Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g09040.t01
CDS Infomation

cds chromosome:12X:17:10603765:10605601:-1 gene:VIT_17s0000g09040 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAACTTCAAATATTGAGGCTCCCGCAATTCTCTAAGCTTCTCTTTGAACTCTCAAAG
ATTCATCAAACCTTACCCAGAACCAAAAAATTACATGCCTTCATAATCAGGAACCACCTC
TCAGATGACCCATTTTATGCTACTAGAATCCTCAGATTCTATGCTATTAACAGTGATCTG
TGCTCTGCCCGTAACCTGTTCGATGGAACTTCTTATAGAAGCGTCTACCTTTGGAATTCT
GTTATCAGAGCTTATGCAGGAGAGCATCAATTTGATGATGCATTGTTGCTGTTTGCAAAG
ATGCTTAGAACAGAAATCAAACCTGATAGCTTCACCTTTGCATGTGTTTTGCGGGCGTGT
GCTGAAAATTTTGATCCAGATGGATTGAGAGTGGTACATGGAGGAGTTGTGGTTTCCGGG
TTAGGATTTGACTCAGTTTGTGGTAGTGCACTGGTGACTGCCTATTCAAAACTATGCATG
GTTGATGAAGCAAGTAGGGTATTCTATGGAATGGCAGAGCCGGATTTAGTTTTGTGGAAT
GCAATGGCTGCTGGTTATGGTTATTGTGGATTCTGGGATAAAGGGCTGCAACTGTTTAGT
GCAATGCGAAGCATGGGGGAGCAGCCAGATAGTTACACTATGGTAGGATTGATCTCAGGC
TTAGCAGATCCAAGCTTGCTTGGAATAGGAAAAGGAATTCATGGTTTTTGTTTGAAAAGT
AGTTTTGATTGTAATGATCATGTGGGCAGTGCACTTGTGAGCATGTACTCAAGATGTCAT
TGCTTAAATTCAGCATATGGAGTTTTTACCATTTTATCTCAACCTGATTTAGTTACATGG
TCGGCTTTGATAACTGGATTGTCCAAGAGTGGAGACTATGAGAAAGCACTGCTCTTCTTC
AGGAAAATGAATATGGAAGGTAAAAGGGTGGATCCCATATTGATTGCTAGTGTACTGGCA
GCTTCTGGTCAATCAGCAATTTTAGGGCCTGGTAGTGAGATTCATGGATATGTTCTCCGA
CATGGGCTTGAGTCTGAAGTCATGATTTCCTCTGCTCTCATTGACATGTACTCTAAGTGT
GGTTTTGTAAACTTGGGAGTTAGGGTATTTGACTCCATGCCTAACCGAAATACAGTGTCC
TACAATTCGATGATTTTAGGTCTTGGAATACATGGACTTGCCCCACAGGCCTTCAAAATG
TTTGAAGAGGTATTAGAGAAAGGATTTAAACCTGATGAATCCACATTCTCTGCTCTGCTC
TGTACTTGCTGTCATGCTGGCCTTGTTAAAAATGGAAGGGAAATTTTCAGTAGAATGACA
GAAGAGTTTCACATCCAAGCTAGAACTGATCATTATGTTCACATGGTAAAGCTTCTTGGA
ATGGCTGGAGAGTTGCAAGAGGCTTACGATCTTATCCTGTCATTGCAGCAACCAGTAGAT
TCTGGCATTTGGGGAGCACTGTTGTCATGCTGCAATTTTCATGGAAATCCTGAGCTGGCA
GAAATTGTGGCTCAGCAGCTCTTTGAAAATAAACCAGAGAAAAGTGCATACAGAGTAATG
CTTTCCAATATATATGCTGGTGATGATAGATGGGATGATGTGAAGAAGTTGAGAGATGAT
ATTCAAGAAGCGGGAATAAAGAAAATGCCGGGGCTTAGCTGGATTGGAGTTGGTCGTATC
TAA

Peptide Sequence

PEP ID

VIT_17s0000g09040.t01
PEP Infomation

pep chromosome:12X:17:10603765:10605601:-1 gene:VIT_17s0000g09040 transcript:VIT_17s0000g09040.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MKLQILRLPQFSKLLFELSKIHQTLPRTKKLHAFIIRNHLSDDPFYATRILRFYAINSDL
CSARNLFDGTSYRSVYLWNSVIRAYAGEHQFDDALLLFAKMLRTEIKPDSFTFACVLRAC
AENFDPDGLRVVHGGVVVSGLGFDSVCGSALVTAYSKLCMVDEASRVFYGMAEPDLVLWN
AMAAGYGYCGFWDKGLQLFSAMRSMGEQPDSYTMVGLISGLADPSLLGIGKGIHGFCLKS
SFDCNDHVGSALVSMYSRCHCLNSAYGVFTILSQPDLVTWSALITGLSKSGDYEKALLFF
RKMNMEGKRVDPILIASVLAASGQSAILGPGSEIHGYVLRHGLESEVMISSALIDMYSKC
GFVNLGVRVFDSMPNRNTVSYNSMILGLGIHGLAPQAFKMFEEVLEKGFKPDESTFSALL
CTCCHAGLVKNGREIFSRMTEEFHIQARTDHYVHMVKLLGMAGELQEAYDLILSLQQPVD
SGIWGALLSCCNFHGNPELAEIVAQQLFENKPEKSAYRVMLSNIYAGDDRWDDVKKLRDD
IQEAGIKKMPGLSWIGVGRI

