Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0119g00070.t01
CDS Infomation

cds chromosome:12X:17:13300012:13308117:-1 gene:VIT_17s0119g00070 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAAGCTGTCATTGCCACTGTTGTTCCATCTTCTTTCGGATTCTCCAGGCCTACCGAT
TCCATTTCCAGATCGACTGTTTTCAATGTCAATAGATCCAATTCTGTGCGCTTCCCCACC
CAATTTCGCTTCTTCAGTGGGTGGCTTAATTTGAAGTCTGGACATAGGAACATGGCTTTT
GGATGCAAGAAATGCACAATAGTTAGAGCATCAGCATCTGCTGACTCATCCGGATCAGCT
GCTCCAATTGCCCCACTTCAGCTGGAATCTCCAATTGGTCAGTTTTTGTCTCAGATCTTG
ATAAGCCACCCACATCTTGTACCTGCTGCTGTTGAACAGCAGCTTGAGCAGCTTCAAACA
GACCGTGATGCTGAGGAACACAAGGAAGAGTCTTCAGCTTCTGGCACTGAGTTAGTATTA
TACAGGAGGATTGCGGAAGTTAAGGCTAATGAAAGGAAAAAAGCTCTTGAAGAAATCTTG
TATGCGTTGGTTGTGCAGAAATTTATGGATGCCAATGTTTCTTTGATACCCACAATAAGC
TCCTCTTCTTCGGACTCGTCTGACCGAGTAGACACATGGCCAAGCCAAGATGGGAAGCTT
GAGCAGCTTCACTCTCCTGAAGCCTATGAGATGATCCAGAATCACCTAGCTCTCATTTTG
GGGAACCGCTTAGGTGATTCAACCTCAGTGGCTCAGATAAGCAAACTCAGGGTTGGGCAG
GTCTATGCAGCATCGGTGATGTATGGTTACTTCCTTAAGCGGGTAGATCAGAGGTTTCAG
CTTGAGAAGACAATGAAAATACTTCCACATGCATTGGATGGGGACAAGGGTTCTGTTCAG
GAAGCCTTGTGGGATAAGATGACTCCCTCTGGCAGTGATGACTCTGTCCAAACTGTAAAA
TCCCACCCTGAGGTCTCATCTTGGGCTGGTGGCTTCACCCCTGGTGGTTTTGGTCATGGG
ATAAAACCCTCCCGACTTAGAAACTATGTGATGTCTTTTGATGCAGAGACACTACAGAGG
TATGCAACAATAAGATCCAAGGAGGCTGTCAGCATCATTGAGAAGCACACAGAGGCATTG
TTTGGAAGACCTGAGATTATTATAACTCCTCAGGGAACAATTGATTCTTCCAAGGATGAA
CTCATCAAGATTAGCTTCGGTGGTTTAAAGAGACTTGTTCTGGAGGCTGTGACTTTTGGT
TCTTTTCTCTGGGATGTTGAGAGCTTTGTGGACTCGAGGTACCATTTTGTTATAAACTAA

Peptide Sequence

PEP ID

VIT_17s0119g00070.t01
PEP Infomation

pep chromosome:12X:17:13300012:13308117:-1 gene:VIT_17s0119g00070 transcript:VIT_17s0119g00070.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEAVIATVVPSSFGFSRPTDSISRSTVFNVNRSNSVRFPTQFRFFSGWLNLKSGHRNMAF
GCKKCTIVRASASADSSGSAAPIAPLQLESPIGQFLSQILISHPHLVPAAVEQQLEQLQT
DRDAEEHKEESSASGTELVLYRRIAEVKANERKKALEEILYALVVQKFMDANVSLIPTIS
SSSSDSSDRVDTWPSQDGKLEQLHSPEAYEMIQNHLALILGNRLGDSTSVAQISKLRVGQ
VYAASVMYGYFLKRVDQRFQLEKTMKILPHALDGDKGSVQEALWDKMTPSGSDDSVQTVK
SHPEVSSWAGGFTPGGFGHGIKPSRLRNYVMSFDAETLQRYATIRSKEAVSIIEKHTEAL
FGRPEIIITPQGTIDSSKDELIKISFGGLKRLVLEAVTFGSFLWDVESFVDSRYHFVIN

