Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g09500.t01
CDS Infomation

cds chromosome:12X:17:11172396:11176645:-1 gene:VIT_17s0000g09500 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGATGGTGGAGCGCGTGACCGAGTTTCCTCACACGCACATGGATCGCCGGCCGAGG
AAGAGGCCGCGTTTGGGATGGGATGTTCTTCCTCAGGCTCCGAAGGCTCAGCTAGGGATG
TTTTGTGGACAAGAGGTTGGGAATGTGGCAAGCTTTGCACCTTCAAAGGCACACTCCGAC
CAAACTACTAGTTCTATGTTTGTAAAGGGAGTAGCTCGAAATGGTTCTCCCCCATGGCGA
GAAGATGACAAAGATGGCCATTACATATTTGCGCTTGGAGAAAATTTAACTTCTCGCTAT
AAGATCAACAGCAAGATGGGCGAAGGAACCTTTGGTCAGGTTTTGGAATGCTGGGACAGA
GAGAGGAAGGAAATGGTTGCCGTCAAAATTGTCCGTGGTATTAAGAAGTATCGTGAGGCT
GCCATGATTGAAATTGAAGTCTTACAACAGCTTGCTAAACATGACAAGGGTGGCAATCGT
TGTGTGCAAATACGGAACTGGTTTGACTATCGTAACCATATCTGTATTGTGTTTGAGAAG
CTTGGACCAAGCTTATACGATTTTCTACGGAAAAACAATTATCGCTCATTTCCCATTGAT
CTTGTCCGTGAGATTGGCAGACAACTGTTGGAATGTGTAGCATTTATGCATGATTTACGC
CTCATACATACGGATTTGAAGCCTGAGAATATACTTCTAGTGTCTCCAGAATATGTTAAA
GTTCCAGACTACAAGGTTTCATCCCGTTCACCCAAGGATGGTTCTTACTTTAAGAGAGTA
CCAAAATCAAGTGCTATTAAAGTGATTGATTTTGGAAGCACAACATATGAGCGACAAGAT
CAGAACTACATTGTATCAACACGGCATTATCGTGCGCCAGAGGTTATTCTTGGGCTTGGA
TGGAGTTATCCATGTGATATATGGAGTGTTGGATGTATCTTGGTGGAGTTATGCACGGGA
GAAGCATTGTTTCAGACTCATGAGAATCTGGAGCACCTTGCCATGATGGAAAGGGTGTTG
GGTCCACTGCCGCAGCACATGCTGAAGAGAGTAGACCGACATGCAGAGAAGTATGTACGA
AGGGGTAGATTGGACTGGCCAGAAGGTGCGACTTCAAGGGAAAGTATCAAAGCTGTTCTC
AAGCTACCTCGCCTTCAGAACCTAATAATGCAGCATGTGGACCATTCGGCTGGAGATCTA
ATACATCTGTTGCAAGGTCTTCTTAGATATGACCCTTCAGACCGATTGACAGCCCTTGGA
GCCCTAAGGCATCCCTTCTTTACAAGGGATCACCTCAGGAGGTCTTGA

Peptide Sequence

PEP ID

VIT_17s0000g09500.t01
PEP Infomation

pep chromosome:12X:17:11172396:11176645:-1 gene:VIT_17s0000g09500 transcript:VIT_17s0000g09500.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEMVERVTEFPHTHMDRRPRKRPRLGWDVLPQAPKAQLGMFCGQEVGNVASFAPSKAHSD
QTTSSMFVKGVARNGSPPWREDDKDGHYIFALGENLTSRYKINSKMGEGTFGQVLECWDR
ERKEMVAVKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEK
LGPSLYDFLRKNNYRSFPIDLVREIGRQLLECVAFMHDLRLIHTDLKPENILLVSPEYVK
VPDYKVSSRSPKDGSYFKRVPKSSAIKVIDFGSTTYERQDQNYIVSTRHYRAPEVILGLG
WSYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVR
RGRLDWPEGATSRESIKAVLKLPRLQNLIMQHVDHSAGDLIHLLQGLLRYDPSDRLTALG
ALRHPFFTRDHLRRS

