Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0119g00080.t01
CDS Infomation

cds chromosome:12X:17:13346999:13350001:-1 gene:VIT_17s0119g00080 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGGATGGAGCTGAAGAACAGCTTTTTCATGAAGAGAGCTGTCAGGTAGAGATGACG
GTGGAGGAGGTGATAGAAAGGCACGTGGGCTCGCTGGGATTATCCCAGCTCGTGCAGGTG
GTGCTGGTGTCGTTGGCCTGGATGTTTGATTCACAGAACACTTTGGTAACCATATTCACA
GACGCACAGCCATCTGAATGGAGATGCAAAGCAGAAGCATGTAGCGATGGTGGTGGTGGT
GGTGGTGTTTGTGGGCTTTTGCCGGGCACTTGGGAGTGGGTGGCTGGGCATGGAAGCACC
ACTATTGCCGAGTGGGGTCTCATCTGTAACCACAAGTTTCTCGCTGCCATACCCACTTCC
TTGTTCTTCCTCGGCTCTCTCCTCGGATCCGGTGTATCTGGGCGGTTGGCAGACGCATAC
TTGGGAAGGAAGAAGACGGTGGTGATCTCATGCATCCTAACCTCTGCAACTGCATTCCTC
ACTTCCCTCTCTCCCAACCTCTGCATCTATGCACTCCTCCGCTTCGCTAACGGCTTCGCC
AGGTCCGGCATCGGCATCTGCTGTCTCGTCCTCTCCACCGAAGTAGTTGGCCACAAATGG
CGTGGCCAAGTCGGCCAATACGGCTTCTTCTTCTTCACCACTGGCTTCCTCTCCCTTCCC
TTGATCGCCTATCCCTCAAGAAGCTCTTGGAGAAATGTATATAGAATCATCTCCCTCTTC
CCTGTCTCTTACTCTCTCCTCATACTCCCCTTCGTGTCAGAATCGCCACGGTGGTTGCTT
GTCAGGGGGAGAGGCCAAGAGGCAGTTGATGTGTTGAACAAGTTCGCCAGACTCAATGGG
AAGAAGCTGCCCCAGAATCTGAGACTTGCGAACCCGGGTGGAGTGGATGAAGGTGATGCC
ATCAAGAGGAAGAAGAGTCTGTGGAGCACAGGGTGGGCAGCTAAAAGAATGGTAATGGTG
ATGTTAGCTGGTTTTGGGGTTGGGTTTGTTTACTACGGTGTGCAACTCAATGTTGAAAAC
CTTAGCTTCAACCTCTACTTGACTGTTGCCATCAATGCAATCATGGAGATTCCTGCTGTT
CTCATCGGCTCCGTGCTCTTGAGTTTCACAAACCGCCGTCTTCTTTTCTCCAGCTCCATT
TGCTTAGCTGGAGTTGCATGCATTGTGTGCATCTTCTTCTCCGAAGCAGGAGGGCGTCGG
AGGAGAGAAGAATCCAGGGGGAGTTGGCCCCAATTGAGCATTGAAGCCATTGGGTTCATG
GCTGCTTCCACAGCATTTGATGTGCTATATATCTACTGCGTAGAGCTTTTTCCCACCAAT
GTGAGGAACTTTGCAGTGTCAATGCTGCGACAATCACTGATGTTAGGAGCTTCGATTGCG
CCACTGCTGGTTGTTGTTGGGCGGTTGAGTCCGGCTCGATCATTTCTTATATTTGGAATT
CTTTCCATGGTTAGTGGACTATTGGGAATGTCTCTTCCTGAGACCAAGAATGCACCTCTC
TACGAGACTCTGGAGCAGCAAGAAGAAGAGGAGAAACTCACTTGCCTAGCATCAGATGAT
TCAGGTTTGGAACTTGGCAAGTAG

