Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g10090.t01
CDS Infomation

cds chromosome:12X:17:12257609:12259195:-1 gene:VIT_17s0000g10090 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGAACTGGGTTTTGTACAAAACTGGGAAAAACATGGGCGAAAGCGGAGAAGGGTTTA
AACGACGCCGTTTCTAGGAGTTTCGTCGGAAAATACTTCAAGTTACAGGCCAGAAAGACT
TGCTTCACCAAGGAGCTCCGCGCCGCCACCGCCACGTTTCTCACCATGGCTTATATCCTC
ACCGTCAACGCCACCATTGTCGCCGACTCCGGCGGCACCTGCTCCCTATCCGACTGCACG
CCTCCGGGGGGGCCGGACTGCGTTGTCAAGCCGAACTCCGGCTACGAGACCTGTCTCGCG
AGGATCAGAAACGACCTCGTGGTGGTCACTGCGTTGTCCGCTATGATCGGCTCGTTTTTC
ATGGGTGTATTGGCGAATTTGCCCCTGGCTGTGGCTCCAGCCATGGGCCCAAATGCTTAC
TTCACTTACGACTTAGTGGGCTTCCATGGAACTGGGTCCATGACGTACGGAACTGGGCTC
GCCGTTCTCTGTGTCGAGGGGTTAGCGTTTATCTTCTTATCGGCCTCTGGCCTGAGGGCT
AAGGTAGCCCGGTTGATCCCCCAGTCAGTTAGGCTCGCATTTGCCGCTGGCATTGGACTG
TTCATTGCTTTTGTGGGCCTCCAGGCCCACCAGGGAGTGGGCCTTGTTGGTCCTGATCCA
TCCACATTGGTCACCGCGGCCGCCTGCGCGCATACCGACCCAGTAACCGGCGCGTGCGTC
GACGGGAAGATGCGGAGCCCTACGTTTTGGCTGGGCATGGTGGGGCTTGTGATTACGTGT
TATGGGCTAATGAAGGAAGTGAAGGGTAGTATGATATATGGAATACTGTTTGTGACCCTG
ATTTCATGGATTAGAGGCACTGCAGTTACATATTTTCCTTACACCAAGGTTGGTGACACC
AAATTCAACTACTTCAAGAAAGTGGTGGATTTCCACAGAATAGAATCCACGGCTGGGGCC
ATAAGCTTTACTAATTTTAACAGAAGTGAGGTCTGGGTGGCCCTAATGACGTTATTGTAT
GTGGATGTGCTCGCCACCACAGGGATACTGTACACAATGGCTGAGCTTGGGGGCTTTGTG
GATGACAAGGGAAGCTTTGAGGGTGAATACATGGCGTACTTGGTTGATGCAGGGACGACA
GTTGTGGCATCCACGCTCGGGGGATCTCCGGTTGCAACGTATGTGGAGTCATCGGCGGGG
CTGAGGGAAGGCGGGCGGACAGGGCTGACAGCGGTGATTGTATCGTTTTATTTCATGCTG
TCGTTGTTTTTTACTCCATTGTTAACCAGTGTACCTCCATGGGCAATAGGGCCATCACTG
GTGATGGTTGGGGTGCTGATGATGAAGGTGGTGAAGGACATAGAGTGGGGTAACGTGAAG
GATGCAGTGCCGGCTTTTGCCACCATGGTTCTCATGCCACTGACTTATTCCATAGCAAAT
GGGATCATAGGTGGAGCTGGAATCTACATTGTGCTGAGCTTGTATGATTATGTTGTGTGG
GTGGTGAGGAGGGCGGCCAAGATGAGAAGAGAGAAAAATCAAGTGTCTGCTGCAGGTGGT
GGAGGTCAAGATGTGGAAATGACTTAA