Transcript Sequence

Transcript ID

VIT_17s0000g09500.t01
Transcript Infomation

cdna chromosome:12X:17:11172396:11176645:-1 gene:VIT_17s0000g09500 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TATGGAGATGGTGGAGCGCGTGACCGAGTTTCCTCACACGCACATGGATCGCCGGCCGAG
GAAGAGGCCGCGTTTGGGATGGGATGTTCTTCCTCAGGCTCCGAAGGCTCAGCTAGGGAT
GTTTTGTGGACAAGAGGTTGGGAATGTGGCAAGCTTTGCACCTTCAAAGGCACACTCCGA
CCAAACTACTAGTTCTATGTTTGTAAAGGGAGTAGCTCGAAATGGTTCTCCCCCATGGCG
AGAAGATGACAAAGATGGCCATTACATATTTGCGCTTGGAGAAAATTTAACTTCTCGCTA
TAAGATCAACAGCAAGATGGGCGAAGGAACCTTTGGTCAGGTTTTGGAATGCTGGGACAG
AGAGAGGAAGGAAATGGTTGCCGTCAAAATTGTCCGTGGTATTAAGAAGTATCGTGAGGC
TGCCATGATTGAAATTGAAGTCTTACAACAGCTTGCTAAACATGACAAGGGTGGCAATCG
TTGTGTGCAAATACGGAACTGGTTTGACTATCGTAACCATATCTGTATTGTGTTTGAGAA
GCTTGGACCAAGCTTATACGATTTTCTACGGAAAAACAATTATCGCTCATTTCCCATTGA
TCTTGTCCGTGAGATTGGCAGACAACTGTTGGAATGTGTAGCATTTATGCATGATTTACG
CCTCATACATACGGATTTGAAGCCTGAGAATATACTTCTAGTGTCTCCAGAATATGTTAA
AGTTCCAGACTACAAGGTTTCATCCCGTTCACCCAAGGATGGTTCTTACTTTAAGAGAGT
ACCAAAATCAAGTGCTATTAAAGTGATTGATTTTGGAAGCACAACATATGAGCGACAAGA
TCAGAACTACATTGTATCAACACGGCATTATCGTGCGCCAGAGGTTATTCTTGGGCTTGG
ATGGAGTTATCCATGTGATATATGGAGTGTTGGATGTATCTTGGTGGAGTTATGCACGGG
AGAAGCATTGTTTCAGACTCATGAGAATCTGGAGCACCTTGCCATGATGGAAAGGGTGTT
GGGTCCACTGCCGCAGCACATGCTGAAGAGAGTAGACCGACATGCAGAGAAGTATGTACG
AAGGGGTAGATTGGACTGGCCAGAAGGTGCGACTTCAAGGGAAAGTATCAAAGCTGTTCT
CAAGCTACCTCGCCTTCAGAACCTAATAATGCAGCATGTGGACCATTCGGCTGGAGATCT
AATACATCTGTTGCAAGGTCTTCTTAGATATGACCCTTCAGACCGATTGACAGCCCTTGG
AGCCCTAAGGCATCCCTTCTTTACAAGGGATCACCTCAGGAGGTCTTGACTTTGAGAGCA
CATTGATCAGGATGCATTGCTGGACAGACTTTTGACGGAGAGCACATTAACCACAAAGTT
CCTTTTGGTGATGTAGAGCCCAAGTTTACAAGAGGCTCTCTGCTCGTGTAAATATGTCCA
TTGTTATACAAGATGAAAGATTAGTCCCCATCATCTCAATTTCCTTAAAAATGTTGGGGC
TATTCTAGCCAAGACAATTCTC