Gene sequences

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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_17s0000g09810.t01
CDS Infomation	cds chromosome:12X:17:11675130:11676755:-1 gene:VIT_17s0000g09810 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectate lyase [Source:UniProtKB/TrEMBL;Acc:D7SHE0]
Sequence	ATGGCTAGCTCTTCACTTTCCCTCTTCTTCCTCTTCTCTCTCCTGTCTCCAATTCTCATT GCCTCCTCTCCGGTTCAGGACCCTGAACTGGTGATACAAGAAGTACATAGGAGCATCAAT GAGTCAAGGAGGAACTTGGGGTATCTGTCTTGTGGGAGTGGGAACCCCATTGATGACTGC TGGAGGTGTAACGCCAATTGGGAGAAGAACCGGCAGAGCCTGGCTGATTGTGCAATTGGG TTTGGGAAGAATGCCATAGGTGGCAAGAACGGAAAGATTTACGTGGTCACAGACTCCAGT GATGATGATGTGGTGAATCCTAAGCCGGGGACTCTTCGGTATGCAGTCATCCAAGATGAG CCCTTGTGGATCATCTTTGCTCGGGACATGGTGATTAAGTTGAAGGAAGAGTTGATCATG AACTCCTTCAAGACCATTGATGGCAGGGGAGCTAGTGTTCACATTGCAGGTGGACCATGC ATTACTATACAGTTTGTGACCAACATTATCATACATGGACTCAACATCCATGACTGCAAG CAAGGAGGGAATACTAATGTTAGAGACTCCCCAAGTCACTACGGGTTTAGGACGATATCA GACGGTGATGGGGTGTCCATCTTTGGTGGGAGCCATATCTGGGTGGACCACTGCTCACTC TCAAACTGCCATGATGGACTCATTGATGCCATCCATGGCTCCACTGCCATCACTATCTCA AACAATTACATGACTCACCATGATAAAGTCATGCTTTTGGGCCACAGTGATTCCTACACT CAGGACAAGAACATGCAAGTCACTATAGCCTTCAATCACTTTGGAGAAGGGCTTGTCCAA AGAATGCCAAGATGTAGACATGGATACTTCCATGTGGTAAACAATGACTACACCCATTGG GAAATGTATGCCATTGGAGGGAGTGCTGACCCAACCATCAACAGCCAAGGCAATAGGTTT CTTGCACCCAATGATAGATTCAGCAAAGAGGTGACCAAACATGAGGATGCACCAGAAAGT CAATGGAAGAACTGGAATTGGAGGTCAGAGGGAGACTTGATGTTAAATGGTGCATATTTC ACACCATCAGGGGCAGGAGCCTCATCAAGTTATGCCAGGGCATCAAGCTTGGGGGCAAGA CCATCTTCCTTGGTGGCTTCCATCACTGGGTCAGCAGGTGCACTTAGCTGCAAGAAAGGT TCTCGATGCTGA

Peptide Sequence

PEP ID	VIT_17s0000g09810.t01
PEP Infomation	pep chromosome:12X:17:11675130:11676755:-1 gene:VIT_17s0000g09810 transcript:VIT_17s0000g09810.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectate lyase [Source:UniProtKB/TrEMBL;Acc:D7SHE0]
Sequence	MASSSLSLFFLFSLLSPILIASSPVQDPELVIQEVHRSINESRRNLGYLSCGSGNPIDDC WRCNANWEKNRQSLADCAIGFGKNAIGGKNGKIYVVTDSSDDDVVNPKPGTLRYAVIQDE PLWIIFARDMVIKLKEELIMNSFKTIDGRGASVHIAGGPCITIQFVTNIIIHGLNIHDCK QGGNTNVRDSPSHYGFRTISDGDGVSIFGGSHIWVDHCSLSNCHDGLIDAIHGSTAITIS NNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHW EMYAIGGSADPTINSQGNRFLAPNDRFSKEVTKHEDAPESQWKNWNWRSEGDLMLNGAYF TPSGAGASSSYARASSLGARPSSLVASITGSAGALSCKKGSRC

Transcript Sequence

Transcript ID	VIT_17s0000g09810.t01
Transcript Infomation	cdna chromosome:12X:17:11675130:11676755:-1 gene:VIT_17s0000g09810 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectate lyase [Source:UniProtKB/TrEMBL;Acc:D7SHE0]
Sequence	CTCTCTCTCTCTTTTTCTCTCCACTTTCTATAGAGAAGAGGAAAATGGCTAGCTCTTCAC TTTCCCTCTTCTTCCTCTTCTCTCTCCTGTCTCCAATTCTCATTGCCTCCTCTCCGGTTC AGGACCCTGAACTGGTGATACAAGAAGTACATAGGAGCATCAATGAGTCAAGGAGGAACT TGGGGTATCTGTCTTGTGGGAGTGGGAACCCCATTGATGACTGCTGGAGGTGTAACGCCA ATTGGGAGAAGAACCGGCAGAGCCTGGCTGATTGTGCAATTGGGTTTGGGAAGAATGCCA TAGGTGGCAAGAACGGAAAGATTTACGTGGTCACAGACTCCAGTGATGATGATGTGGTGA ATCCTAAGCCGGGGACTCTTCGGTATGCAGTCATCCAAGATGAGCCCTTGTGGATCATCT TTGCTCGGGACATGGTGATTAAGTTGAAGGAAGAGTTGATCATGAACTCCTTCAAGACCA TTGATGGCAGGGGAGCTAGTGTTCACATTGCAGGTGGACCATGCATTACTATACAGTTTG TGACCAACATTATCATACATGGACTCAACATCCATGACTGCAAGCAAGGAGGGAATACTA ATGTTAGAGACTCCCCAAGTCACTACGGGTTTAGGACGATATCAGACGGTGATGGGGTGT CCATCTTTGGTGGGAGCCATATCTGGGTGGACCACTGCTCACTCTCAAACTGCCATGATG GACTCATTGATGCCATCCATGGCTCCACTGCCATCACTATCTCAAACAATTACATGACTC ACCATGATAAAGTCATGCTTTTGGGCCACAGTGATTCCTACACTCAGGACAAGAACATGC AAGTCACTATAGCCTTCAATCACTTTGGAGAAGGGCTTGTCCAAAGAATGCCAAGATGTA GACATGGATACTTCCATGTGGTAAACAATGACTACACCCATTGGGAAATGTATGCCATTG GAGGGAGTGCTGACCCAACCATCAACAGCCAAGGCAATAGGTTTCTTGCACCCAATGATA GATTCAGCAAAGAGGTGACCAAACATGAGGATGCACCAGAAAGTCAATGGAAGAACTGGA ATTGGAGGTCAGAGGGAGACTTGATGTTAAATGGTGCATATTTCACACCATCAGGGGCAG GAGCCTCATCAAGTTATGCCAGGGCATCAAGCTTGGGGGCAAGACCATCTTCCTTGGTGG CTTCCATCACTGGGTCAGCAGGTGCACTTAGCTGCAAGAAAGGTTCTCGATGCTGATCAC TACAGT