Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0053g00380.t01
CDS Infomation

cds chromosome:12X:17:14981224:14986219:-1 gene:VIT_17s0053g00380 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATCACAAAAGAGATGAAGAGAATGGTTTGGATGGAAACTACAATTCAGAAGTGGAA
ACTGAACACATGAAGAAGATGGAGAAGGAGAACCAAGAAGAAAAAGAAGAAGAAGAAGAA
GAAGAAGAGATGTCGGTGGAGCGGATTTTTGAAGGCAAGGAAGTACCATCATGGAGAGAA
CAGCTGACAGTGAGGGCCTTCGTGGTGAGCTTCGTACTGTCAGTGCTCTTCACCTTCATA
GTGATGAAACTCAACCTCACCACTGGTATCATCCCTTCCCTCAACGTCTCTGCGGGGCTC
TTGGGTTTCTTCTTCGTCTCGGTTTGGACAAAGTTTCTTGACAAGTCTGGGCTCTTGAAG
CAGCCCTTCACTCGACAAGAGAACACTGTTATCCAGACTTGCGTCGTGGCCTCCTCTGGC
ATCGCCTTCAGCGGAGGTTTTGGAAGCTACCTTTTCGGAATGAGTCAAGCTATTGCTAAA
CAATCTGAAAATGCTGGAGGCAACGAGGAATATAAGAACCCAGCAGTAGCATGGATGATT
GGCTTTCTCTTTGTTGTTAGCTTTCTTGGCCTCTTTTCTGTCGTGCCTCTTCGAAAGATC
ATGATTGTAGACTTCAAATTGACATACCCAAGTGGTACTGCAACTGCTCATCTCATCAAC
AGTTTTCACACTCCTCAAGGAGCCAAGTTGGCAAAGAAACAAGTTAGAGTATTGGGCAAG
TACTTCTCCTTCAGCTTCTTGTGGGGTTTCTTCCAATGGTTTTTTGCTGCTGGAGACAAT
TGCGGATTTGCAGGCTTCCCTACGTTTGGACTTAAAGCATACAAATACAAGTTTTTCTTT
GATTTCTCGGCAACTTATGTTGGAGTGGGGATGATTTGTCCGCATATAGTAAACATATCG
CTGCTGGTTGGAGGAATTCTTTCTTGGGGAGTTATGTGGCCGCTTATAGAAACTAGAAAG
GGTGATTGGTACCCTGCAGACCTTCCCTCAAGCAACATTCGTGGTCTTCAAGGTTACAAG
ATATTCATCGCCATTGCAACAATCCTAGGTGACGGGCTATATAACTTTTTCAAGGTACTG
GGTCAAACTCTCTTGGGATTGTTTTACCAACTCCAATACAAAAATATGAGCGGTGTCCCA
CCCATTGAGGATCGCTCCTCTCCTAGGAGCTCATCTACTTCTTACAATGATACTCGTCGG
ACACAAGTTTTCCTCAAAGATCAAATTCCGACATCATTTGCTATTGGAGGGTACATTGCA
ATAGCTGCAATCTCCATGGCCACACTTCCTCACATATTTCCCCAACTCAAATGGTACTAC
ATACTGGTTATCTATCTTGTTGCTCCTACCATGGCGTTTTGCAATGCATATGGGTGTGGG
CTCACTGACTGGTCTCTTGCATCCACCTATGGGAAGCTTGCCATCTTTAGCATTGGAGCA
TGGGCTGGTGCTGCACATGGTGGAGTTATAGCAGGCCTGGCAGCCTGTGGAGTTATGATG
AACATTGTATCAACCGCTTCCGACCTAATGCAGGATTTCAAGACTGGTTATCTAACCTTA
GCTTCACCACGCTCAATGTTTGTGAGCCAATTCATTGGTACTGCAATGGGTTGTGTCATC
TCCCCTTGTGTCTTTTGGCTGTTCTACAAGGCTTTTGATGACCTTGGGCAGAGTGGAAGT
GAATACCCTGCTCCTTATGCTCTGGTCTACCACAACATGGCTGTTCTTGGGGTAGAGGGC
ATCTCCAATTTACCAAAGAACTGTTTCACGCTTTGTTGTGTGTTTTTTGGTGCAGCAATT
CTCGTGAATTTGGTTAGGGATGCTGTAGGTCGAAAGAGGGCGCAGTTCATTCCAATCCCA
ATGGCAATGGCAATACCATTTTATCTGGGCCCTTACTTCGCCATTGATATGTGTGTTGGT
AGCTTAATATTATTTATATGGCAAAGGATAAACAAAGCTAAGGCAGAAGCTTTTGGACCT
GCAGTAGCTTCTGGCTTGATTTGTGGAGAGGGAATATGGACTCTGCCTGGTTCAATTCTT
GCTTTAGCAGGAATAAAGCAACCAATTTGCATGAAGTTCCTGTCTAGGGCAACAAATGCC
AGGGTTGATAAGTTCCTAGGGGCTTAA