Transcript Sequence

Transcript ID

VIT_17s0119g00070.t01
Transcript Infomation

cdna chromosome:12X:17:13300012:13308117:-1 gene:VIT_17s0119g00070 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CATCAACTCTTTCCGGGTTTGCTTCATTTTTTAGGTTTTGAGTTTCTGATTTTCTCCTTC
AGCTTTGAAGAACATGGAAGCTGTCATTGCCACTGTTGTTCCATCTTCTTTCGGATTCTC
CAGGCCTACCGATTCCATTTCCAGATCGACTGTTTTCAATGTCAATAGATCCAATTCTGT
GCGCTTCCCCACCCAATTTCGCTTCTTCAGTGGGTGGCTTAATTTGAAGTCTGGACATAG
GAACATGGCTTTTGGATGCAAGAAATGCACAATAGTTAGAGCATCAGCATCTGCTGACTC
ATCCGGATCAGCTGCTCCAATTGCCCCACTTCAGCTGGAATCTCCAATTGGTCAGTTTTT
GTCTCAGATCTTGATAAGCCACCCACATCTTGTACCTGCTGCTGTTGAACAGCAGCTTGA
GCAGCTTCAAACAGACCGTGATGCTGAGGAACACAAGGAAGAGTCTTCAGCTTCTGGCAC
TGAGTTAGTATTATACAGGAGGATTGCGGAAGTTAAGGCTAATGAAAGGAAAAAAGCTCT
TGAAGAAATCTTGTATGCGTTGGTTGTGCAGAAATTTATGGATGCCAATGTTTCTTTGAT
ACCCACAATAAGCTCCTCTTCTTCGGACTCGTCTGACCGAGTAGACACATGGCCAAGCCA
AGATGGGAAGCTTGAGCAGCTTCACTCTCCTGAAGCCTATGAGATGATCCAGAATCACCT
AGCTCTCATTTTGGGGAACCGCTTAGGTGATTCAACCTCAGTGGCTCAGATAAGCAAACT
CAGGGTTGGGCAGGTCTATGCAGCATCGGTGATGTATGGTTACTTCCTTAAGCGGGTAGA
TCAGAGGTTTCAGCTTGAGAAGACAATGAAAATACTTCCACATGCATTGGATGGGGACAA
GGGTTCTGTTCAGGAAGCCTTGTGGGATAAGATGACTCCCTCTGGCAGTGATGACTCTGT
CCAAACTGTAAAATCCCACCCTGAGGTCTCATCTTGGGCTGGTGGCTTCACCCCTGGTGG
TTTTGGTCATGGGATAAAACCCTCCCGACTTAGAAACTATGTGATGTCTTTTGATGCAGA
GACACTACAGAGGTATGCAACAATAAGATCCAAGGAGGCTGTCAGCATCATTGAGAAGCA
CACAGAGGCATTGTTTGGAAGACCTGAGATTATTATAACTCCTCAGGGAACAATTGATTC
TTCCAAGGATGAACTCATCAAGATTAGCTTCGGTGGTTTAAAGAGACTTGTTCTGGAGGC
TGTGACTTTTGGTTCTTTTCTCTGGGATGTTGAGAGCTTTGTGGACTCGAGGTACCATTT
TGTTATAAACTAAGTTCTCTGTGCTTGCGTCCATGTCAGAAATAAGCTTGGTAAAGAAGG
CATTAATTGACCAGCTTAAATTGTATGACTCAGTGTAAATTTGGAGCTAAGTGGAATCAT
ATTACACTAATTGAGCTGTATATATTCATGCAATTTCTAATTTATTTGAAGGATCTTAAA
CA