Peptide Sequence

PEP ID

VIT_17s0119g00080.t01
PEP Infomation

pep chromosome:12X:17:13346999:13350001:-1 gene:VIT_17s0119g00080 transcript:VIT_17s0119g00080.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEDGAEEQLFHEESCQVEMTVEEVIERHVGSLGLSQLVQVVLVSLAWMFDSQNTLVTIFT
DAQPSEWRCKAEACSDGGGGGGVCGLLPGTWEWVAGHGSTTIAEWGLICNHKFLAAIPTS
LFFLGSLLGSGVSGRLADAYLGRKKTVVISCILTSATAFLTSLSPNLCIYALLRFANGFA
RSGIGICCLVLSTEVVGHKWRGQVGQYGFFFFTTGFLSLPLIAYPSRSSWRNVYRIISLF
PVSYSLLILPFVSESPRWLLVRGRGQEAVDVLNKFARLNGKKLPQNLRLANPGGVDEGDA
IKRKKSLWSTGWAAKRMVMVMLAGFGVGFVYYGVQLNVENLSFNLYLTVAINAIMEIPAV
LIGSVLLSFTNRRLLFSSSICLAGVACIVCIFFSEAGGRRRREESRGSWPQLSIEAIGFM
AASTAFDVLYIYCVELFPTNVRNFAVSMLRQSLMLGASIAPLLVVVGRLSPARSFLIFGI
LSMVSGLLGMSLPETKNAPLYETLEQQEEEEKLTCLASDDSGLELGK

Transcript Sequence

Transcript ID

VIT_17s0119g00080.t01
Transcript Infomation

cdna chromosome:12X:17:13346999:13350001:-1 gene:VIT_17s0119g00080 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGGATGGAGCTGAAGAACAGCTTTTTCATGAAGAGAGCTGTCAGGTAGAGATGACG
GTGGAGGAGGTGATAGAAAGGCACGTGGGCTCGCTGGGATTATCCCAGCTCGTGCAGGTG
GTGCTGGTGTCGTTGGCCTGGATGTTTGATTCACAGAACACTTTGGTAACCATATTCACA
GACGCACAGCCATCTGAATGGAGATGCAAAGCAGAAGCATGTAGCGATGGTGGTGGTGGT
GGTGGTGTTTGTGGGCTTTTGCCGGGCACTTGGGAGTGGGTGGCTGGGCATGGAAGCACC
ACTATTGCCGAGTGGGGTCTCATCTGTAACCACAAGTTTCTCGCTGCCATACCCACTTCC
TTGTTCTTCCTCGGCTCTCTCCTCGGATCCGGTGTATCTGGGCGGTTGGCAGACGCATAC
TTGGGAAGGAAGAAGACGGTGGTGATCTCATGCATCCTAACCTCTGCAACTGCATTCCTC
ACTTCCCTCTCTCCCAACCTCTGCATCTATGCACTCCTCCGCTTCGCTAACGGCTTCGCC
AGGTCCGGCATCGGCATCTGCTGTCTCGTCCTCTCCACCGAAGTAGTTGGCCACAAATGG
CGTGGCCAAGTCGGCCAATACGGCTTCTTCTTCTTCACCACTGGCTTCCTCTCCCTTCCC
TTGATCGCCTATCCCTCAAGAAGCTCTTGGAGAAATGTATATAGAATCATCTCCCTCTTC
CCTGTCTCTTACTCTCTCCTCATACTCCCCTTCGTGTCAGAATCGCCACGGTGGTTGCTT
GTCAGGGGGAGAGGCCAAGAGGCAGTTGATGTGTTGAACAAGTTCGCCAGACTCAATGGG
AAGAAGCTGCCCCAGAATCTGAGACTTGCGAACCCGGGTGGAGTGGATGAAGGTGATGCC
ATCAAGAGGAAGAAGAGTCTGTGGAGCACAGGGTGGGCAGCTAAAAGAATGGTAATGGTG
ATGTTAGCTGGTTTTGGGGTTGGGTTTGTTTACTACGGTGTGCAACTCAATGTTGAAAAC
CTTAGCTTCAACCTCTACTTGACTGTTGCCATCAATGCAATCATGGAGATTCCTGCTGTT
CTCATCGGCTCCGTGCTCTTGAGTTTCACAAACCGCCGTCTTCTTTTCTCCAGCTCCATT
TGCTTAGCTGGAGTTGCATGCATTGTGTGCATCTTCTTCTCCGAAGCAGGAGGGCGTCGG
AGGAGAGAAGAATCCAGGGGGAGTTGGCCCCAATTGAGCATTGAAGCCATTGGGTTCATG
GCTGCTTCCACAGCATTTGATGTGCTATATATCTACTGCGTAGAGCTTTTTCCCACCAAT
GTGAGGAACTTTGCAGTGTCAATGCTGCGACAATCACTGATGTTAGGAGCTTCGATTGCG
CCACTGCTGGTTGTTGTTGGGCGGTTGAGTCCGGCTCGATCATTTCTTATATTTGGAATT
CTTTCCATGGTTAGTGGACTATTGGGAATGTCTCTTCCTGAGACCAAGAATGCACCTCTC
TACGAGACTCTGGAGCAGCAAGAAGAAGAGGAGAAACTCACTTGCCTAGCATCAGATGAT
TCAGGTTTGGAACTTGGCAAGTAGATCA