Peptide Sequence

PEP ID

VIT_17s0000g10090.t01
PEP Infomation

pep chromosome:12X:17:12257609:12259195:-1 gene:VIT_17s0000g10090 transcript:VIT_17s0000g10090.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGTGFCTKLGKTWAKAEKGLNDAVSRSFVGKYFKLQARKTCFTKELRAATATFLTMAYIL
TVNATIVADSGGTCSLSDCTPPGGPDCVVKPNSGYETCLARIRNDLVVVTALSAMIGSFF
MGVLANLPLAVAPAMGPNAYFTYDLVGFHGTGSMTYGTGLAVLCVEGLAFIFLSASGLRA
KVARLIPQSVRLAFAAGIGLFIAFVGLQAHQGVGLVGPDPSTLVTAAACAHTDPVTGACV
DGKMRSPTFWLGMVGLVITCYGLMKEVKGSMIYGILFVTLISWIRGTAVTYFPYTKVGDT
KFNYFKKVVDFHRIESTAGAISFTNFNRSEVWVALMTLLYVDVLATTGILYTMAELGGFV
DDKGSFEGEYMAYLVDAGTTVVASTLGGSPVATYVESSAGLREGGRTGLTAVIVSFYFML
SLFFTPLLTSVPPWAIGPSLVMVGVLMMKVVKDIEWGNVKDAVPAFATMVLMPLTYSIAN
GIIGGAGIYIVLSLYDYVVWVVRRAAKMRREKNQVSAAGGGGQDVEMT

Transcript Sequence

Transcript ID

VIT_17s0000g10090.t01
Transcript Infomation

cdna chromosome:12X:17:12257609:12259195:-1 gene:VIT_17s0000g10090 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGAACTGGGTTTTGTACAAAACTGGGAAAAACATGGGCGAAAGCGGAGAAGGGTTTA
AACGACGCCGTTTCTAGGAGTTTCGTCGGAAAATACTTCAAGTTACAGGCCAGAAAGACT
TGCTTCACCAAGGAGCTCCGCGCCGCCACCGCCACGTTTCTCACCATGGCTTATATCCTC
ACCGTCAACGCCACCATTGTCGCCGACTCCGGCGGCACCTGCTCCCTATCCGACTGCACG
CCTCCGGGGGGGCCGGACTGCGTTGTCAAGCCGAACTCCGGCTACGAGACCTGTCTCGCG
AGGATCAGAAACGACCTCGTGGTGGTCACTGCGTTGTCCGCTATGATCGGCTCGTTTTTC
ATGGGTGTATTGGCGAATTTGCCCCTGGCTGTGGCTCCAGCCATGGGCCCAAATGCTTAC
TTCACTTACGACTTAGTGGGCTTCCATGGAACTGGGTCCATGACGTACGGAACTGGGCTC
GCCGTTCTCTGTGTCGAGGGGTTAGCGTTTATCTTCTTATCGGCCTCTGGCCTGAGGGCT
AAGGTAGCCCGGTTGATCCCCCAGTCAGTTAGGCTCGCATTTGCCGCTGGCATTGGACTG
TTCATTGCTTTTGTGGGCCTCCAGGCCCACCAGGGAGTGGGCCTTGTTGGTCCTGATCCA
TCCACATTGGTCACCGCGGCCGCCTGCGCGCATACCGACCCAGTAACCGGCGCGTGCGTC
GACGGGAAGATGCGGAGCCCTACGTTTTGGCTGGGCATGGTGGGGCTTGTGATTACGTGT
TATGGGCTAATGAAGGAAGTGAAGGGTAGTATGATATATGGAATACTGTTTGTGACCCTG
ATTTCATGGATTAGAGGCACTGCAGTTACATATTTTCCTTACACCAAGGTTGGTGACACC
AAATTCAACTACTTCAAGAAAGTGGTGGATTTCCACAGAATAGAATCCACGGCTGGGGCC
ATAAGCTTTACTAATTTTAACAGAAGTGAGGTCTGGGTGGCCCTAATGACGTTATTGTAT
GTGGATGTGCTCGCCACCACAGGGATACTGTACACAATGGCTGAGCTTGGGGGCTTTGTG
GATGACAAGGGAAGCTTTGAGGGTGAATACATGGCGTACTTGGTTGATGCAGGGACGACA
GTTGTGGCATCCACGCTCGGGGGATCTCCGGTTGCAACGTATGTGGAGTCATCGGCGGGG
CTGAGGGAAGGCGGGCGGACAGGGCTGACAGCGGTGATTGTATCGTTTTATTTCATGCTG
TCGTTGTTTTTTACTCCATTGTTAACCAGTGTACCTCCATGGGCAATAGGGCCATCACTG
GTGATGGTTGGGGTGCTGATGATGAAGGTGGTGAAGGACATAGAGTGGGGTAACGTGAAG
GATGCAGTGCCGGCTTTTGCCACCATGGTTCTCATGCCACTGACTTATTCCATAGCAAAT
GGGATCATAGGTGGAGCTGGAATCTACATTGTGCTGAGCTTGTATGATTATGTTGTGTGG
GTGGTGAGGAGGGCGGCCAAGATGAGAAGAGAGAAAAATCAAGTGTCTGCTGCAGGTGGT
GGAGGTCAAGATGTGGAAATGACTTAA