Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g10260.t01
CDS Infomation

cds chromosome:12X:17:12508403:12516342:1 gene:VIT_17s0000g10260 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCCTCCTCTGGATTTCAAAGATTTCCAAGAAAAGCTCTCAACCCATTTCAGGCCTTTT
CACCGCTCCTTCCAGTTCTGGGTGCGAGCGGTTGATATCTACACTGGCTACAAGGTGTTT
CAACTTCGGGTGAGTTTCGTGAAGGATGTGAAGAAGCAGGAGGAAATGTGGGAGGTGCAA
CACGAACTTGCAGCTGAGAAGATATATGCTACGTGCGCTGACCTTGGTGGGTTTTTTCTT
AAGATTGCCCAAATTATTGGAAAGCCTGACTTGGCCCCAGCTGCATGGGTTAGAAGGCTT
GTTACACTGTGTGATCGAGCTCCTGCAACCCCATTTGATGCAATCCAACCTGTGCTGGAG
AAAGAGTTGGGTCAAAGTATTGGTGAAATATTTGAAAGATTTGATGTGGATCCAATTGGT
TCTGCTTCAATTGCACAGGTTCACCGAGCAAGATTGAGAGGTGATAAAAATGATGTTGTT
GTCAAGGTGCAACATCCTGGAGTTCAGGATCTTATGATGACTGATATCCGTAATTTGCAA
GCTTTTGCTTTATACATGCAGAAGACAGATATTAAATTTGACCTTTACTCTGTGACTAAA
GAAATGGAAAAACAGATTGGATATGAATTTGACTTCATTAGGGAGGCTGATGCAATGGAA
AGAATAAAACGTTTTTTGTATGAGAATAACAAAAAGCGTCCTGTTTTGGTGCCACGGGTA
ATACGTGATATGGTGACTAGGAGGGTCTTAGTGATGGAATATATTGATGGAATTCCTATC
CTGAACCTCGGTGATGAAATAGCAAAAAGGGGCATTAATCCGGGTGGTAAGCTCGCAGCA
GCAGCAAAGCAGAAGATCCTTGAAAGTTTGACTATAGCATATGGGCAAATGATACTGAAG
AGTGGTTTCTTCCATGCAGATCCCCATCCTGGAAATATTCTGATCTGCAAAGGTTCAGAG
GCAAGTGGGCAATATAAACTTGTTTTGACCTCCCCAGACAAGTTGAGGATTGGATATGCT
AATTTGATTCTGGCTATTGCTGATAATGACCCAGTAAAGGCATCAGAAAGCTACAGGGAG
CTTGGCATAGAGACCTTAAGCAATTGTAAGGATGAACAAAATGAATTATTCAAGTTGGCC
CAGACAATGTTTGATACAAAACTACCACCTGGAGTAGTGATGCTACAACCTTTTGCAGAA
GATTCTTCAATAAAAAAAGTTGGTGTTCAGGCTTTTCCAGAGGAACTGTTTTCTATCCTT
CGTACGGTTCATCTATTGAGAGGACTTAGTGTTGGCCTTGGAATAAACTACTCATGTGCA
GACCAGTGGAGACCCATTGCAGAAGAAGCCTTGGTTCGTGCAGGTAGATTAAAAGATAAG
GATGTCAAGAGCAGAGCACGTCAAAGCAGCTTCTTCAGAAGAATATTTTCGCAACAGTGA

Peptide Sequence

PEP ID

VIT_17s0000g10260.t01
PEP Infomation

pep chromosome:12X:17:12508403:12516342:1 gene:VIT_17s0000g10260 transcript:VIT_17s0000g10260.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MPPLDFKDFQEKLSTHFRPFHRSFQFWVRAVDIYTGYKVFQLRVSFVKDVKKQEEMWEVQ
HELAAEKIYATCADLGGFFLKIAQIIGKPDLAPAAWVRRLVTLCDRAPATPFDAIQPVLE
KELGQSIGEIFERFDVDPIGSASIAQVHRARLRGDKNDVVVKVQHPGVQDLMMTDIRNLQ
AFALYMQKTDIKFDLYSVTKEMEKQIGYEFDFIREADAMERIKRFLYENNKKRPVLVPRV
IRDMVTRRVLVMEYIDGIPILNLGDEIAKRGINPGGKLAAAAKQKILESLTIAYGQMILK
SGFFHADPHPGNILICKGSEASGQYKLVLTSPDKLRIGYANLILAIADNDPVKASESYRE
LGIETLSNCKDEQNELFKLAQTMFDTKLPPGVVMLQPFAEDSSIKKVGVQAFPEELFSIL
RTVHLLRGLSVGLGINYSCADQWRPIAEEALVRAGRLKDKDVKSRARQSSFFRRIFSQQ

