Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g09990.t01
CDS Infomation

cds chromosome:12X:17:11993982:12000962:1 gene:VIT_17s0000g09990 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGACGGCTCTGAAAACACCGTTTCAATTCCCAATGAAGATGAGTTAGGGTTAGGGCTC
CGGCCTTCGTCTCCTGCCCAGCCTGATGTTGAGAAGCTCAACCAGGAATTCCTGTCTCTA
GTGTTGGAGCAACACGAGCCTGTTGTTGAATCTCTCGCTTTGGAGCAACATGAGCCTGTT
GTTGAATCTCTCGCTTTGGAGCAACATGAGCCTGTTGTTGAATCTCTCGCTTTGGAGGAG
AGGGAGGAGGAGAAGGAGGAGGATGAGGAGAGTGATTCCAACGGTGAGGTGAAAGCAAGT
GATGATGAGGAGGAGCAGTGCGAGAATCTTGAGGACGAATCGGCGGCCAAGGATGACAAG
AGTGCCAGGTTTCAGTATCCGGTGAGGCCGGATGCGGTGGACTGTTCCTTTTATCTTCGG
ACTGGGACGTGTAAGTTTGGATCCAATTGCAAGTTCAATCACCCGATTAGAAGGAAGAAC
CAGGTTGCTAAGGAGAAGGTGAAGGAAAAGGAAAAGGAAGAATTTCCAGAAAGGCCAGGG
CAAACAGAATGCAAGTATTACCTGAGGACAGGGGGATGTAAGTTTGGAAAAGCTTGTAGA
TATAATCACACGAAGGCTAAACCTTCTGCAGTTCCAGTTCTAGAGCTCAACTTTCTTGGC
CTGCCAATCCGAATGGGAGAGAAAGAGTGTCCCTACTACATGCGGACTGGCTCATGCAAG
TATGGAGCAAACTGCAGGTTTAATCATCCTGATCCTACAGCTGCAGGGGGATATGAATCT
CCTTCAGGATATGGAAATGGGGGATCTGTTCCATTACAAGGTGCATCACAATCAAATATG
GCATCTTGGTCTTCACCAAGAGCATTGAATGAGCCTGCTCCATTTGTGCCTATTATGTTT
TCACCAACTCAAGGTGTTCCTCCCCCAAATCCTGAATGGAATGGATATCAGGCTCCTCTG
TATCCACCACCACCACCAGAAAGGAGTATGCATCCCCCTCCAGCATTTGTTATAAACAAT
ACAGCAACGGATGCCAATGTATATGGTCATCATCAACAGCAACAGCAATCGCTTATTGAA
GACTTTCCAGAACGGCCTGGTCAACCTGAATGCTCTTACTTCTTAAAGACTGGGGACTGC
AAATTTAGGGCTGCATGCAAATATCACCATCCAAAGAATCGAATTCCAAAGTCACCTCCA
TGCACCCTCAGCGACAAGGGTCTGCCATTAAGACCAGATCAGAATATCTGCACCCACTAC
AACCGCTATGGCATTTGCAAGTTCGGACCTGCCTGTAAATTTGACCATCCAGTAAATTAT
GGCAACTCGGCCTCGGCCCCTTCAGCTGAGTCTGGCCAAGACCAGCCCCCTCCTTTTGGG
GGCTCTGTCACTGCTGATGGGGTCAGACCTGGCAGTGGGAACGGAAACGAGATTCTAATC
CAGCAGCCTGTCTAA

Peptide Sequence

PEP ID

VIT_17s0000g09990.t01
PEP Infomation

pep chromosome:12X:17:11993982:12000962:1 gene:VIT_17s0000g09990 transcript:VIT_17s0000g09990.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDGSENTVSIPNEDELGLGLRPSSPAQPDVEKLNQEFLSLVLEQHEPVVESLALEQHEPV
VESLALEQHEPVVESLALEEREEEKEEDEESDSNGEVKASDDEEEQCENLEDESAAKDDK
SARFQYPVRPDAVDCSFYLRTGTCKFGSNCKFNHPIRRKNQVAKEKVKEKEKEEFPERPG
QTECKYYLRTGGCKFGKACRYNHTKAKPSAVPVLELNFLGLPIRMGEKECPYYMRTGSCK
YGANCRFNHPDPTAAGGYESPSGYGNGGSVPLQGASQSNMASWSSPRALNEPAPFVPIMF
SPTQGVPPPNPEWNGYQAPLYPPPPPERSMHPPPAFVINNTATDANVYGHHQQQQQSLIE
DFPERPGQPECSYFLKTGDCKFRAACKYHHPKNRIPKSPPCTLSDKGLPLRPDQNICTHY
NRYGICKFGPACKFDHPVNYGNSASAPSAESGQDQPPPFGGSVTADGVRPGSGNGNEILI
QQPV

