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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g10280.t01
CDS Infomation

cds chromosome:12X:17:12530668:12532972:-1 gene:VIT_17s0000g10280 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nucleoside diphosphate kinase [Source:UniProtKB/TrEMBL;Acc:D7SHA2]
Sequence

ATGGAGGCCGCTGCAGTGTTGGGAGCGAGACCGTCTGTTTCATCATCTTATCTTCATTCG
CAAACTCAGAGGCATTGCAGCTTATACGTCGTCTCCCAGAAGCCTACCCTGCGCTCCGAC
CACCGCCGCCTAGCAGCTTTCCACTCACCGTCCAATCTTTTCTCATATTCCCCATTTCGT
CCTCATGCTCGCAGCACCAAACCCCGCATCTTCCTTCCCCACTTGGTTGCTTCCATGGAG
CAGGTTGAAGAAACTTACATCATGGTCAAACCCGACGGCGTTCAACGGGGCCTCGTTGGA
GAGATTATTTCTAGGTTTGAGAAGAAGGGTTTCAAGTTAACTGGCTTGAAGCTATTCCAA
TGCCCCAAACAATTGGCTGAGGAGCATTATAAGGATCTCAAGGAAAAGTCATTCTTCCCG
AAACTAATTGAATACATTACTTCTGGTCCGGTTGTTTGTATGGCTTGGGAAGGTGTTGGT
GTTGTTGCTTCAGCACGTAAGCTAATAGGGTCAACAAATCCCCTTCAGGCAGAACCAGGC
ACAATCAGAGGAGACCTTGCAGTTCAAACAGGAAGGAATGTGGTTCACGGGAGTGATAGC
CCTGAGAATGGAAAACGTGAAATATCTCTCTGGTTTAAAGAAGGTGAATTATGTGAATGG
GCACCTGTACAAGCACCATGGCTGAGGGAGTGA

Peptide Sequence

PEP ID

VIT_17s0000g10280.t01
PEP Infomation

pep chromosome:12X:17:12530668:12532972:-1 gene:VIT_17s0000g10280 transcript:VIT_17s0000g10280.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nucleoside diphosphate kinase [Source:UniProtKB/TrEMBL;Acc:D7SHA2]
Sequence

MEAAAVLGARPSVSSSYLHSQTQRHCSLYVVSQKPTLRSDHRRLAAFHSPSNLFSYSPFR
PHARSTKPRIFLPHLVASMEQVEETYIMVKPDGVQRGLVGEIISRFEKKGFKLTGLKLFQ
CPKQLAEEHYKDLKEKSFFPKLIEYITSGPVVCMAWEGVGVVASARKLIGSTNPLQAEPG
TIRGDLAVQTGRNVVHGSDSPENGKREISLWFKEGELCEWAPVQAPWLRE

Transcript Sequence

Transcript ID

VIT_17s0000g10280.t01
Transcript Infomation

cdna chromosome:12X:17:12530668:12532972:-1 gene:VIT_17s0000g10280 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nucleoside diphosphate kinase [Source:UniProtKB/TrEMBL;Acc:D7SHA2]
Sequence

AGAGGAGAGAAAATGGAGGCCGCTGCAGTGTTGGGAGCGAGACCGTCTGTTTCATCATCT
TATCTTCATTCGCAAACTCAGAGGCATTGCAGCTTATACGTCGTCTCCCAGAAGCCTACC
CTGCGCTCCGACCACCGCCGCCTAGCAGCTTTCCACTCACCGTCCAATCTTTTCTCATAT
TCCCCATTTCGTCCTCATGCTCGCAGCACCAAACCCCGCATCTTCCTTCCCCACTTGGTT
GCTTCCATGGAGCAGGTTGAAGAAACTTACATCATGGTCAAACCCGACGGCGTTCAACGG
GGCCTCGTTGGAGAGATTATTTCTAGGTTTGAGAAGAAGGGTTTCAAGTTAACTGGCTTG
AAGCTATTCCAATGCCCCAAACAATTGGCTGAGGAGCATTATAAGGATCTCAAGGAAAAG
TCATTCTTCCCGAAACTAATTGAATACATTACTTCTGGTCCGGTTGTTTGTATGGCTTGG
GAAGGTGTTGGTGTTGTTGCTTCAGCACGTAAGCTAATAGGGTCAACAAATCCCCTTCAG
GCAGAACCAGGCACAATCAGAGGAGACCTTGCAGTTCAAACAGGAAGGAATGTGGTTCAC
GGGAGTGATAGCCCTGAGAATGGAAAACGTGAAATATCTCTCTGGTTTAAAGAAGGTGAA
TTATGTGAATGGGCACCTGTACAAGCACCATGGCTGAGGGAGTGACCTTTTCACAGGAAC
AGTTATCTTGAGCCTTCCAGTTTTGAATGAGTTCTCTCTTCCAATCACTTATATTTTATC
AGATAAATTCTTCATTTGTGTGGCCCCTAACAATTCAATTGAGGCCATGTGAAATTGCCA
TTTTTCCATCTGCGATGTTGTATGAGAAATGTTTGGAAATTTTAAGCTTTAATGCTTTCT
TGTCC