Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g09740.t01
CDS Infomation

cds chromosome:12X:17:11600235:11607173:1 gene:VIT_17s0000g09740 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGGGGTGTGACTTCATCCATGGCTGCCAAGTTGGCTTTCTTCCCACCAAACCCTCCA
TCCTACAAGCTAATTACGGACGATGCCACCGGCCTCTTGCTCTTCAACCACTTCCCCCAC
CGCGAAAACGTCGACATTTTGAAGCTTCCGACGCGCCGCGGCACCGAGATCGTGGCCCTC
TATGTGCGGTACCCCATGGCCACCTCTACGCTGCTCTATTCCCATGGGAATGCGGCTGAT
ATCGGCCAGATGTACGAGCTCTTCATCGAGTTGAGCATTCACTTGCGGGTTAATCTCATG
GGGTATGATTATTCTGGCTATGGGCAGTCTTCAGGAAAGCCAAGTGAGCACAATACTTAT
GCAGATATTGAAGCTGCATATAAATGTCTTGAAGAAAGCTTTGGTGCGAAGCAGGAAGAC
ATCATCCTTTATGGTCAGTCTGTTGGAAGTGGGCCTACTTTGGATCTTGCAGCTCGTTTG
CCTCGATTAAGAGCTGTTGTTTTGCATAGTCCAATACTCTCAGGCTTACGAGTCATGTAT
CCTGTGAAACGTACATATTGGTTTGATATCTACAAGAATATTGACAAAATCCCATTGGTG
CAGTGCCCTGTACTAGTGATTCATGGCACAGCTGATGAAGTTGTTGACTGCTCTCATGGC
AAGCAGCTTTGGGAACTCTGCAAAGAGAAGTATGAACCCTTATGGTTAAAAGGGGGGAAT
CATTGTGATCTGGAGCTGTATCCAGAATACATTAAACATCTCAAGAAGTTCATATCCACA
GTGGAAAAATCACCTTCCCGGAGGAGCAGTGCAAGGAGAAGTGTAGACCGGCCAGAATAT
TCCAGGAAGAGTACTGATTGTTATGAGGCTCCAAGGAAGAGCACAGATCAGGCTCCAAGG
AAGAGCACGGATCAGGCTCCAAGGAAGAGCACTGATAGGAGAGACAAACCAAGGCGGAGC
ACTGACAGGCCTGAAAAACTGAAACTCTATGACTACAAGTCTAATGATGTTGACAAGCTT
GAGAAGTTAAGAACCTCTCTTGATCAGGTAGAGAGATCTCGGAGAAGCGTGGAATACAAT
GATAAGTCTCGGAGAAGCATCAACCAACAGTTGGAAAGAGCACGGAAGAGCGTGGATTGG
TTGGACAGAATACGTGCCGGATAA

Peptide Sequence

PEP ID

VIT_17s0000g09740.t01
PEP Infomation

pep chromosome:12X:17:11600235:11607173:1 gene:VIT_17s0000g09740 transcript:VIT_17s0000g09740.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGGVTSSMAAKLAFFPPNPPSYKLITDDATGLLLFNHFPHRENVDILKLPTRRGTEIVAL
YVRYPMATSTLLYSHGNAADIGQMYELFIELSIHLRVNLMGYDYSGYGQSSGKPSEHNTY
ADIEAAYKCLEESFGAKQEDIILYGQSVGSGPTLDLAARLPRLRAVVLHSPILSGLRVMY
PVKRTYWFDIYKNIDKIPLVQCPVLVIHGTADEVVDCSHGKQLWELCKEKYEPLWLKGGN
HCDLELYPEYIKHLKKFISTVEKSPSRRSSARRSVDRPEYSRKSTDCYEAPRKSTDQAPR
KSTDQAPRKSTDRRDKPRRSTDRPEKLKLYDYKSNDVDKLEKLRTSLDQVERSRRSVEYN
DKSRRSINQQLERARKSVDWLDRIRAG