Transcript Sequence

Transcript ID

VIT_17s0000g09040.t01
Transcript Infomation

cdna chromosome:12X:17:10603765:10605601:-1 gene:VIT_17s0000g09040 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAACTTCAAATATTGAGGCTCCCGCAATTCTCTAAGCTTCTCTTTGAACTCTCAAAG
ATTCATCAAACCTTACCCAGAACCAAAAAATTACATGCCTTCATAATCAGGAACCACCTC
TCAGATGACCCATTTTATGCTACTAGAATCCTCAGATTCTATGCTATTAACAGTGATCTG
TGCTCTGCCCGTAACCTGTTCGATGGAACTTCTTATAGAAGCGTCTACCTTTGGAATTCT
GTTATCAGAGCTTATGCAGGAGAGCATCAATTTGATGATGCATTGTTGCTGTTTGCAAAG
ATGCTTAGAACAGAAATCAAACCTGATAGCTTCACCTTTGCATGTGTTTTGCGGGCGTGT
GCTGAAAATTTTGATCCAGATGGATTGAGAGTGGTACATGGAGGAGTTGTGGTTTCCGGG
TTAGGATTTGACTCAGTTTGTGGTAGTGCACTGGTGACTGCCTATTCAAAACTATGCATG
GTTGATGAAGCAAGTAGGGTATTCTATGGAATGGCAGAGCCGGATTTAGTTTTGTGGAAT
GCAATGGCTGCTGGTTATGGTTATTGTGGATTCTGGGATAAAGGGCTGCAACTGTTTAGT
GCAATGCGAAGCATGGGGGAGCAGCCAGATAGTTACACTATGGTAGGATTGATCTCAGGC
TTAGCAGATCCAAGCTTGCTTGGAATAGGAAAAGGAATTCATGGTTTTTGTTTGAAAAGT
AGTTTTGATTGTAATGATCATGTGGGCAGTGCACTTGTGAGCATGTACTCAAGATGTCAT
TGCTTAAATTCAGCATATGGAGTTTTTACCATTTTATCTCAACCTGATTTAGTTACATGG
TCGGCTTTGATAACTGGATTGTCCAAGAGTGGAGACTATGAGAAAGCACTGCTCTTCTTC
AGGAAAATGAATATGGAAGGTAAAAGGGTGGATCCCATATTGATTGCTAGTGTACTGGCA
GCTTCTGGTCAATCAGCAATTTTAGGGCCTGGTAGTGAGATTCATGGATATGTTCTCCGA
CATGGGCTTGAGTCTGAAGTCATGATTTCCTCTGCTCTCATTGACATGTACTCTAAGTGT
GGTTTTGTAAACTTGGGAGTTAGGGTATTTGACTCCATGCCTAACCGAAATACAGTGTCC
TACAATTCGATGATTTTAGGTCTTGGAATACATGGACTTGCCCCACAGGCCTTCAAAATG
TTTGAAGAGGTATTAGAGAAAGGATTTAAACCTGATGAATCCACATTCTCTGCTCTGCTC
TGTACTTGCTGTCATGCTGGCCTTGTTAAAAATGGAAGGGAAATTTTCAGTAGAATGACA
GAAGAGTTTCACATCCAAGCTAGAACTGATCATTATGTTCACATGGTAAAGCTTCTTGGA
ATGGCTGGAGAGTTGCAAGAGGCTTACGATCTTATCCTGTCATTGCAGCAACCAGTAGAT
TCTGGCATTTGGGGAGCACTGTTGTCATGCTGCAATTTTCATGGAAATCCTGAGCTGGCA
GAAATTGTGGCTCAGCAGCTCTTTGAAAATAAACCAGAGAAAAGTGCATACAGAGTAATG
CTTTCCAATATATATGCTGGTGATGATAGATGGGATGATGTGAAGAAGTTGAGAGATGAT
ATTCAAGAAGCGGGAATAAAGAAAATGCCGGGGCTTAGCTGGATTGGAGTTGGTCGTATC
TAATCATTGAACTGCCAAAATGAATACTTAATCAGACCTTTGCATGGGGCTACAATGATG
TTAATAGTCAGACTCACTGTATCTGCAACTGGAAGCTTTTTGGAGAGGTGAGTCTGGAAA
CCCTTTTTATCAGTATCAGTATGCATCACTTCAATAG