Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g10100.t01
CDS Infomation

cds chromosome:12X:17:12269629:12273519:1 gene:VIT_17s0000g10100 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAAAGTGGGTTTTGTTCACCAAGAACTGAAGCATTCCCAGCTGGTCTTCGTGTACTT
GTTGTTGACGATGACCCAACGTGGCTCAAAATCCTTGAAAAAATGCTCAAGAAGTGTTCT
TATGAAGTGACAACTTGCTGTTTAGCAAGAGATGCTCTGAACATGCTTCGGGAGAGAAAA
GATGGTTTTGACATCGTGATTAGTGATGTTAACATGCCAGACATGGATGGCTTCAAACTC
CTGGAACATGTCGGTCTAGAGATGGATCTCCCTGTAATTATGATGTCTGTCGATGGGGAA
ACAAGTAGAGTGATGAAAGGCGTTCAGCATGGAGCTTGCGATTATCTTCTCAAGCCTGTT
CGGATGAAAGAGCTTAAGAATATATGGCAACATGTCTTTAGGAAGAAAATACATGAGGGA
AAAGACGTTGAAAGCTATGAATGTATGCGTGAAATTCAGATGATAATGAGTAGATCAGAT
GAGTTTGATGATGGGCACCAATTAAATGGAGGTGAGCTGGGTGCAACTAGAAAACGAAAA
GATATGGAAAACAGGAGGCATGATGATCAAGAGTTGGTTGATCCATCATCATCAAAGAAG
GCTAGAGTGGTTTGGTCCATAGATCTACATCAGAAGTTTGTGGATGCTGTAAACCAGATT
GGCTTTGATAAAGTTGGTCCCAAGAAAATTCTGGACTTGATGAATGTTCCTTGGCTGACA
AGAGAAAACGTTGCCAGCCATCTGCAGAAGTACCGGCTCTACCTAAGTAGGTTGCAGAAG
GAGAATGAACTAAAAACTTCTGAAGGGATGAAGCAGCAAGATTTCACTTGTCCTGCTGGA
AGTTTAGGCTTTCAAACCTCTACTCTGATTCACCCAAAAGATGCAGCTAACTGCGATCTC
AAATACACAGGCAACAATATGCTTCTCATAGACATGGGCACAAGAATCTGTCGTGAAGCT
GATAAGAAAGGTACAGTTTCGATTTTGCCCATGGATCTCAAAGAAACTTCAACAAGTAAT
TTCCTTGACAGTCAGAGGGCAAATGTTAGTTCTCAAACCATTCTTTCCCGTCCTTTCAAC
TACCAATCAAGTCAGTCAAATACGACCAGCCAGAAGTGGAATGAAGCCCCAATGGAGCAA
TTCAAACAGCCGCCAAAACAAGAGCCTGAGCCGTATGCTCTACTAGAAGATGACTTTAGC
CATGCACTGCAGTCTGCTCCACAGCATCTTGTCCAAGTTGATCTCCAATGTTCTGCTTAT
TCTGTTGGTCCAGGAACTGCAGTCCCAGAAAGAGATAAGCCCGGCTCTGTAATGATCACG
CCTGTGCGCTCTCAATCCAGAAGCAACCATAGCCAGATTGTAAATCCAGAGACCTCAGAT
GCCATCTCCAACTTCAAAGTTGGCATGAAGAATCAGATGGTTGGTCTGAATTGCTTGAAC
GACTGTGAACCCATCCAACAAAAGATATTTACAGTAGGTGATTCCTCCTTGGGTTCTCAA
GTCGGATGTGCTTATACCGAGAGTATTGGGCTCCAGGACATAGACCTTTTGGACTACTAC
AATTCAGAACTTATTGATGAACTGGAGACAAGCTACTATGCTGACTTGGGGTTAAACTGG
GACAATGATTGTGATTCAGTTCAAAATCCTTTTGTAGATCAAAGTTTATTCACGGCACGA
GCCGAGGCTTCAGGGGTTTGCTACCCTGGTTAG

Peptide Sequence

PEP ID

VIT_17s0000g10100.t01
PEP Infomation

pep chromosome:12X:17:12269629:12273519:1 gene:VIT_17s0000g10100 transcript:VIT_17s0000g10100.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MESGFCSPRTEAFPAGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCCLARDALNMLRERK
DGFDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPV
RMKELKNIWQHVFRKKIHEGKDVESYECMREIQMIMSRSDEFDDGHQLNGGELGATRKRK
DMENRRHDDQELVDPSSSKKARVVWSIDLHQKFVDAVNQIGFDKVGPKKILDLMNVPWLT
RENVASHLQKYRLYLSRLQKENELKTSEGMKQQDFTCPAGSLGFQTSTLIHPKDAANCDL
KYTGNNMLLIDMGTRICREADKKGTVSILPMDLKETSTSNFLDSQRANVSSQTILSRPFN
YQSSQSNTTSQKWNEAPMEQFKQPPKQEPEPYALLEDDFSHALQSAPQHLVQVDLQCSAY
SVGPGTAVPERDKPGSVMITPVRSQSRSNHSQIVNPETSDAISNFKVGMKNQMVGLNCLN
DCEPIQQKIFTVGDSSLGSQVGCAYTESIGLQDIDLLDYYNSELIDELETSYYADLGLNW
DNDCDSVQNPFVDQSLFTARAEASGVCYPG