Transcript Sequence

Transcript ID

VIT_17s0000g09740.t01
Transcript Infomation

cdna chromosome:12X:17:11600235:11607173:1 gene:VIT_17s0000g09740 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GAAGAGCACAAAAAGAAGAAAGGAATGTCCATTTCTAGAGAGAGAGAGAGCAGACAACTC
TGATTTCAAGAGAGAGAAGGTAGAGGAAGAGAGGGAGAGAGGGGGAGAGGGAGAGAGAGA
GATGGGGGGTGTGACTTCATCCATGGCTGCCAAGTTGGCTTTCTTCCCACCAAACCCTCC
ATCCTACAAGCTAATTACGGACGATGCCACCGGCCTCTTGCTCTTCAACCACTTCCCCCA
CCGCGAAAACGTCGACATTTTGAAGCTTCCGACGCGCCGCGGCACCGAGATCGTGGCCCT
CTATGTGCGGTACCCCATGGCCACCTCTACGCTGCTCTATTCCCATGGGAATGCGGCTGA
TATCGGCCAGATGTACGAGCTCTTCATCGAGTTGAGCATTCACTTGCGGGTTAATCTCAT
GGGGTATGATTATTCTGGCTATGGGCAGTCTTCAGGAAAGCCAAGTGAGCACAATACTTA
TGCAGATATTGAAGCTGCATATAAATGTCTTGAAGAAAGCTTTGGTGCGAAGCAGGAAGA
CATCATCCTTTATGGTCAGTCTGTTGGAAGTGGGCCTACTTTGGATCTTGCAGCTCGTTT
GCCTCGATTAAGAGCTGTTGTTTTGCATAGTCCAATACTCTCAGGCTTACGAGTCATGTA
TCCTGTGAAACGTACATATTGGTTTGATATCTACAAGAATATTGACAAAATCCCATTGGT
GCAGTGCCCTGTACTAGTGATTCATGGCACAGCTGATGAAGTTGTTGACTGCTCTCATGG
CAAGCAGCTTTGGGAACTCTGCAAAGAGAAGTATGAACCCTTATGGTTAAAAGGGGGGAA
TCATTGTGATCTGGAGCTGTATCCAGAATACATTAAACATCTCAAGAAGTTCATATCCAC
AGTGGAAAAATCACCTTCCCGGAGGAGCAGTGCAAGGAGAAGTGTAGACCGGCCAGAATA
TTCCAGGAAGAGTACTGATTGTTATGAGGCTCCAAGGAAGAGCACAGATCAGGCTCCAAG
GAAGAGCACGGATCAGGCTCCAAGGAAGAGCACTGATAGGAGAGACAAACCAAGGCGGAG
CACTGACAGGCCTGAAAAACTGAAACTCTATGACTACAAGTCTAATGATGTTGACAAGCT
TGAGAAGTTAAGAACCTCTCTTGATCAGGTAGAGAGATCTCGGAGAAGCGTGGAATACAA
TGATAAGTCTCGGAGAAGCATCAACCAACAGTTGGAAAGAGCACGGAAGAGCGTGGATTG
GTTGGACAGAATACGTGCCGGATAAAGAGCATTGAGTTTATTCTGTGGGAGGGGAAATTA
AAAAAAGAAAAAACAGAATGAAGAAAGAAGAAATTACATGGCTTTTTTTTTTTTGTTTGT
TTGTTTAACTTATGGTTTCAGGTTTGTGTGTATTTTTGCTCTGGCTGGTTCCAGAATGAC
TGTCATGGAATGCAGAGTTTGATATAAACGGATTCATTATCCATATGATTGTAGTTCAAT
GGAAGTACCCTAACCTCTGTCTTTCATTGTAACCCTTTTAGAAGTAGTGTCATTCTTCGG
GTTCAGGGATGTTTTTGTATTTGAAGTGTTTAATTTTTTCCCATTTATCCAAAGACACCA
TGTTTGCTTCTCATTTGCAGCTGTCCATATTTGGTGAATCAGCATGTACTATAATGGTCA
TAGAAGCATGTGGCACAATCACTTATTTGGCCACTGAAAAATCTTCACCCATGTCTAGAG
TGGTTCCATTTTGGGATTTTTTTCTTATGGGACACAGCCTCTGCTACATTTCCCCCAATG
GTTCTTATCTCACGACCAAACTACCTGGAAATCCAAAACTTCTGCAACCTGAGCATCACA
CTAAACTTTGGCAGGAGATCTTTCAATATAAGAAAACTGTTACATCCATCAAAACCCAAG
AAGATTGAAGCAGGGGAGGATATCAGGTAACGATAAAAAATGGGTTGTGTCTCGAAAGCT
GAGTTTGAGTCATTTTGCATTGGTAAATTATTCTCGGAATTTCTGTTCATCTTGCATTTC
AGTTCCAGCCTTTAATTGGGTTTCCTCTCCGGAATTTTGCTGAAGATGATCTGTAAGACC
TGAGATGCAGGGTACTGCTGGGAGCATAGAAGTTGACCTCCAAACTAGCTCATGTTCAAT
GGAGAAGCAAGTTGGAAAGCTTGGTCAACAAGGTGTTGGATGTTTGCGATGTGTGCCATC
ATTATTAAAACCAATACTAGGCGAGTGCATAGC