Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g10180.t01
CDS Infomation

cds chromosome:12X:17:12376344:12378242:-1 gene:VIT_17s0000g10180 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCTCAAATCAACCTTCACTCCCATTCTCTCGATTATCACCCCCAAACCCACAACCTCA
AAACCCTCTAAAATCTTCACCAAAGCCTTCTCACAATCCCCACCAACTGTTCGAAAAAAT
GATTCACACAACCCCTCCACCACAACCCCACCACATAATCTCCCTCCTGTTTCAGCTTAT
ATTCACCTCCCTTTCTGCAGAAAGCGCTGCCACTACTGTGATTTCCCAATTGTCGCTCTC
GGGTCTTCTTTTACCCCACCACCTGAGGACGATCCCAGAATCTTGAACTACACCCAACTC
ATTTGTCGAGAAATTGAAGCGACAAAACCAGAATGCTATCCCACCCCACCTCTTGAAACA
GTGTTTTTTGGAGGCGGCACGCCATCCCTTGTGCCGCCGAGGCTGGTTTCTGATATAGTT
GAAGCGTTGAGGTTGAAGTTTGGGTTGTGCTTGGATGCTGAAATGTCCATGGAAATGGAC
CCTGGGACTTTTGATGCAGAGAAACTGAAGGGATTGATGGAGTTGGGTGTGAATAGGGTG
TCTTTGGGAGTTCAGGCATTTCAGGAAGAGATGTTGAGGGGATGTGGGAGAGCACATGGT
GTGAAGGAGATTTATGAGGCAATTGAGACCGTCAAGTCATGTGGGGTTGAGAACTGGAGT
GTGGATCTCATCTCTTCTCTCCCTCACCAAACACCAGAAATGTGGGAGGAGAGTTTGCAG
CTTGTCATTGAAGCGCAGCCTACCCATGTGTCGGTTTATGATTTGCAAGTTGAACAAGGC
ACCAAATTTGGAATACTGTACACACCAGGGGAGTTCCCTCTGCCCTCTGAAATCCAATCA
GCAGACTTCTATAGAATGGCTTCCACCACCCTTTCTAATGCGGGCTATAATCATTATGAA
ATCAGCAGTTACTGCAAGGGTGGGTTTGAGTGCAAGCACAATCTTACCTATTGGGAGAAC
AAACCTTTCTATGGTTTTGGCCTTGGGTCTGCCAGTTATGTTGGTGGAGTGAGGTTTTCA
AGGCCGAGAAAGATGAAAGAGTATATGGGTTATGTGCAGAGCTTGGAAACCGAGGTGGTG
GGTTGTGGGGGTAATTCTGTTGATGCCAAGGATGTGGCAATGGATGTTGTGATGCTCTCT
CTTAGAACTGCCAGAGGCTTGGATTTGAAGTCCTTCAGAAATTCATTTGGTAGCTCTTTT
GTTGCCTCTCTTTGCATGGCCTATAGACCCTATGTGAAAAGTGGGCATGTGGTTTGTTTG
GATGAGCAGAGGAGACCTGTAACTTCAGATGAATTCAGCTCCTTGCTATCCAAAGATGAT
GGGATTGAAGAACGGCTGGCATTTGTTCGGCTTAGTGATCCTGATGGTTTCCTCCTATCA
AATGAATTGATATCACTAGCATTTCAGGCCATAGCTCCTTAA

Peptide Sequence

PEP ID

VIT_17s0000g10180.t01
PEP Infomation

pep chromosome:12X:17:12376344:12378242:-1 gene:VIT_17s0000g10180 transcript:VIT_17s0000g10180.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MLKSTFTPILSIITPKPTTSKPSKIFTKAFSQSPPTVRKNDSHNPSTTTPPHNLPPVSAY
IHLPFCRKRCHYCDFPIVALGSSFTPPPEDDPRILNYTQLICREIEATKPECYPTPPLET
VFFGGGTPSLVPPRLVSDIVEALRLKFGLCLDAEMSMEMDPGTFDAEKLKGLMELGVNRV
SLGVQAFQEEMLRGCGRAHGVKEIYEAIETVKSCGVENWSVDLISSLPHQTPEMWEESLQ
LVIEAQPTHVSVYDLQVEQGTKFGILYTPGEFPLPSEIQSADFYRMASTTLSNAGYNHYE
ISSYCKGGFECKHNLTYWENKPFYGFGLGSASYVGGVRFSRPRKMKEYMGYVQSLETEVV
GCGGNSVDAKDVAMDVVMLSLRTARGLDLKSFRNSFGSSFVASLCMAYRPYVKSGHVVCL
DEQRRPVTSDEFSSLLSKDDGIEERLAFVRLSDPDGFLLSNELISLAFQAIAP

