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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0053g00610.t01
CDS Infomation

cds chromosome:12X:17:15631827:15632949:-1 gene:VIT_17s0053g00610 gene_biotype:protein_coding transcript_biotype:protein_coding description:Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:F6HVU0]
Sequence

ATGCAAGTGAAGCTGGTTGAAGGTGATTCAGCCGGAACAGTCACAGCCTTATATATGGCA
TCAGAAGGGCTTAACCATGATGAACTAGATTTTGAATTCCTGGGAAATGTGTCTGGAGAA
CCATACCTTGTTCAGACAAACGTTTATGTGAACGGGACTGGAAATAGAGAGCAGAGGCAC
ACGCTTTGGTTTGATCCCACTGCTGCCTTCCATACCTACTCTTTCCTCTGGAATCGCTAT
TCCATTCTATTTCTTGTGGATGAAGTCCCAATTCGGGTATTTGCAAACAAGGAAGAAAAT
GGTGCACCATACCCGAAAACCCAAGCCATGGGGGTCCAGGGCTCGGTGTGGAATGCAGAC
GACTGGGCCACACAGGGAGGGAGGGTGAAGACCAATTGGAGCCATGCCCCATTTGTCTCA
ACTTTTAGAGGCTTTGAGATTGATGCTTGTGAGTTGAGTCCTGAGACAGATGATATTGCT
AGTAGTAAGTGTGGAAGAGTAGGGGAGTTTTGGTGGGATAAGCCGAGGATGAGTGGGCTC
AATAGGCACAAGAGCCACCAACTCAAGTGGGTTCGTAGAAGGCACTTGGTGTATGACTAT
TGCATGGATAGTGGGAGGTTCTATGAAATGCCTAGGGAGTGCATTGTTTGA

Peptide Sequence

PEP ID

VIT_17s0053g00610.t01
PEP Infomation

pep chromosome:12X:17:15631827:15632949:-1 gene:VIT_17s0053g00610 transcript:VIT_17s0053g00610.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:F6HVU0]
Sequence

MQVKLVEGDSAGTVTALYMASEGLNHDELDFEFLGNVSGEPYLVQTNVYVNGTGNREQRH
TLWFDPTAAFHTYSFLWNRYSILFLVDEVPIRVFANKEENGAPYPKTQAMGVQGSVWNAD
DWATQGGRVKTNWSHAPFVSTFRGFEIDACELSPETDDIASSKCGRVGEFWWDKPRMSGL
NRHKSHQLKWVRRRHLVYDYCMDSGRFYEMPRECIV

Transcript Sequence

Transcript ID

VIT_17s0053g00610.t01
Transcript Infomation

cdna chromosome:12X:17:15631827:15632949:-1 gene:VIT_17s0053g00610 gene_biotype:protein_coding transcript_biotype:protein_coding description:Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:F6HVU0]
Sequence

GGATGCGGATTTGAATCCAAGAAAAAGTACTTATTTGGAAAAGTGAGTATGCAAGTGAAG
CTGGTTGAAGGTGATTCAGCCGGAACAGTCACAGCCTTATATATGGCATCAGAAGGGCTT
AACCATGATGAACTAGATTTTGAATTCCTGGGAAATGTGTCTGGAGAACCATACCTTGTT
CAGACAAACGTTTATGTGAACGGGACTGGAAATAGAGAGCAGAGGCACACGCTTTGGTTT
GATCCCACTGCTGCCTTCCATACCTACTCTTTCCTCTGGAATCGCTATTCCATTCTATTT
CTTGTGGATGAAGTCCCAATTCGGGTATTTGCAAACAAGGAAGAAAATGGTGCACCATAC
CCGAAAACCCAAGCCATGGGGGTCCAGGGCTCGGTGTGGAATGCAGACGACTGGGCCACA
CAGGGAGGGAGGGTGAAGACCAATTGGAGCCATGCCCCATTTGTCTCAACTTTTAGAGGC
TTTGAGATTGATGCTTGTGAGTTGAGTCCTGAGACAGATGATATTGCTAGTAGTAAGTGT
GGAAGAGTAGGGGAGTTTTGGTGGGATAAGCCGAGGATGAGTGGGCTCAATAGGCACAAG
AGCCACCAACTCAAGTGGGTTCGTAGAAGGCACTTGGTGTATGACTATTGCATGGATAGT
GGGAGGTTCTATGAAATGCCTAGGGAGTGCATTGTTTGA