Peptide Sequence

PEP ID

VIT_17s0053g00380.t01
PEP Infomation

pep chromosome:12X:17:14981224:14986219:-1 gene:VIT_17s0053g00380 transcript:VIT_17s0053g00380.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDHKRDEENGLDGNYNSEVETEHMKKMEKENQEEKEEEEEEEEMSVERIFEGKEVPSWRE
QLTVRAFVVSFVLSVLFTFIVMKLNLTTGIIPSLNVSAGLLGFFFVSVWTKFLDKSGLLK
QPFTRQENTVIQTCVVASSGIAFSGGFGSYLFGMSQAIAKQSENAGGNEEYKNPAVAWMI
GFLFVVSFLGLFSVVPLRKIMIVDFKLTYPSGTATAHLINSFHTPQGAKLAKKQVRVLGK
YFSFSFLWGFFQWFFAAGDNCGFAGFPTFGLKAYKYKFFFDFSATYVGVGMICPHIVNIS
LLVGGILSWGVMWPLIETRKGDWYPADLPSSNIRGLQGYKIFIAIATILGDGLYNFFKVL
GQTLLGLFYQLQYKNMSGVPPIEDRSSPRSSSTSYNDTRRTQVFLKDQIPTSFAIGGYIA
IAAISMATLPHIFPQLKWYYILVIYLVAPTMAFCNAYGCGLTDWSLASTYGKLAIFSIGA
WAGAAHGGVIAGLAACGVMMNIVSTASDLMQDFKTGYLTLASPRSMFVSQFIGTAMGCVI
SPCVFWLFYKAFDDLGQSGSEYPAPYALVYHNMAVLGVEGISNLPKNCFTLCCVFFGAAI
LVNLVRDAVGRKRAQFIPIPMAMAIPFYLGPYFAIDMCVGSLILFIWQRINKAKAEAFGP
AVASGLICGEGIWTLPGSILALAGIKQPICMKFLSRATNARVDKFLGA