Transcript Sequence

Transcript ID

VIT_17s0000g09990.t01
Transcript Infomation

cdna chromosome:12X:17:11993982:12000962:1 gene:VIT_17s0000g09990 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CAAAAAAAAGGGGGCTTTCTCTCTCTCTCTCTCTCTTCCTCCATAATTAGGGTTTTGAAA
TGTGGAGGGAGAATGGACGGCTCTGAAAACACCGTTTCAATTCCCAATGAAGATGAGTTA
GGGTTAGGGCTCCGGCCTTCGTCTCCTGCCCAGCCTGATGTTGAGAAGCTCAACCAGGAA
TTCCTGTCTCTAGTGTTGGAGCAACACGAGCCTGTTGTTGAATCTCTCGCTTTGGAGCAA
CATGAGCCTGTTGTTGAATCTCTCGCTTTGGAGCAACATGAGCCTGTTGTTGAATCTCTC
GCTTTGGAGGAGAGGGAGGAGGAGAAGGAGGAGGATGAGGAGAGTGATTCCAACGGTGAG
GTGAAAGCAAGTGATGATGAGGAGGAGCAGTGCGAGAATCTTGAGGACGAATCGGCGGCC
AAGGATGACAAGAGTGCCAGGTTTCAGTATCCGGTGAGGCCGGATGCGGTGGACTGTTCC
TTTTATCTTCGGACTGGGACGTGTAAGTTTGGATCCAATTGCAAGTTCAATCACCCGATT
AGAAGGAAGAACCAGGTTGCTAAGGAGAAGGTGAAGGAAAAGGAAAAGGAAGAATTTCCA
GAAAGGCCAGGGCAAACAGAATGCAAGTATTACCTGAGGACAGGGGGATGTAAGTTTGGA
AAAGCTTGTAGATATAATCACACGAAGGCTAAACCTTCTGCAGTTCCAGTTCTAGAGCTC
AACTTTCTTGGCCTGCCAATCCGAATGGGAGAGAAAGAGTGTCCCTACTACATGCGGACT
GGCTCATGCAAGTATGGAGCAAACTGCAGGTTTAATCATCCTGATCCTACAGCTGCAGGG
GGATATGAATCTCCTTCAGGATATGGAAATGGGGGATCTGTTCCATTACAAGGTGCATCA
CAATCAAATATGGCATCTTGGTCTTCACCAAGAGCATTGAATGAGCCTGCTCCATTTGTG
CCTATTATGTTTTCACCAACTCAAGGTGTTCCTCCCCCAAATCCTGAATGGAATGGATAT
CAGGCTCCTCTGTATCCACCACCACCACCAGAAAGGAGTATGCATCCCCCTCCAGCATTT
GTTATAAACAATACAGCAACGGATGCCAATGTATATGGTCATCATCAACAGCAACAGCAA
TCGCTTATTGAAGACTTTCCAGAACGGCCTGGTCAACCTGAATGCTCTTACTTCTTAAAG
ACTGGGGACTGCAAATTTAGGGCTGCATGCAAATATCACCATCCAAAGAATCGAATTCCA
AAGTCACCTCCATGCACCCTCAGCGACAAGGGTCTGCCATTAAGACCAGATCAGAATATC
TGCACCCACTACAACCGCTATGGCATTTGCAAGTTCGGACCTGCCTGTAAATTTGACCAT
CCAGTAAATTATGGCAACTCGGCCTCGGCCCCTTCAGCTGAGTCTGGCCAAGACCAGCCC
CCTCCTTTTGGGGGCTCTGTCACTGCTGATGGGGTCAGACCTGGCAGTGGGAACGGAAAC
GAGATTCTAATCCAGCAGCCTGTCTAAGACTTTTTGCATTAAGGTGCTTCTTAATGTTTT
AAAGGATTTAGTTAACAAGGATTTTGGGTTTTTTTTTTTTTTTCGTTTTTGTTTTTTTCT
CCTCTTGTAAACTTAAAAAAAAAAATTTCTATTTATCTCTTCAGTTGAAGCTGCCACATG
CTTTTCAAAGGATGGCAATTTTATAATGTGTTATGTTACTACAAAGCTTAAGCAAAATCA
GGATGTGTAAATTATTCTATATTATTCTCGTATCATCATCATAGCTTTCCTTGT