Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0053g00090.t01
CDS Infomation

cds chromosome:12X:17:14509258:14517807:-1 gene:VIT_17s0053g00090 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCGATGGCTTCCAGTTCCGGTTGCATCGTTCTTGTCGGAACCACCTCCGCTGTGGAA
TCATCCTCCGCCGGCTTCGGCGGTTGTTCTTCTCCTGTCGTTCTTCAATTTGATGTCGCT
TTGGGTGGAAGCAATGGTGGCGGTTTGAGTAGGGTTTGTAGGGTTCGAATCGGGGTCCGG
TCAGGGAGGCGATGGAGATCGCGGGCGATTCGTGAGTTGCATCAGCAGAAGAATCAGATT
CATGGTGGCCCTGGTAATGCAGCTCCGACCACCACTGTTGAAATTCCGGTTTCTTGTTAC
CAGATTGTTGGTGTTCCTGATCAAGCAGAAAAAGATGAGATTGTTAAGTCAGTGATGGTA
CTGAAAAATGCTGAGGTTGAGGAAGGCTATACAATGGAGACCGTTATGTCACGCCAGGAT
CTTTTAATGGATGTGAGGGATAAACTTCTTTTTGAACCAGAATATGCCGGTAATGTGAAG
GAGAAGATCCCACCTAAATCTGCCCTTCGAATTCCGTGGGCTTGGTTGCCTGGAGCTCTT
TGCCTCCTTCAAGAGGTTGGAGAAGAGAAACTTGTGCTGGATATTGGCCGAAGAGCACTC
CAGCATCCAGATGCTAAGCCATATATTCATGATTTGATTCTATCTATGGCACTAGCAGAG
TGTGCAATTGCAAAGATTGGTTTCGAGAAGAACAAAGTATCTTATGGATTTGAAGCTCTT
GCTCGTGCTCAGTGTCTTCTTAGGAGCAAAATGTCTCTTGGGAAAATGGCATTGTTATCT
CAGATAGAAGAATCTTTGGAGGAGCTTGCACCTGCTTGCACATTGGAATTGCTAGGCATG
CCTTACATACCTGAAAATACTGAACGGAGACGGGGAGCAATTGCAGCCCTGTGTGAATTG
CTCAGGCAGGGTCTTGATGTAGAAACTTCATGCCAAGTCCAAGATTGGCCATGCTTCTTG
AGCCGGGCACTCAACAGGCTCATGGTCATGGAAATAATTGATCTTCTTCCATGGGATAAT
TTAGCCGTTACACGGAAGAATAAAAAATCACTTGAATCTCAGAATCAAAGGGTTGTAATT
GATTTTAATTGTTTCTACATGGTGTTAATCGCTCATATTGCTCTTGGGTTTTCAAGCAAA
CAAGCAGATTTGATCAACAAAGCAAAAGTGATATGCGAATGTTTGATAGCTTCAGATGGC
GTTGATCTAAAATTTGAGGAAGCCTTTTGCTCATTCCTTCTTGGACAGGGTGATCAAGCA
GAGGCTGTTGAAAGGCTTCGGCAGCTTGAATCTGGTTCAAATACTGCTTCACGAAATTCA
ATTCCAGGAAAGGAAATTAAAGATTCTTCCAATGCAAACCCATCATTGGAGTTGTGGTTG
AAGGAGGCTGTGCTTAGTGTTTTTCCTGATACACGAGATTGTTCTCCGTCTTTGGCCAGT
TTTTTTGGTGCTGAAAAAAGAACTCCTCGGAACAGGCAAACTAAAGGAGCCCTACTGACC
GTTCCTAGTGTAAACCACAGACCAATATCTACTGCTCTTGCATCTGATCGGAGAGATATT
GAGGAACCTCTTTCATATAAGAACTCTTCTCGACATCTTGGGTCAGCTGTAAAGCAGTTG
GCTCCAGCTGATTTGCAAAGCCCTTTAATATTGGGCAAGAATGGTAATGAAAGTGATATT
AACCCACCATCTGTTCAACTGAAAAGAAATCTTGGGGCATACCATAGTAAAGTGTGGGAA
AATTGGTTGACCACTAGAGATGTAGTTGGAAGGGTAACCTTTGTAACAGTATTAGGGTGT
GTTGTACTCATGACCTTTAAGCTCTCAGGTCTGAAGTTTGGGAGAATGAGGACTACATCT
AGATTGGCCTCCCACAAATCAATTGTGGAGACAAGTTCTCTTGCCCGGACAACGGATCCT
TCTCTAGATTGCAGAAGTAGCATCACTTACAAACTCAAGAAGCTGCTGGTGAAGGTTACA
AAGCAACTCAGGAACCGCTCAGATGGTGGGAACCTGCAAAGTTCAGGCCTTGCTGCCAAT
CTATCATCCTCCATGGCAGCAGTGGACAGGAGTCCAATGCCTATGCAAGAAGCTGAGATG
CTTGTCAAGCAATGGCAAGCCGCTAAAGCTCAAGCTCTTGGTCCTAGCCATCAGATTGAT
AGCCTGTCTGAAGTCCTTGATGATTCAATGCTGGTTCAGTGGCAAGCTCTAGCTGATGCA
GCAAGACTTAAGTCTTGTTTCTGGAGATTTGTTTTACTGCAATTGTCTGTTATTCGGGCT
GATATTTTATCAGATAGCACTGGCATTGAGATGGCAGAAATAGAGGCTCTCCTAGAAGAA
GCAGCAGAGCTTGTTGATGAATCTCAGCCAAAGAACCCGAATTATTACAGCACATATAAA
GTCCGTTATCTTCTGAGACGACAAGATGATGGTTCATGGAGATTTTGTGAAGGCGATATT
CAAATACCATGCTGA