Transcript Sequence

Transcript ID

VIT_17s0000g10100.t01
Transcript Infomation

cdna chromosome:12X:17:12269629:12273519:1 gene:VIT_17s0000g10100 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAAAGTGGGTTTTGTTCACCAAGAACTGAAGCATTCCCAGCTGGTCTTCGTGTACTT
GTTGTTGACGATGACCCAACGTGGCTCAAAATCCTTGAAAAAATGCTCAAGAAGTGTTCT
TATGAAGTGACAACTTGCTGTTTAGCAAGAGATGCTCTGAACATGCTTCGGGAGAGAAAA
GATGGTTTTGACATCGTGATTAGTGATGTTAACATGCCAGACATGGATGGCTTCAAACTC
CTGGAACATGTCGGTCTAGAGATGGATCTCCCTGTAATTATGATGTCTGTCGATGGGGAA
ACAAGTAGAGTGATGAAAGGCGTTCAGCATGGAGCTTGCGATTATCTTCTCAAGCCTGTT
CGGATGAAAGAGCTTAAGAATATATGGCAACATGTCTTTAGGAAGAAAATACATGAGGGA
AAAGACGTTGAAAGCTATGAATGTATGCGTGAAATTCAGATGATAATGAGTAGATCAGAT
GAGTTTGATGATGGGCACCAATTAAATGGAGGTGAGCTGGGTGCAACTAGAAAACGAAAA
GATATGGAAAACAGGAGGCATGATGATCAAGAGTTGGTTGATCCATCATCATCAAAGAAG
GCTAGAGTGGTTTGGTCCATAGATCTACATCAGAAGTTTGTGGATGCTGTAAACCAGATT
GGCTTTGATAAAGTTGGTCCCAAGAAAATTCTGGACTTGATGAATGTTCCTTGGCTGACA
AGAGAAAACGTTGCCAGCCATCTGCAGAAGTACCGGCTCTACCTAAGTAGGTTGCAGAAG
GAGAATGAACTAAAAACTTCTGAAGGGATGAAGCAGCAAGATTTCACTTGTCCTGCTGGA
AGTTTAGGCTTTCAAACCTCTACTCTGATTCACCCAAAAGATGCAGCTAACTGCGATCTC
AAATACACAGGCAACAATATGCTTCTCATAGACATGGGCACAAGAATCTGTCGTGAAGCT
GATAAGAAAGGTACAGTTTCGATTTTGCCCATGGATCTCAAAGAAACTTCAACAAGTAAT
TTCCTTGACAGTCAGAGGGCAAATGTTAGTTCTCAAACCATTCTTTCCCGTCCTTTCAAC
TACCAATCAAGTCAGTCAAATACGACCAGCCAGAAGTGGAATGAAGCCCCAATGGAGCAA
TTCAAACAGCCGCCAAAACAAGAGCCTGAGCCGTATGCTCTACTAGAAGATGACTTTAGC
CATGCACTGCAGTCTGCTCCACAGCATCTTGTCCAAGTTGATCTCCAATGTTCTGCTTAT
TCTGTTGGTCCAGGAACTGCAGTCCCAGAAAGAGATAAGCCCGGCTCTGTAATGATCACG
CCTGTGCGCTCTCAATCCAGAAGCAACCATAGCCAGATTGTAAATCCAGAGACCTCAGAT
GCCATCTCCAACTTCAAAGTTGGCATGAAGAATCAGATGGTTGGTCTGAATTGCTTGAAC
GACTGTGAACCCATCCAACAAAAGATATTTACAGTAGGTGATTCCTCCTTGGGTTCTCAA
GTCGGATGTGCTTATACCGAGAGTATTGGGCTCCAGGACATAGACCTTTTGGACTACTAC
AATTCAGAACTTATTGATGAACTGGAGACAAGCTACTATGCTGACTTGGGGTTAAACTGG
GACAATGATTGTGATTCAGTTCAAAATCCTTTTGTAGATCAAAGTTTATTCACGGCACGA
GCCGAGGCTTCAGGGGTTTGCTACCCTGGTTAGGAAGTGGAAAGCTAGAGAGCATTTTCT
TTGGAGGTGTACTGAGAGTGGATTTGATTATAAATGTTGAAATATGTACCATTTTGATGT
ACGCAGGCTAAGCACACTGCTTTAACTAATCTACTGATTAACAGCACTAGTTACTGTTGA
AATATTCTCACTTTTATTTCTAAATGCATCATTGGCGTATTGCTTTATGCCTC