Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g09710.t01
CDS Infomation

cds chromosome:12X:17:11534291:11536469:1 gene:VIT_17s0000g09710 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCCTCCATTTCATTTTCCGGCGAATCCCTCATCTCTCTGCTAACTCTTTTCTCTCTC
CTTTTTCTCACCCACGCCACCCTCCATCTCCACCCCTCCGATTATGACGCCCTCCTCCTC
ATCCAAAAACACTTGGGCATCAACGGTCAACGCCGCTCCTCCCCCAACCCATGCAACACC
CCCGGAGTATTTTGCGAGAGGAGAGTCTCTGACAACGCCACAGTGCTCAGAGTCACCCGT
CTGGTTTTCAAATCCCAACGTCTCTCAGGTTTCCTATCTCCCCAAATCGGACGCCTCTCC
CAGCTCAAAGAGCTCTCCCTCCCGGACAACTATCTCCTTGACCGGATCCCATCCCAAATT
GTTGACTGCCGGAAACTGGAAATCCTTGACCTCCGGAACAACCGATTCTCCGGCGAAATT
CCGCCGGAATTGTCCTCCCTGGTGCGCCTCCGTATCCTGGATCTCTCTTCCAATAAGTTT
TCCGGGAACTTGAATTTCTTGAGGTTTTTTCCCAACCTGGAGAAGCTCTCTCTGGCTGAA
AACCTGTTTTCCGGGAAAGTACCGGTGTCTGTACGCTCGTTTCGCAATCTTAGAGTCTTC
AACCTTTCCGGGAACAGCTTTCTGGAAGGCCCAGTGCCGGGGATGAGGGAGGTGGAGGTG
GAGTCCCTAGCGTCTGCACTTCCGAGACGATACGTCTTTGCTGAGAATTTAACAAGGGGA
AGTAGCAATCATTCAGCAGTTGCACCAAGTGGAAGTTCAGGGTATTATGGAGAAGCACCA
GCTCCTTCTCCTTCTGCACCACCTCATAAGCATCGGAAAAACAAGAAGCTGAGCGCATGG
ATTCTCGGATTCATCGCTGGAGCAGTTGCTGGGTGCATATCTGGGTTGGTGTTCTCCGTG
CTTTTTAAAGCACTCCTGGTGTTGGTGAGAGGTGGTGGAAAGGAGTCAGGGCCGGCAATC
TTCAGTCCGTTGATCAAAAAGGCGGAGGACTTGGCTTTCTTGGAGAAAGACGATGGATTG
GCATCACTGGAGATCATAGGCAAAGGTGGATGTGGAGAGGTGTACAGAGCTGAGTTACCA
GGTGGGAAACTGATTGCTATAAAGAAGATTGTTCAACCTCCAAAGGATGCAGCAGAACTG
GCTGAGGAAGACAGTAAGCTCTTGAACAAGAAGATGCGCCAAATTCGGTCGGAGATTCAA
ACTGTTGGGAATATTAGGCATCGAAACCTTCTTCCTTTGCTGGCACATGTGTCCCGGCCT
AACTGCCATTACCTGGTATATGAGTTCATGAAGAATGGCAGCTTACAGGACATGTTAACT
CAAGTTTCAGAGGGGACTAGAGAACTGGACTGGCTGGCTCGTCACAGGGTCGCACTAGGG
GTGGCTGCAGGGCTTGAATACCTCCATATGAGCCACAGCCCCCGCATCATTCATAGAGAC
CTCAAACCTGGAAACATCCTTCTCGATGATGACATGGAAGCACGAATTGCAGATTTTGGA
CTCGCAAAAGCAGTCCCAGATGCTAACACCCATGTCACAACTTCTAATGTGGCCGGAACT
GTGGGATACATTGCGCCCGAGTATCACCAGACACTCAAGTTTACAGACAAGTGCGACATA
TACAGCTTTGGGGTTTTGCTTGGGGTTCTGGTGGTAGGAAAGCTTCCATCTGATGACTTT
TTCCAGCACACAGCTGAGATGAGCTTGGTGAAGTGGATGGCTAATATAAGGACTTCAGAC
GATCCCAGCAGAGCCATTGATAGAAAGCTGATGGGAAATGGATTTGAAGAGCAGATGCTG
CTGGTTCTAAAGATAGCTTGCTTCTGCACTGTTGATGATGCAAAGATAAGGCCTAACAGT
AAGGACGTTAGGACCATGTTGTCTCAGATCAAACATTAG

Peptide Sequence

PEP ID

VIT_17s0000g09710.t01
PEP Infomation

pep chromosome:12X:17:11534291:11536469:1 gene:VIT_17s0000g09710 transcript:VIT_17s0000g09710.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MASISFSGESLISLLTLFSLLFLTHATLHLHPSDYDALLLIQKHLGINGQRRSSPNPCNT
PGVFCERRVSDNATVLRVTRLVFKSQRLSGFLSPQIGRLSQLKELSLPDNYLLDRIPSQI
VDCRKLEILDLRNNRFSGEIPPELSSLVRLRILDLSSNKFSGNLNFLRFFPNLEKLSLAE
NLFSGKVPVSVRSFRNLRVFNLSGNSFLEGPVPGMREVEVESLASALPRRYVFAENLTRG
SSNHSAVAPSGSSGYYGEAPAPSPSAPPHKHRKNKKLSAWILGFIAGAVAGCISGLVFSV
LFKALLVLVRGGGKESGPAIFSPLIKKAEDLAFLEKDDGLASLEIIGKGGCGEVYRAELP
GGKLIAIKKIVQPPKDAAELAEEDSKLLNKKMRQIRSEIQTVGNIRHRNLLPLLAHVSRP
NCHYLVYEFMKNGSLQDMLTQVSEGTRELDWLARHRVALGVAAGLEYLHMSHSPRIIHRD
LKPGNILLDDDMEARIADFGLAKAVPDANTHVTTSNVAGTVGYIAPEYHQTLKFTDKCDI
YSFGVLLGVLVVGKLPSDDFFQHTAEMSLVKWMANIRTSDDPSRAIDRKLMGNGFEEQML
LVLKIACFCTVDDAKIRPNSKDVRTMLSQIKH

