Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g09610.t01
CDS Infomation

cds chromosome:12X:17:11349860:11351636:1 gene:VIT_17s0000g09610 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTCTCCTTCAATGGCTGAAGGAAGGTTTCCTACCCTCCTTCCTCTTTGCAGGCATT
ATTCTAGTAGCGGTGCTGAAGTTTCTTCAGAAGGGCATGTTAAGAAAAAGAAAATTCAAT
CTCCCACCCAGCCCTCGGAAGCTACCCATCATTGGCAACCTTCATCAGCTTGGCAACATG
CCCCACATTTCTCTCCACCGCCTGGCTCAGAAGTTCGGCCCCATCATTTTCCTGCAACTT
GGAGAGGTGCCAACAGTGGTAGTTTCTTCCGCTAGAGTAGCGAAAGAAGTGATGAAGACC
CATGATCTGGCTCTTTCAAGCCGCCCCCAGATCTTTTCAGCAAAACACCTCTTCTATGAT
TGCACTGATATTGTGTTCTCTCCCTATAGTGCTTACTGGAGGCATCTACGGAAAATTTGC
ATACTTGAGCTACTGAGTGCCAAAAGGGTCCAATCATTTAGTTTTGTCAGAGAAGAAGAA
GTTGCTCGCATGGTTCATCGGATTGCAGAGTCGTATCCCTGCCCCACCAATTTAACCAAG
ATTCTTGGACTCTATGCAAATGATGTCCTTTGCAGGGTCGCCTTTGGAAGGGATTTCTCA
GCAGGAGGGGAGTATGATAGACATGGGTTCCAAACGATGCTCGAGGAGTATCAAGTATTG
CTTGGAGGATTTAGTGTGGGAGATTTCTTCCCTTCCATGGAGTTTATACACAGCTTAACA
GGCATGAAATCAAGACTACAAAACACCTTTCGACGTTTTGATCACTTTTTTGACGAGGTG
GTGAAGGAACATCTCGATCCCGAGAGAAAGAAAGAGGAACACAAGGACCTCGTTGATGTT
TTACTCCATGTCAAGGAGGAAGGCGCTACCGAAATGCCTCTCACCATGGATAATGTCAAG
GCCATCATCTTGGATATGTTTGCTGCAGGAACTGATACAACCTTCATAACCCTAGATTGG
GGAATGACAGAGCTCATCATGAACCCTAAAGTCATGGAAAGAGCACAGGCTGAAGTCAGA
AGCATTGTTGGAGAGAGAAGAGTTGTGACAGAGAGTGATCTTCCACAACTGCACTACATG
AAAGCCGTCATCAAAGAGATCTTCCGATTGCACCCTCCAGCACCAGTTTTAGTCCCAAGA
GAATCCATGGAAGATGTAACAATTGATGGGTACAATATTCCAGCCAAAACAAGGTTTTTT
GTTAATGCCTGGGCAATAGGGAGAGACCCAGAATCCTGGCGAAACCCTGAATCATTTGAA
CCACAAAGATTCATGGGTAGTACTATTGACTTCAAAGGCCAGGATTTTGAGTTGATACCT
TTTGGGGCTGGGAGAAGAAGCTGCCCAGCTATTACATTTGGAGCAGCAACTGTTGAGCTT
GCTCTTGCTCAACTTCTCCACAGCTTTGATTGGGAGCTTCCCCCTGGCATCCAAGCTCAA
GATTTGGATATGACAGAAGTTTTCGGCATCACAATGCACAGGATAGCTAACCTAATCGTG
CTTGCAAAACCACGCTTTCCCTAG

Peptide Sequence

PEP ID

VIT_17s0000g09610.t01
PEP Infomation

pep chromosome:12X:17:11349860:11351636:1 gene:VIT_17s0000g09610 transcript:VIT_17s0000g09610.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MALLQWLKEGFLPSFLFAGIILVAVLKFLQKGMLRKRKFNLPPSPRKLPIIGNLHQLGNM
PHISLHRLAQKFGPIIFLQLGEVPTVVVSSARVAKEVMKTHDLALSSRPQIFSAKHLFYD
CTDIVFSPYSAYWRHLRKICILELLSAKRVQSFSFVREEEVARMVHRIAESYPCPTNLTK
ILGLYANDVLCRVAFGRDFSAGGEYDRHGFQTMLEEYQVLLGGFSVGDFFPSMEFIHSLT
GMKSRLQNTFRRFDHFFDEVVKEHLDPERKKEEHKDLVDVLLHVKEEGATEMPLTMDNVK
AIILDMFAAGTDTTFITLDWGMTELIMNPKVMERAQAEVRSIVGERRVVTESDLPQLHYM
KAVIKEIFRLHPPAPVLVPRESMEDVTIDGYNIPAKTRFFVNAWAIGRDPESWRNPESFE
PQRFMGSTIDFKGQDFELIPFGAGRRSCPAITFGAATVELALAQLLHSFDWELPPGIQAQ
DLDMTEVFGITMHRIANLIVLAKPRFP