Transcript Sequence

Transcript ID

VIT_17s0053g00380.t01
Transcript Infomation

cdna chromosome:12X:17:14981224:14986219:-1 gene:VIT_17s0053g00380 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AATTCGTCCCCAGTTTGAAAAACAGAGAAGAAATGGATCACAAAAGAGATGAAGAGAATG
GTTTGGATGGAAACTACAATTCAGAAGTGGAAACTGAACACATGAAGAAGATGGAGAAGG
AGAACCAAGAAGAAAAAGAAGAAGAAGAAGAAGAAGAAGAGATGTCGGTGGAGCGGATTT
TTGAAGGCAAGGAAGTACCATCATGGAGAGAACAGCTGACAGTGAGGGCCTTCGTGGTGA
GCTTCGTACTGTCAGTGCTCTTCACCTTCATAGTGATGAAACTCAACCTCACCACTGGTA
TCATCCCTTCCCTCAACGTCTCTGCGGGGCTCTTGGGTTTCTTCTTCGTCTCGGTTTGGA
CAAAGTTTCTTGACAAGTCTGGGCTCTTGAAGCAGCCCTTCACTCGACAAGAGAACACTG
TTATCCAGACTTGCGTCGTGGCCTCCTCTGGCATCGCCTTCAGCGGAGGTTTTGGAAGCT
ACCTTTTCGGAATGAGTCAAGCTATTGCTAAACAATCTGAAAATGCTGGAGGCAACGAGG
AATATAAGAACCCAGCAGTAGCATGGATGATTGGCTTTCTCTTTGTTGTTAGCTTTCTTG
GCCTCTTTTCTGTCGTGCCTCTTCGAAAGATCATGATTGTAGACTTCAAATTGACATACC
CAAGTGGTACTGCAACTGCTCATCTCATCAACAGTTTTCACACTCCTCAAGGAGCCAAGT
TGGCAAAGAAACAAGTTAGAGTATTGGGCAAGTACTTCTCCTTCAGCTTCTTGTGGGGTT
TCTTCCAATGGTTTTTTGCTGCTGGAGACAATTGCGGATTTGCAGGCTTCCCTACGTTTG
GACTTAAAGCATACAAATACAAGTTTTTCTTTGATTTCTCGGCAACTTATGTTGGAGTGG
GGATGATTTGTCCGCATATAGTAAACATATCGCTGCTGGTTGGAGGAATTCTTTCTTGGG
GAGTTATGTGGCCGCTTATAGAAACTAGAAAGGGTGATTGGTACCCTGCAGACCTTCCCT
CAAGCAACATTCGTGGTCTTCAAGGTTACAAGATATTCATCGCCATTGCAACAATCCTAG
GTGACGGGCTATATAACTTTTTCAAGGTACTGGGTCAAACTCTCTTGGGATTGTTTTACC
AACTCCAATACAAAAATATGAGCGGTGTCCCACCCATTGAGGATCGCTCCTCTCCTAGGA
GCTCATCTACTTCTTACAATGATACTCGTCGGACACAAGTTTTCCTCAAAGATCAAATTC
CGACATCATTTGCTATTGGAGGGTACATTGCAATAGCTGCAATCTCCATGGCCACACTTC
CTCACATATTTCCCCAACTCAAATGGTACTACATACTGGTTATCTATCTTGTTGCTCCTA
CCATGGCGTTTTGCAATGCATATGGGTGTGGGCTCACTGACTGGTCTCTTGCATCCACCT
ATGGGAAGCTTGCCATCTTTAGCATTGGAGCATGGGCTGGTGCTGCACATGGTGGAGTTA
TAGCAGGCCTGGCAGCCTGTGGAGTTATGATGAACATTGTATCAACCGCTTCCGACCTAA
TGCAGGATTTCAAGACTGGTTATCTAACCTTAGCTTCACCACGCTCAATGTTTGTGAGCC
AATTCATTGGTACTGCAATGGGTTGTGTCATCTCCCCTTGTGTCTTTTGGCTGTTCTACA
AGGCTTTTGATGACCTTGGGCAGAGTGGAAGTGAATACCCTGCTCCTTATGCTCTGGTCT
ACCACAACATGGCTGTTCTTGGGGTAGAGGGCATCTCCAATTTACCAAAGAACTGTTTCA
CGCTTTGTTGTGTGTTTTTTGGTGCAGCAATTCTCGTGAATTTGGTTAGGGATGCTGTAG
GTCGAAAGAGGGCGCAGTTCATTCCAATCCCAATGGCAATGGCAATACCATTTTATCTGG
GCCCTTACTTCGCCATTGATATGTGTGTTGGTAGCTTAATATTATTTATATGGCAAAGGA
TAAACAAAGCTAAGGCAGAAGCTTTTGGACCTGCAGTAGCTTCTGGCTTGATTTGTGGAG
AGGGAATATGGACTCTGCCTGGTTCAATTCTTGCTTTAGCAGGAATAAAGCAACCAATTT
GCATGAAGTTCCTGTCTAGGGCAACAAATGCCAGGGTTGATAAGTTCCTAGGGGCTTAAG
ACTTATCAAAATTTACCTATGAAGGATGATCTGTAAGGTTTATACTTGCAACTAGTTGTA
CCATGAATCTCTTTACTATTTTGTTTCTTTCCTTTTAGATGATGGCTAAGTTACTCCTAA
TACAGAATGTTTATG