Transcript Sequence

Transcript ID

VIT_17s0000g09710.t01
Transcript Infomation

cdna chromosome:12X:17:11534291:11536469:1 gene:VIT_17s0000g09710 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TAGCTTGACTTGGAAAATGAAGTCAAGAGGGCAGTTTTGGGAATCAAACAAACCGGCTGG
AGAAAATAAAGAAAACTACATGGCATGGGGCCACCACCCCAATATTTTCCACACGGACTT
GCGCGTTGCAAATACAACCAGTCTACCACCCAACAGTTTTTAAGCTCCATGCGCCTACCT
CCACCACCACCACTGCAAGCCGCTGCTCAATGGCCTCCATTTCATTTTCCGGCGAATCCC
TCATCTCTCTGCTAACTCTTTTCTCTCTCCTTTTTCTCACCCACGCCACCCTCCATCTCC
ACCCCTCCGATTATGACGCCCTCCTCCTCATCCAAAAACACTTGGGCATCAACGGTCAAC
GCCGCTCCTCCCCCAACCCATGCAACACCCCCGGAGTATTTTGCGAGAGGAGAGTCTCTG
ACAACGCCACAGTGCTCAGAGTCACCCGTCTGGTTTTCAAATCCCAACGTCTCTCAGGTT
TCCTATCTCCCCAAATCGGACGCCTCTCCCAGCTCAAAGAGCTCTCCCTCCCGGACAACT
ATCTCCTTGACCGGATCCCATCCCAAATTGTTGACTGCCGGAAACTGGAAATCCTTGACC
TCCGGAACAACCGATTCTCCGGCGAAATTCCGCCGGAATTGTCCTCCCTGGTGCGCCTCC
GTATCCTGGATCTCTCTTCCAATAAGTTTTCCGGGAACTTGAATTTCTTGAGGTTTTTTC
CCAACCTGGAGAAGCTCTCTCTGGCTGAAAACCTGTTTTCCGGGAAAGTACCGGTGTCTG
TACGCTCGTTTCGCAATCTTAGAGTCTTCAACCTTTCCGGGAACAGCTTTCTGGAAGGCC
CAGTGCCGGGGATGAGGGAGGTGGAGGTGGAGTCCCTAGCGTCTGCACTTCCGAGACGAT
ACGTCTTTGCTGAGAATTTAACAAGGGGAAGTAGCAATCATTCAGCAGTTGCACCAAGTG
GAAGTTCAGGGTATTATGGAGAAGCACCAGCTCCTTCTCCTTCTGCACCACCTCATAAGC
ATCGGAAAAACAAGAAGCTGAGCGCATGGATTCTCGGATTCATCGCTGGAGCAGTTGCTG
GGTGCATATCTGGGTTGGTGTTCTCCGTGCTTTTTAAAGCACTCCTGGTGTTGGTGAGAG
GTGGTGGAAAGGAGTCAGGGCCGGCAATCTTCAGTCCGTTGATCAAAAAGGCGGAGGACT
TGGCTTTCTTGGAGAAAGACGATGGATTGGCATCACTGGAGATCATAGGCAAAGGTGGAT
GTGGAGAGGTGTACAGAGCTGAGTTACCAGGTGGGAAACTGATTGCTATAAAGAAGATTG
TTCAACCTCCAAAGGATGCAGCAGAACTGGCTGAGGAAGACAGTAAGCTCTTGAACAAGA
AGATGCGCCAAATTCGGTCGGAGATTCAAACTGTTGGGAATATTAGGCATCGAAACCTTC
TTCCTTTGCTGGCACATGTGTCCCGGCCTAACTGCCATTACCTGGTATATGAGTTCATGA
AGAATGGCAGCTTACAGGACATGTTAACTCAAGTTTCAGAGGGGACTAGAGAACTGGACT
GGCTGGCTCGTCACAGGGTCGCACTAGGGGTGGCTGCAGGGCTTGAATACCTCCATATGA
GCCACAGCCCCCGCATCATTCATAGAGACCTCAAACCTGGAAACATCCTTCTCGATGATG
ACATGGAAGCACGAATTGCAGATTTTGGACTCGCAAAAGCAGTCCCAGATGCTAACACCC
ATGTCACAACTTCTAATGTGGCCGGAACTGTGGGATACATTGCGCCCGAGTATCACCAGA
CACTCAAGTTTACAGACAAGTGCGACATATACAGCTTTGGGGTTTTGCTTGGGGTTCTGG
TGGTAGGAAAGCTTCCATCTGATGACTTTTTCCAGCACACAGCTGAGATGAGCTTGGTGA
AGTGGATGGCTAATATAAGGACTTCAGACGATCCCAGCAGAGCCATTGATAGAAAGCTGA
TGGGAAATGGATTTGAAGAGCAGATGCTGCTGGTTCTAAAGATAGCTTGCTTCTGCACTG
TTGATGATGCAAAGATAAGGCCTAACAGTAAGGACGTTAGGACCATGTTGTCTCAGATCA
AACATTAGGGATGCAAGGGAACGTTGCTATATATAACTATCTATATGTGCCACTTGTATG
TAAGAATAATGATGCGTGT