Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g10300.t01
CDS Infomation

cds chromosome:12X:17:12556730:12558304:-1 gene:VIT_17s0000g10300 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTTCTGATCTGTTGAGTGAAGAAAGGAGTGATGAGGTGAGTGGTCTTGATACCAGC
CTTTCGGCTCAGGCTTACTATTCTCGCTCTTATCTGCCCATATTCCAGAATGGTTCTGCT
ACTAATTGGTTCCACTACTCGGATGAAGCTAGAAACCACAAGAGGCTTAAACGAACCCAA
AGTATAGCTGAATCCATCGGAAGTAATAGCAGCCTTTATAGTGGTGGAAAAAGCTATAGT
AACAGCAGCAGCAGTTTTATCAACCGCAGTAGCAGTACTAATAGCTTGAATAGCTTGCCA
AGGCTCCATTTTCGAGATCATATATGGACTTATACTCAAAGATACCTTGCAGCTGAAGCT
GTGGAAGAAGCAGCAGCAGCCATGATCAGTGCTGCAGAAGGTGAAGTTGAGGAAGATGGA
AGTGGGGACGGGATGAGGTTGGTTCAGCTTCTCATTGCTTGTGCTGAAGCTGTGGCTTGT
CGTGACAAGACACATGCCTCATCGCTATTATCAGAGCTTCGAGCCAATGCTTTAGTCTTC
GGCTCTTCATTCCAGCGTGTGGCATCCTGCTTTGTCCAAGGCCTCGCGGACCGGCTGTCT
TTGGTTCAACCACTTGGGGCAGTTGGTTTTATAGCACCGTCCATCAACCCATTGGACACA
GCCTGGGAGAAAAAGGAGGAAGCCTTACGTCTTGTTTATGAAATTTGCCCACATATTAAG
TTTGGTCACTTTGTGGCCAATGCTTCAATATTGGAAGCCTTTGAGGGAGAGAATTTTGCC
CATGTCGTTGACTTGGGCATGACACTTGGCCTAGCACATGGTCAGCAATGGCGCCAGCTG
ATCCATAGCCTAGCCAATCGTGCAGGCCGACCACCACGTCGTCTTAGGATCACTGGTGTC
GGCCTTTGTGTAGACCGGTTCAAAATTATAGGTGAGGAGCTTGAGGCTTACGCCCAGGAC
TTGGACATAAACTTGGAGTTTTCAGCAGTGGAAAGCAACTTGGAAAATCTTCGGCCTGAA
GACATCAAACGTGAAGATGGGGAAGCTCTTGTTGTCAACAGCATCCTTCAATTGCACTGT
GTGGTCAAGGAAAGCCGCGGAGCTTTAAACTCGGTCCTGCAGAAAATCAACGAGCTCTCA
CCCAAGGTTTTAGTCCTGGTTGAGCAGGACTCAAGCCATAACGGACCCTTCTTTCTTGGG
AGGTTCATGGAAGCACTTCATTACTACTCTGCAATCTTTGACTCCCTAGAAGCAATGCTA
CCTAAGTATGATACTAGGCGCGCCAAAATAGAACAGTTTTACTTTGGGGAGGAGATAAAG
AACATAGTGAGTTGCGAAGGGCCAGCAAGGGTGGAGCGGCATGAGAGGGTGGACCAGTGG
CGCAGGAGGATGAGTCGTGCCGGGTTTCAGGCTGCACCCATTAAGATGATGGCTCAGGCC
AAGCAATGGCTGGGGAAAGTTAAGGCCTGTGAAGGGTATAATATTATGGAAGAGAAGGGA
TGCTTGGTGCTGGGCTGGAAATCAAAGCCTATTGTGGCAGCCTCTTGCTGGAAATGCTGA

Peptide Sequence

PEP ID

VIT_17s0000g10300.t01
PEP Infomation

pep chromosome:12X:17:12556730:12558304:-1 gene:VIT_17s0000g10300 transcript:VIT_17s0000g10300.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MASDLLSEERSDEVSGLDTSLSAQAYYSRSYLPIFQNGSATNWFHYSDEARNHKRLKRTQ
SIAESIGSNSSLYSGGKSYSNSSSSFINRSSSTNSLNSLPRLHFRDHIWTYTQRYLAAEA
VEEAAAAMISAAEGEVEEDGSGDGMRLVQLLIACAEAVACRDKTHASSLLSELRANALVF
GSSFQRVASCFVQGLADRLSLVQPLGAVGFIAPSINPLDTAWEKKEEALRLVYEICPHIK
FGHFVANASILEAFEGENFAHVVDLGMTLGLAHGQQWRQLIHSLANRAGRPPRRLRITGV
GLCVDRFKIIGEELEAYAQDLDINLEFSAVESNLENLRPEDIKREDGEALVVNSILQLHC
VVKESRGALNSVLQKINELSPKVLVLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLEAML
PKYDTRRAKIEQFYFGEEIKNIVSCEGPARVERHERVDQWRRRMSRAGFQAAPIKMMAQA
KQWLGKVKACEGYNIMEEKGCLVLGWKSKPIVAASCWKC