Transcript Sequence

Transcript ID

VIT_17s0000g10180.t01
Transcript Infomation

cdna chromosome:12X:17:12376344:12378242:-1 gene:VIT_17s0000g10180 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CATGCTCAAATCAACCTTCACTCCCATTCTCTCGATTATCACCCCCAAACCCACAACCTC
AAAACCCTCTAAAATCTTCACCAAAGCCTTCTCACAATCCCCACCAACTGTTCGAAAAAA
TGATTCACACAACCCCTCCACCACAACCCCACCACATAATCTCCCTCCTGTTTCAGCTTA
TATTCACCTCCCTTTCTGCAGAAAGCGCTGCCACTACTGTGATTTCCCAATTGTCGCTCT
CGGGTCTTCTTTTACCCCACCACCTGAGGACGATCCCAGAATCTTGAACTACACCCAACT
CATTTGTCGAGAAATTGAAGCGACAAAACCAGAATGCTATCCCACCCCACCTCTTGAAAC
AGTGTTTTTTGGAGGCGGCACGCCATCCCTTGTGCCGCCGAGGCTGGTTTCTGATATAGT
TGAAGCGTTGAGGTTGAAGTTTGGGTTGTGCTTGGATGCTGAAATGTCCATGGAAATGGA
CCCTGGGACTTTTGATGCAGAGAAACTGAAGGGATTGATGGAGTTGGGTGTGAATAGGGT
GTCTTTGGGAGTTCAGGCATTTCAGGAAGAGATGTTGAGGGGATGTGGGAGAGCACATGG
TGTGAAGGAGATTTATGAGGCAATTGAGACCGTCAAGTCATGTGGGGTTGAGAACTGGAG
TGTGGATCTCATCTCTTCTCTCCCTCACCAAACACCAGAAATGTGGGAGGAGAGTTTGCA
GCTTGTCATTGAAGCGCAGCCTACCCATGTGTCGGTTTATGATTTGCAAGTTGAACAAGG
CACCAAATTTGGAATACTGTACACACCAGGGGAGTTCCCTCTGCCCTCTGAAATCCAATC
AGCAGACTTCTATAGAATGGCTTCCACCACCCTTTCTAATGCGGGCTATAATCATTATGA
AATCAGCAGTTACTGCAAGGGTGGGTTTGAGTGCAAGCACAATCTTACCTATTGGGAGAA
CAAACCTTTCTATGGTTTTGGCCTTGGGTCTGCCAGTTATGTTGGTGGAGTGAGGTTTTC
AAGGCCGAGAAAGATGAAAGAGTATATGGGTTATGTGCAGAGCTTGGAAACCGAGGTGGT
GGGTTGTGGGGGTAATTCTGTTGATGCCAAGGATGTGGCAATGGATGTTGTGATGCTCTC
TCTTAGAACTGCCAGAGGCTTGGATTTGAAGTCCTTCAGAAATTCATTTGGTAGCTCTTT
TGTTGCCTCTCTTTGCATGGCCTATAGACCCTATGTGAAAAGTGGGCATGTGGTTTGTTT
GGATGAGCAGAGGAGACCTGTAACTTCAGATGAATTCAGCTCCTTGCTATCCAAAGATGA
TGGGATTGAAGAACGGCTGGCATTTGTTCGGCTTAGTGATCCTGATGGTTTCCTCCTATC
AAATGAATTGATATCACTAGCATTTCAGGCCATAGCTCCTTAAAAAACTGCGAATCTTTC
TTGAAGCATTTGATCGTCATACGATGACAAAGGATGCTCCTATTACAACCATACTTTACT
CAAGGATGTTAACCAGTTGTTGGACCAACCTGCCTTAAGCAGTAGACGGATAGCTGAGAT
CGATATGGCCCGTTGAGGTGAGTGGACTGAAATGAAGAATGAAATTTGAGGACTAACTAG
GTAAGCTTATTTCACCAGTTGGTATTCTGTGCTAAATAAACAAGAAATTTCAGTGAGGCA
ATAGGCAAACTGTTCTGTTTTCTGAGCACTTATGGCGGAGAATGAAGAGGATGAACTGGC
CTCAAAAGCAAAGCAGATGACGAATCTGGAGATTGTACTTCCAAGCTAAGGTCAAGCGTC
AGATGAGATTTTTG