Peptide Sequence

PEP ID

VIT_17s0053g00090.t01
PEP Infomation

pep chromosome:12X:17:14509258:14517807:-1 gene:VIT_17s0053g00090 transcript:VIT_17s0053g00090.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSMASSSGCIVLVGTTSAVESSSAGFGGCSSPVVLQFDVALGGSNGGGLSRVCRVRIGVR
SGRRWRSRAIRELHQQKNQIHGGPGNAAPTTTVEIPVSCYQIVGVPDQAEKDEIVKSVMV
LKNAEVEEGYTMETVMSRQDLLMDVRDKLLFEPEYAGNVKEKIPPKSALRIPWAWLPGAL
CLLQEVGEEKLVLDIGRRALQHPDAKPYIHDLILSMALAECAIAKIGFEKNKVSYGFEAL
ARAQCLLRSKMSLGKMALLSQIEESLEELAPACTLELLGMPYIPENTERRRGAIAALCEL
LRQGLDVETSCQVQDWPCFLSRALNRLMVMEIIDLLPWDNLAVTRKNKKSLESQNQRVVI
DFNCFYMVLIAHIALGFSSKQADLINKAKVICECLIASDGVDLKFEEAFCSFLLGQGDQA
EAVERLRQLESGSNTASRNSIPGKEIKDSSNANPSLELWLKEAVLSVFPDTRDCSPSLAS
FFGAEKRTPRNRQTKGALLTVPSVNHRPISTALASDRRDIEEPLSYKNSSRHLGSAVKQL
APADLQSPLILGKNGNESDINPPSVQLKRNLGAYHSKVWENWLTTRDVVGRVTFVTVLGC
VVLMTFKLSGLKFGRMRTTSRLASHKSIVETSSLARTTDPSLDCRSSITYKLKKLLVKVT
KQLRNRSDGGNLQSSGLAANLSSSMAAVDRSPMPMQEAEMLVKQWQAAKAQALGPSHQID
SLSEVLDDSMLVQWQALADAARLKSCFWRFVLLQLSVIRADILSDSTGIEMAEIEALLEE
AAELVDESQPKNPNYYSTYKVRYLLRRQDDGSWRFCEGDIQIPC