Transcript Sequence

Transcript ID

VIT_17s0000g10300.t01
Transcript Infomation

cdna chromosome:12X:17:12556730:12558304:-1 gene:VIT_17s0000g10300 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTTCTGATCTGTTGAGTGAAGAAAGGAGTGATGAGGTGAGTGGTCTTGATACCAGC
CTTTCGGCTCAGGCTTACTATTCTCGCTCTTATCTGCCCATATTCCAGAATGGTTCTGCT
ACTAATTGGTTCCACTACTCGGATGAAGCTAGAAACCACAAGAGGCTTAAACGAACCCAA
AGTATAGCTGAATCCATCGGAAGTAATAGCAGCCTTTATAGTGGTGGAAAAAGCTATAGT
AACAGCAGCAGCAGTTTTATCAACCGCAGTAGCAGTACTAATAGCTTGAATAGCTTGCCA
AGGCTCCATTTTCGAGATCATATATGGACTTATACTCAAAGATACCTTGCAGCTGAAGCT
GTGGAAGAAGCAGCAGCAGCCATGATCAGTGCTGCAGAAGGTGAAGTTGAGGAAGATGGA
AGTGGGGACGGGATGAGGTTGGTTCAGCTTCTCATTGCTTGTGCTGAAGCTGTGGCTTGT
CGTGACAAGACACATGCCTCATCGCTATTATCAGAGCTTCGAGCCAATGCTTTAGTCTTC
GGCTCTTCATTCCAGCGTGTGGCATCCTGCTTTGTCCAAGGCCTCGCGGACCGGCTGTCT
TTGGTTCAACCACTTGGGGCAGTTGGTTTTATAGCACCGTCCATCAACCCATTGGACACA
GCCTGGGAGAAAAAGGAGGAAGCCTTACGTCTTGTTTATGAAATTTGCCCACATATTAAG
TTTGGTCACTTTGTGGCCAATGCTTCAATATTGGAAGCCTTTGAGGGAGAGAATTTTGCC
CATGTCGTTGACTTGGGCATGACACTTGGCCTAGCACATGGTCAGCAATGGCGCCAGCTG
ATCCATAGCCTAGCCAATCGTGCAGGCCGACCACCACGTCGTCTTAGGATCACTGGTGTC
GGCCTTTGTGTAGACCGGTTCAAAATTATAGGTGAGGAGCTTGAGGCTTACGCCCAGGAC
TTGGACATAAACTTGGAGTTTTCAGCAGTGGAAAGCAACTTGGAAAATCTTCGGCCTGAA
GACATCAAACGTGAAGATGGGGAAGCTCTTGTTGTCAACAGCATCCTTCAATTGCACTGT
GTGGTCAAGGAAAGCCGCGGAGCTTTAAACTCGGTCCTGCAGAAAATCAACGAGCTCTCA
CCCAAGGTTTTAGTCCTGGTTGAGCAGGACTCAAGCCATAACGGACCCTTCTTTCTTGGG
AGGTTCATGGAAGCACTTCATTACTACTCTGCAATCTTTGACTCCCTAGAAGCAATGCTA
CCTAAGTATGATACTAGGCGCGCCAAAATAGAACAGTTTTACTTTGGGGAGGAGATAAAG
AACATAGTGAGTTGCGAAGGGCCAGCAAGGGTGGAGCGGCATGAGAGGGTGGACCAGTGG
CGCAGGAGGATGAGTCGTGCCGGGTTTCAGGCTGCACCCATTAAGATGATGGCTCAGGCC
AAGCAATGGCTGGGGAAAGTTAAGGCCTGTGAAGGGTATAATATTATGGAAGAGAAGGGA
TGCTTGGTGCTGGGCTGGAAATCAAAGCCTATTGTGGCAGCCTCTTGCTGGAAATGCTGA
TCATAGCTGCCCTGT