Transcript Sequence

Transcript ID

VIT_17s0000g09610.t01
Transcript Infomation

cdna chromosome:12X:17:11349860:11351636:1 gene:VIT_17s0000g09610 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GAAGCTCCAATGGCTCTCCTTCAATGGCTGAAGGAAGGTTTCCTACCCTCCTTCCTCTTT
GCAGGCATTATTCTAGTAGCGGTGCTGAAGTTTCTTCAGAAGGGCATGTTAAGAAAAAGA
AAATTCAATCTCCCACCCAGCCCTCGGAAGCTACCCATCATTGGCAACCTTCATCAGCTT
GGCAACATGCCCCACATTTCTCTCCACCGCCTGGCTCAGAAGTTCGGCCCCATCATTTTC
CTGCAACTTGGAGAGGTGCCAACAGTGGTAGTTTCTTCCGCTAGAGTAGCGAAAGAAGTG
ATGAAGACCCATGATCTGGCTCTTTCAAGCCGCCCCCAGATCTTTTCAGCAAAACACCTC
TTCTATGATTGCACTGATATTGTGTTCTCTCCCTATAGTGCTTACTGGAGGCATCTACGG
AAAATTTGCATACTTGAGCTACTGAGTGCCAAAAGGGTCCAATCATTTAGTTTTGTCAGA
GAAGAAGAAGTTGCTCGCATGGTTCATCGGATTGCAGAGTCGTATCCCTGCCCCACCAAT
TTAACCAAGATTCTTGGACTCTATGCAAATGATGTCCTTTGCAGGGTCGCCTTTGGAAGG
GATTTCTCAGCAGGAGGGGAGTATGATAGACATGGGTTCCAAACGATGCTCGAGGAGTAT
CAAGTATTGCTTGGAGGATTTAGTGTGGGAGATTTCTTCCCTTCCATGGAGTTTATACAC
AGCTTAACAGGCATGAAATCAAGACTACAAAACACCTTTCGACGTTTTGATCACTTTTTT
GACGAGGTGGTGAAGGAACATCTCGATCCCGAGAGAAAGAAAGAGGAACACAAGGACCTC
GTTGATGTTTTACTCCATGTCAAGGAGGAAGGCGCTACCGAAATGCCTCTCACCATGGAT
AATGTCAAGGCCATCATCTTGGATATGTTTGCTGCAGGAACTGATACAACCTTCATAACC
CTAGATTGGGGAATGACAGAGCTCATCATGAACCCTAAAGTCATGGAAAGAGCACAGGCT
GAAGTCAGAAGCATTGTTGGAGAGAGAAGAGTTGTGACAGAGAGTGATCTTCCACAACTG
CACTACATGAAAGCCGTCATCAAAGAGATCTTCCGATTGCACCCTCCAGCACCAGTTTTA
GTCCCAAGAGAATCCATGGAAGATGTAACAATTGATGGGTACAATATTCCAGCCAAAACA
AGGTTTTTTGTTAATGCCTGGGCAATAGGGAGAGACCCAGAATCCTGGCGAAACCCTGAA
TCATTTGAACCACAAAGATTCATGGGTAGTACTATTGACTTCAAAGGCCAGGATTTTGAG
TTGATACCTTTTGGGGCTGGGAGAAGAAGCTGCCCAGCTATTACATTTGGAGCAGCAACT
GTTGAGCTTGCTCTTGCTCAACTTCTCCACAGCTTTGATTGGGAGCTTCCCCCTGGCATC
CAAGCTCAAGATTTGGATATGACAGAAGTTTTCGGCATCACAATGCACAGGATAGCTAAC
CTAATCGTGCTTGCAAAACCACGCTTTCCCTAGGATAATACCATGCCAATCAACAAGTCA
GGTCATGTTCGATTACAATAATTTCAAGGTTCATCCTAAATTCAACATCTAGTCATCTAT
CCAGTTTCTCTATGATGAATGTTACATG