Transcript Sequence

Transcript ID

VIT_17s0053g00090.t01
Transcript Infomation

cdna chromosome:12X:17:14509258:14517807:-1 gene:VIT_17s0053g00090 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCGATGGCTTCCAGTTCCGGTTGCATCGTTCTTGTCGGAACCACCTCCGCTGTGGAA
TCATCCTCCGCCGGCTTCGGCGGTTGTTCTTCTCCTGTCGTTCTTCAATTTGATGTCGCT
TTGGGTGGAAGCAATGGTGGCGGTTTGAGTAGGGTTTGTAGGGTTCGAATCGGGGTCCGG
TCAGGGAGGCGATGGAGATCGCGGGCGATTCGTGAGTTGCATCAGCAGAAGAATCAGATT
CATGGTGGCCCTGGTAATGCAGCTCCGACCACCACTGTTGAAATTCCGGTTTCTTGTTAC
CAGATTGTTGGTGTTCCTGATCAAGCAGAAAAAGATGAGATTGTTAAGTCAGTGATGGTA
CTGAAAAATGCTGAGGTTGAGGAAGGCTATACAATGGAGACCGTTATGTCACGCCAGGAT
CTTTTAATGGATGTGAGGGATAAACTTCTTTTTGAACCAGAATATGCCGGTAATGTGAAG
GAGAAGATCCCACCTAAATCTGCCCTTCGAATTCCGTGGGCTTGGTTGCCTGGAGCTCTT
TGCCTCCTTCAAGAGGTTGGAGAAGAGAAACTTGTGCTGGATATTGGCCGAAGAGCACTC
CAGCATCCAGATGCTAAGCCATATATTCATGATTTGATTCTATCTATGGCACTAGCAGAG
TGTGCAATTGCAAAGATTGGTTTCGAGAAGAACAAAGTATCTTATGGATTTGAAGCTCTT
GCTCGTGCTCAGTGTCTTCTTAGGAGCAAAATGTCTCTTGGGAAAATGGCATTGTTATCT
CAGATAGAAGAATCTTTGGAGGAGCTTGCACCTGCTTGCACATTGGAATTGCTAGGCATG
CCTTACATACCTGAAAATACTGAACGGAGACGGGGAGCAATTGCAGCCCTGTGTGAATTG
CTCAGGCAGGGTCTTGATGTAGAAACTTCATGCCAAGTCCAAGATTGGCCATGCTTCTTG
AGCCGGGCACTCAACAGGCTCATGGTCATGGAAATAATTGATCTTCTTCCATGGGATAAT
TTAGCCGTTACACGGAAGAATAAAAAATCACTTGAATCTCAGAATCAAAGGGTTGTAATT
GATTTTAATTGTTTCTACATGGTGTTAATCGCTCATATTGCTCTTGGGTTTTCAAGCAAA
CAAGCAGATTTGATCAACAAAGCAAAAGTGATATGCGAATGTTTGATAGCTTCAGATGGC
GTTGATCTAAAATTTGAGGAAGCCTTTTGCTCATTCCTTCTTGGACAGGGTGATCAAGCA
GAGGCTGTTGAAAGGCTTCGGCAGCTTGAATCTGGTTCAAATACTGCTTCACGAAATTCA
ATTCCAGGAAAGGAAATTAAAGATTCTTCCAATGCAAACCCATCATTGGAGTTGTGGTTG
AAGGAGGCTGTGCTTAGTGTTTTTCCTGATACACGAGATTGTTCTCCGTCTTTGGCCAGT
TTTTTTGGTGCTGAAAAAAGAACTCCTCGGAACAGGCAAACTAAAGGAGCCCTACTGACC
GTTCCTAGTGTAAACCACAGACCAATATCTACTGCTCTTGCATCTGATCGGAGAGATATT
GAGGAACCTCTTTCATATAAGAACTCTTCTCGACATCTTGGGTCAGCTGTAAAGCAGTTG
GCTCCAGCTGATTTGCAAAGCCCTTTAATATTGGGCAAGAATGGTAATGAAAGTGATATT
AACCCACCATCTGTTCAACTGAAAAGAAATCTTGGGGCATACCATAGTAAAGTGTGGGAA
AATTGGTTGACCACTAGAGATGTAGTTGGAAGGGTAACCTTTGTAACAGTATTAGGGTGT
GTTGTACTCATGACCTTTAAGCTCTCAGGTCTGAAGTTTGGGAGAATGAGGACTACATCT
AGATTGGCCTCCCACAAATCAATTGTGGAGACAAGTTCTCTTGCCCGGACAACGGATCCT
TCTCTAGATTGCAGAAGTAGCATCACTTACAAACTCAAGAAGCTGCTGGTGAAGGTTACA
AAGCAACTCAGGAACCGCTCAGATGGTGGGAACCTGCAAAGTTCAGGCCTTGCTGCCAAT
CTATCATCCTCCATGGCAGCAGTGGACAGGAGTCCAATGCCTATGCAAGAAGCTGAGATG
CTTGTCAAGCAATGGCAAGCCGCTAAAGCTCAAGCTCTTGGTCCTAGCCATCAGATTGAT
AGCCTGTCTGAAGTCCTTGATGATTCAATGCTGGTTCAGTGGCAAGCTCTAGCTGATGCA
GCAAGACTTAAGTCTTGTTTCTGGAGATTTGTTTTACTGCAATTGTCTGTTATTCGGGCT
GATATTTTATCAGATAGCACTGGCATTGAGATGGCAGAAATAGAGGCTCTCCTAGAAGAA
GCAGCAGAGCTTGTTGATGAATCTCAGCCAAAGAACCCGAATTATTACAGCACATATAAA
GTCCGTTATCTTCTGAGACGACAAGATGATGGTTCATGGAGATTTTGTGAAGGCGATATT
CAAATACCATGCTGATATTCAACCAAGTTCTGGGATAAAATTAGCCGAC