCTAG

Peptide Sequence

PEP ID

VIT_17s0119g00090.t01
PEP Infomation

pep chromosome:12X:17:13359737:13384602:-1 gene:VIT_17s0119g00090 transcript:VIT_17s0119g00090.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MKSTTDIVKKRFLGFLIWQSVHSTIIFILFTTTLSQNGIVSLPSLLTCLSFLTFHLSLLL
FSASLSFISSPYYDRPSSPYDLALGLLRFLFSGQSQPHGFLRRARVFLGLFGFLLEAALA
GTVALVSLCKSESCGGVAVVGLRGFGFGLVYGIYYVFKRRWVLEFPIIQRPLFFSFKMGL
PSAIGQAVKLSAAAYIFSGVLILFLQDQFGSHIKMGNFILEQIIFYVGIFSVCLCWELSH
HLHQVMHTKRYIFAPPKGSAAAETNPSEPLLAALEESTPKSLPRYLAYLDLCMVCDNNVD
SWRRAAFFEETGETYKKVVAVCLRPLEHLASNFAEGLESSSVDKTYQQSSQLQLPTVSER
DSRFSEPFSNIQLCAWCSWAVASLTARSHKEDRFGVAQLSGSNAAVISTLLSCLLAVETF
LGKKTSLQSPNALMGPAGIKWATVTTARSDAATSVVGKKRGFPLHSQAYAIADVLRTSIY
CIVSVFHEEMLTGAKAGLLEKDWIIGGKPLYGTRELLLQKLHLFLDFRAC

Transcript Sequence

Transcript ID

VIT_17s0119g00090.t01
Transcript Infomation

cdna chromosome:12X:17:13359737:13384602:-1 gene:VIT_17s0119g00090 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAATCAACGACGGACATAGTGAAGAAACGCTTCCTAGGGTTTCTCATATGGCAATCA
GTCCACTCTACTATCATCTTCATCCTCTTCACAACCACTCTCTCTCAAAATGGCATCGTT
TCACTACCTTCCCTCCTCACCTGCCTTTCCTTCCTCACCTTCCACCTCTCCCTCCTACTC
TTCTCCGCCTCCCTCTCCTTCATCTCCTCTCCCTACTACGACCGTCCCTCTTCCCCTTAC
GACCTCGCCCTCGGCCTCCTCCGCTTTCTCTTCTCCGGCCAGTCTCAGCCCCATGGCTTT
CTCCGCCGGGCCAGGGTTTTCCTGGGTCTGTTCGGGTTTTTGCTGGAGGCGGCACTGGCC
GGCACGGTGGCGCTGGTGTCTCTGTGCAAGTCTGAGTCGTGTGGTGGAGTGGCGGTGGTG
GGGTTGAGGGGTTTTGGATTTGGCTTGGTTTATGGGATTTATTATGTGTTCAAGCGGCGC
TGGGTTTTGGAGTTTCCTATCATTCAGCGTCCCCTTTTCTTTAGCTTCAAAATGGGTCTC
CCTTCAGCTATTGGACAAGCTGTAAAGCTTTCTGCTGCAGCATACATATTTTCGGGTGTG
CTGATACTATTTCTGCAAGATCAGTTTGGGAGTCATATTAAAATGGGAAATTTCATTCTT
GAACAGATCATATTTTATGTTGGAATTTTTTCAGTGTGTCTCTGTTGGGAATTAAGTCAC
CATCTGCATCAGGTGATGCATACAAAGAGGTATATATTTGCACCACCAAAAGGATCAGCG
GCAGCAGAAACAAATCCAAGTGAACCTCTCTTGGCAGCTCTAGAGGAGAGCACTCCAAAA
TCTCTTCCTCGGTATCTTGCATATCTTGATCTGTGTATGGTTTGTGACAATAATGTTGAT
AGCTGGCGCCGAGCTGCCTTCTTTGAAGAAACTGGTGAAACTTACAAAAAAGTTGTAGCT
GTGTGCCTGAGGCCTCTGGAACATCTTGCATCTAATTTTGCTGAAGGCTTGGAAAGTTCT
TCTGTTGATAAAACTTACCAACAATCCAGTCAGTTACAGTTGCCAACTGTCTCAGAACGA
GACTCAAGGTTCTCTGAACCATTTAGCAACATCCAGCTATGTGCATGGTGTTCCTGGGCA
GTTGCCTCACTTACTGCTCGTTCACACAAGGAGGATAGGTTTGGGGTTGCTCAACTTTCC
GGCAGTAATGCTGCTGTTATATCAACCCTGTTATCTTGCCTGCTTGCTGTTGAAACGTTC
CTGGGAAAGAAGACCAGCTTGCAGTCCCCCAATGCTCTGATGGGACCGGCTGGTATCAAA
TGGGCCACAGTGACCACAGCAAGAAGTGACGCGGCAACCAGTGTTGTGGGTAAAAAGAGA
GGTTTCCCACTACACTCACAAGCTTATGCCATTGCTGATGTTTTAAGAACTTCAATCTAC
TGCATTGTCTCTGTTTTTCATGAGGAAATGTTGACTGGCGCTAAAGCAGGACTACTTGAG
AAGGATTGGATCATCGGTGGCAAACCTCTTTATGGAACCCGCGAACTCCTTTTGCAGAAA
CTGCATCTTTTCCTGGATTTCCGAGCTTGCTAGATGCATGATCTCTCTTCCCTGTCAACA
GAAAAATTAATAGACCTCGGTTGGGAATCCAAAGAAGTGATGGGAATTCCTATTCAGTTT
GGAAGATAAAAAGAAGAATTTCTTTGTTGTGGTGTTATATTATGCATTGACTAGATTAGA
AGGTTGAATAGCGAGAAATGATATCCTTCTTATCCAAGTTTTGTTATTTGGTTCTGGGAT
TATCATATGGTTCAGAAGCCTATAATTAGATCTAATTTGCTCCTTTCCCCTTTTTTTCCT
CGATCATTTTTCATGTTTGTTGTAATGGATGGATGAGAGTATGGAATATCATAGTGAAGG
ACAACTGATGACTTAAAGAGAACTTGGAAGTGATGCAGAGGTGAACTCTCAGCAGTAACT
CTCCTCAAAACAACTGATTGAAATCAATCCTTTTTGTTCGTCAATTGCAGACAAATCAGT
CTGGCTGAGGCAAATATGAACATTGTGGGAAAGCTTTGATCTCTTGACTCTCTCAGGCTG
GAAAGATAAAAATCATATTGATTTTCAGGGAAGTTTTCTCTCAGAGGCTGTAGGGTGGGT
ATACTTTGTCAGAACCATTTATTTGTGTGATTGATGAGCTATATTGATCATATGAGATTT
ACTGTTTTCAAAGCCCTTGGCTGGATGGAATTGCCCGGAATTTCTATTTGAAATTT