Transcript Sequence

Transcript ID

VIT_17s0000g10260.t01
Transcript Infomation

cdna chromosome:12X:17:12508403:12516342:1 gene:VIT_17s0000g10260 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTGCGGGTGAGTCATGTGTGGTCTCTGTCCATAGCAAATCAGAAAGCATCCATTAAAGGC
TATCTTATTTCTTAATTCTCAGCCACAATTCGTCCAGTACGATATATCACATCGATACGA
AAAGTCAAATTATCAACATGAAAAGCAGTTTGAGAGCTTGACGAAGATTCAGCCCAGTCA
CCAATAGAGAGCTATGCCTCCTCTGGATTTCAAAGATTTCCAAGAAAAGCTCTCAACCCA
TTTCAGGCCTTTTCACCGCTCCTTCCAGTTCTGGGTGCGAGCGGTTGATATCTACACTGG
CTACAAGGTGTTTCAACTTCGGGTGAGTTTCGTGAAGGATGTGAAGAAGCAGGAGGAAAT
GTGGGAGGTGCAACACGAACTTGCAGCTGAGAAGATATATGCTACGTGCGCTGACCTTGG
TGGGTTTTTTCTTAAGATTGCCCAAATTATTGGAAAGCCTGACTTGGCCCCAGCTGCATG
GGTTAGAAGGCTTGTTACACTGTGTGATCGAGCTCCTGCAACCCCATTTGATGCAATCCA
ACCTGTGCTGGAGAAAGAGTTGGGTCAAAGTATTGGTGAAATATTTGAAAGATTTGATGT
GGATCCAATTGGTTCTGCTTCAATTGCACAGGTTCACCGAGCAAGATTGAGAGGTGATAA
AAATGATGTTGTTGTCAAGGTGCAACATCCTGGAGTTCAGGATCTTATGATGACTGATAT
CCGTAATTTGCAAGCTTTTGCTTTATACATGCAGAAGACAGATATTAAATTTGACCTTTA
CTCTGTGACTAAAGAAATGGAAAAACAGATTGGATATGAATTTGACTTCATTAGGGAGGC
TGATGCAATGGAAAGAATAAAACGTTTTTTGTATGAGAATAACAAAAAGCGTCCTGTTTT
GGTGCCACGGGTAATACGTGATATGGTGACTAGGAGGGTCTTAGTGATGGAATATATTGA
TGGAATTCCTATCCTGAACCTCGGTGATGAAATAGCAAAAAGGGGCATTAATCCGGGTGG
TAAGCTCGCAGCAGCAGCAAAGCAGAAGATCCTTGAAAGTTTGACTATAGCATATGGGCA
AATGATACTGAAGAGTGGTTTCTTCCATGCAGATCCCCATCCTGGAAATATTCTGATCTG
CAAAGGTTCAGAGGCAAGTGGGCAATATAAACTTGTTTTGACCTCCCCAGACAAGTTGAG
GATTGGATATGCTAATTTGATTCTGGCTATTGCTGATAATGACCCAGTAAAGGCATCAGA
AAGCTACAGGGAGCTTGGCATAGAGACCTTAAGCAATTGTAAGGATGAACAAAATGAATT
ATTCAAGTTGGCCCAGACAATGTTTGATACAAAACTACCACCTGGAGTAGTGATGCTACA
ACCTTTTGCAGAAGATTCTTCAATAAAAAAAGTTGGTGTTCAGGCTTTTCCAGAGGAACT
GTTTTCTATCCTTCGTACGGTTCATCTATTGAGAGGACTTAGTGTTGGCCTTGGAATAAA
CTACTCATGTGCAGACCAGTGGAGACCCATTGCAGAAGAAGCCTTGGTTCGTGCAGGTAG
ATTAAAAGATAAGGATGTCAAGAGCAGAGCACGTCAAAGCAGCTTCTTCAGAAGAATATT
TTCGCAACAGTGATTGGCTCAGTACAAAGGGGTTGGAGAAAGAGGCCACTGTAGACAAAG
CTACAGTACTCAGGGAGTGTAGATTCAGCAAATCCACATCCCATCTCATTAACTTAACAA
AAGAAAAGAGAGACAAGAGAAAGAAAAAAAAAAAAAAAAATAGTACACAGCAGTTTTCTG
GTTTGTAATTCCTTTGAACACCAGTTGTTGACTGGACAATTCTTTTCCTCTGAAATCATA
TGATGATGGAAATAAGGATTCAGCAATCCAGGCAGTTTAACTGCTTGTTCACACTTCAAC
TCATCTGTTTGAAGTGTGAACTCAGTTTATGGCTGCCTACCATGGAAATCTTTTGACTG