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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g09690.t01
CDS Infomation

cds chromosome:12X:17:11466372:11469645:-1 gene:VIT_17s0000g09690 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein-L-isoaspartate O-methyltransferase [Source:UniProtKB/TrEMBL;Acc:D7SHF0]
Sequence

ATGGAGCGATTCTTTTCTGGAAGTGGGATCAATAAGAATAAAGCAATGGTGGAGCACTTG
CAGCGCTATGGAGTGATTAATTCGAAAAAGGTAGCTCAAGTAATGGAGACTGTTGACAGA
GCATTGTTTGTGCCTGATGGGAACCCACCTTATGTTGACAGCCCCATGCAGATAGGTTAC
AATGCCACTATTTCAGCACCTCATATGCATGCCACATGCCTCGAGCTGTTGCAGGAAAAT
TTGCAGCCTGGAATGCATGCTCTAGATGTTGGTTCTGGAACGGGGTATTTGACAGCCTGC
TTTGCACTGATGGTTGGACCACAAGGTTGTGCAGTTGGAGTAGAACACATACCTGAGTTG
GTTGCTTCTTCAATCAAGAATATCGAAAAGAGTGCAGCGGCTCCGTTATTAAAAGAAGGT
TCTCTCAAACTGCATGCCGGTGATGGAAGGCTAGGTTGGCCTGAGTGTGCACCATATGAT
GCAATTCACGTCGGAGCCGCAGCACCTGAGATACCACAGCCACTTATTGATCAGTTGAAG
CCCGGTGGTAGAATGGTCATTCCTGTTGGGAACATATTCCAGGATTTGAAGGTAGTGGAC
AAGAACCTGGACGGCTCCATCAGTATCCGCAGCGAGACTTCTGTCCGCTATGTTCCACTG
ACAAGTCGGGAGGCTCAGTTGCGCGATTATTGA

Peptide Sequence

PEP ID

VIT_17s0000g09690.t01
PEP Infomation

pep chromosome:12X:17:11466372:11469645:-1 gene:VIT_17s0000g09690 transcript:VIT_17s0000g09690.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein-L-isoaspartate O-methyltransferase [Source:UniProtKB/TrEMBL;Acc:D7SHF0]
Sequence

MERFFSGSGINKNKAMVEHLQRYGVINSKKVAQVMETVDRALFVPDGNPPYVDSPMQIGY
NATISAPHMHATCLELLQENLQPGMHALDVGSGTGYLTACFALMVGPQGCAVGVEHIPEL
VASSIKNIEKSAAAPLLKEGSLKLHAGDGRLGWPECAPYDAIHVGAAAPEIPQPLIDQLK
PGGRMVIPVGNIFQDLKVVDKNLDGSISIRSETSVRYVPLTSREAQLRDY

Transcript Sequence

Transcript ID

VIT_17s0000g09690.t01
Transcript Infomation

cdna chromosome:12X:17:11466372:11469645:-1 gene:VIT_17s0000g09690 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein-L-isoaspartate O-methyltransferase [Source:UniProtKB/TrEMBL;Acc:D7SHF0]
Sequence

TTGCCGCTATTGTGCGCCGCTTAACCACCTCTTAACCTTCACCCTCCACCAGCATCACCA
CCACCGGCACTCCCTCGCCATCTCTGCGCCCTCGACCACTCTATCTTGTCTGCATACCCC
AAATCCTAGGTTCCTAACGGGGAACTCTCTCGTTTTCAAGATGGAGCGATTCTTTTCTGG
AAGTGGGATCAATAAGAATAAAGCAATGGTGGAGCACTTGCAGCGCTATGGAGTGATTAA
TTCGAAAAAGGTAGCTCAAGTAATGGAGACTGTTGACAGAGCATTGTTTGTGCCTGATGG
GAACCCACCTTATGTTGACAGCCCCATGCAGATAGGTTACAATGCCACTATTTCAGCACC
TCATATGCATGCCACATGCCTCGAGCTGTTGCAGGAAAATTTGCAGCCTGGAATGCATGC
TCTAGATGTTGGTTCTGGAACGGGGTATTTGACAGCCTGCTTTGCACTGATGGTTGGACC
ACAAGGTTGTGCAGTTGGAGTAGAACACATACCTGAGTTGGTTGCTTCTTCAATCAAGAA
TATCGAAAAGAGTGCAGCGGCTCCGTTATTAAAAGAAGGTTCTCTCAAACTGCATGCCGG
TGATGGAAGGCTAGGTTGGCCTGAGTGTGCACCATATGATGCAATTCACGTCGGAGCCGC
AGCACCTGAGATACCACAGCCACTTATTGATCAGTTGAAGCCCGGTGGTAGAATGGTCAT
TCCTGTTGGGAACATATTCCAGGATTTGAAGGTAGTGGACAAGAACCTGGACGGCTCCAT
CAGTATCCGCAGCGAGACTTCTGTCCGCTATGTTCCACTGACAAGTCGGGAGGCTCAGTT
GCGCGATTATTGAGCCTTCACCTTAACTTGAATAACGTGGCGCTGGGCAACAATTTGTTG
CTCATTGGTTATAGTGTCTTTCAAAGTTCTGCTTCTGCGTAGTTGGTTTAAAGTCTAGGT
TTGGAACTGTCTTTGTAAATTCTCCTGCTGCTAATGAAACTTGGCCTAGTTAATAAATTT
TTAGTCTGCAATTAGTATGGACTTTTGAGTT