Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g09900.t01
CDS Infomation

cds chromosome:12X:17:11854516:11855478:1 gene:VIT_17s0000g09900 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCAAAACGTACATGCAGGCATGAAAAATCCCATTCTCAAACTACCCCTCCTCCTCCTC
AAACCCTTCTTCCTCTCTCTCTTCCTCTCCCTCGCTGTCCTCTTTTTCCTCGCTCTCCAA
ACGCCCCGTCACCGGAACCCTAAACTCTCCCCCGGCCTCCGGATACGCCCCGGTTACTCC
TCCTACGATTCCTACATTCAGCACCAGCTCAACAAGACCCTCAACCCCAAACTCCGAAAA
ATATGGACCACCCGAGACTGGGACCGAAAAGTCCTCGTTTTCTCTCAGTTTTTCCGGGGT
TTGAAGGAGAGAAAGCTTCTGTTTAACGACTCGAAGGCGCTTTGCATCGGAGCCCGGGTC
GGACAGGAGGTGGAGGCGTTGAGGCGAGTCGGAGTGGGTGACTCGGTGGGGATGGATCTG
GTGCCGTACCCTCCACTGGTGTTGAAGGGCGACTTTCATTCCCAGCCGTTCGATGACGAG
ACTTTTGATTTTGAATTCTCGAATGTATTTGACCATGCGTTGCATCCGTGGAAGTTCGTT
AGGGAGATCGAACGGACGTTGAGAGCCGGTGGGATCTGTGTGTTACACGTGGCGCTGTCT
AGACGAGCTGATAAGTACTCGGCCAATGACTTGTACAGCGTGGCGCCGTTAGTGGAGTTG
TTTCGGAAATCGGATTTGGTTGGGGTCCGAAACGTTGATGGTTTCGGGTTGGACACTGAG
GTGGTTTTCAGGAAGAAAGAGAAGGAGAAGAAGAATTAA

Peptide Sequence

PEP ID

VIT_17s0000g09900.t01
PEP Infomation

pep chromosome:12X:17:11854516:11855478:1 gene:VIT_17s0000g09900 transcript:VIT_17s0000g09900.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MQNVHAGMKNPILKLPLLLLKPFFLSLFLSLAVLFFLALQTPRHRNPKLSPGLRIRPGYS
SYDSYIQHQLNKTLNPKLRKIWTTRDWDRKVLVFSQFFRGLKERKLLFNDSKALCIGARV
GQEVEALRRVGVGDSVGMDLVPYPPLVLKGDFHSQPFDDETFDFEFSNVFDHALHPWKFV
REIERTLRAGGICVLHVALSRRADKYSANDLYSVAPLVELFRKSDLVGVRNVDGFGLDTE
VVFRKKEKEKKN

Transcript Sequence

Transcript ID

VIT_17s0000g09900.t01
Transcript Infomation

cdna chromosome:12X:17:11854516:11855478:1 gene:VIT_17s0000g09900 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTGTCTCTGGCGTCCAAACTACAAACACGGCCTTACAATGGAACCATATTTTACAAGAGC
CCCCCGAACATATCGTCTCTCTCACATTCATGCAAAACGTACATGCAGGCATGAAAAATC
CCATTCTCAAACTACCCCTCCTCCTCCTCAAACCCTTCTTCCTCTCTCTCTTCCTCTCCC
TCGCTGTCCTCTTTTTCCTCGCTCTCCAAACGCCCCGTCACCGGAACCCTAAACTCTCCC
CCGGCCTCCGGATACGCCCCGGTTACTCCTCCTACGATTCCTACATTCAGCACCAGCTCA
ACAAGACCCTCAACCCCAAACTCCGAAAAATATGGACCACCCGAGACTGGGACCGAAAAG
TCCTCGTTTTCTCTCAGTTTTTCCGGGGTTTGAAGGAGAGAAAGCTTCTGTTTAACGACT
CGAAGGCGCTTTGCATCGGAGCCCGGGTCGGACAGGAGGTGGAGGCGTTGAGGCGAGTCG
GAGTGGGTGACTCGGTGGGGATGGATCTGGTGCCGTACCCTCCACTGGTGTTGAAGGGCG
ACTTTCATTCCCAGCCGTTCGATGACGAGACTTTTGATTTTGAATTCTCGAATGTATTTG
ACCATGCGTTGCATCCGTGGAAGTTCGTTAGGGAGATCGAACGGACGTTGAGAGCCGGTG
GGATCTGTGTGTTACACGTGGCGCTGTCTAGACGAGCTGATAAGTACTCGGCCAATGACT
TGTACAGCGTGGCGCCGTTAGTGGAGTTGTTTCGGAAATCGGATTTGGTTGGGGTCCGAA
ACGTTGATGGTTTCGGGTTGGACACTGAGGTGGTTTTCAGGAAGAAAGAGAAGGAGAAGA
AGAATTAAGGGGCCTGATATCACCCTTTGTTGTGATTATGGTGGATAGGATCACACGTGT
CTATGTAAGTGATGATTCATTTCTTTATTTATTATAATAATAGAGTGTATAAAGAAATCA
GAA