Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g08990.t01
CDS Infomation

cds chromosome:12X:17:10559960:10564744:1 gene:VIT_17s0000g08990 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAGCATATTGAAGGATATTTGAGGGTCTCTCTGTTTCTCTCAGAGATGGGTAAGCTT
TCCGGCGTCTTCTCCTTGAGGCATTTCCTGGTGCTCTCACTCGCCTTGAATGTGGCCTTG
ATTTCTAGAGTCGTATATGAGGGTGAGAATTGGAGGGAAGAACAGATCAGAGCGTTAATG
GCGGATGCCTCAGAAAAATCAGCGCATGTTAGCATGAGCAGCCCCCCTCCGCCGTCACCA
TCAACGCCATCGTCTATGGCCGTCACCAGCACAGAGATTAAAGATGACGGCGAAAGAGTG
ATCAATCTCGACCATGGGGATCCGACAATGTATGAGAGGTTTTGGCAACAAATGGGGGAC
ATAACAACCATTGTGATCTCTGGGTGGCAGTCCATGAGTTATTTTTCAGATGTGAAGAAC
CTATGCTGGTTTTTGGAGCCTGAGTTTGCCAAGCAGATCATTAGATTACACAAAATTGTG
GGAAATGCAGTCACTGACAACTATTACATCGTGGTCGGAACAGGTTCCACACAGCTCTTT
CAGGCTGCATTATATGCTCTCTCTCCACCCAATGCATCTGAGCCCATGAGCGTGGTATCT
GCAGCCCCATTTTACTCGTCCTACCCATCTGTGACGGATTTTCTCAAGTCAGGGCTCTAT
AAATGGGCTGGTGATGCCAACAATTTCAACAAAGATGGTCCATACATTGAGCTTGTTACT
TCCCCTAATAATCCTGATGGATCAATAAGGCAACCTGTTGTCAACCGAAGTGGGGAGAAT
TTGGTTCATGATTTTGCTTACTACTGGCCACAGTACACTCCAATTTCTTCTCCTGCAGAC
CATGATCTCATGTTGTTCACTGTCTCAAAAGCCACTGGCCATGCTGGGATGCGCCTTGGT
TGGGCTCTTGTGAAGGATAAAGAGGTTGCAAAGAAGATGACTAGCTTCATAGAGCTGAAC
ACGATTGGTGTATCAAAAGACTCGCAGCAGCGAGCTGCCAAAATTCTGCAAGTTATTTCT
GATAGCTATGAACCTGTTGGCAACCCAAAACAAAGTGGACCTTTCTTTCACTTTAGCCAT
AGCATGATGGAAGAGAGGTGGAAAGCGCTGAGGTCAGCAGTAAAACAGAGTGGGCTCTTC
AGTCTCCCTGAGTTTCCTTCCAGCTTCTGCAACTTCTTGGGTCAAGCTTTTGGATCACAG
CCTGCTTTTGCATGGCTAAAGTGTGAAGGAGGCATTGAGGACTGCGGAAATTTCCTCAAG
AGGCATAAGATTTTGACCCGGAACGGGAAGCATTTTGGGGCTAGCCCAGAGTATGTTCGG
GTGAGCATGCTGGACAGGGATGAGTCCTTTAATCTCTTTACCAAGAGATTGTCCAGTCTC
CATCTCAGCCAGTCCAAAGATCATGAGAAAGAAAGTCCCTGA

Peptide Sequence

PEP ID

VIT_17s0000g08990.t01
PEP Infomation

pep chromosome:12X:17:10559960:10564744:1 gene:VIT_17s0000g08990 transcript:VIT_17s0000g08990.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MKHIEGYLRVSLFLSEMGKLSGVFSLRHFLVLSLALNVALISRVVYEGENWREEQIRALM
ADASEKSAHVSMSSPPPPSPSTPSSMAVTSTEIKDDGERVINLDHGDPTMYERFWQQMGD
ITTIVISGWQSMSYFSDVKNLCWFLEPEFAKQIIRLHKIVGNAVTDNYYIVVGTGSTQLF
QAALYALSPPNASEPMSVVSAAPFYSSYPSVTDFLKSGLYKWAGDANNFNKDGPYIELVT
SPNNPDGSIRQPVVNRSGENLVHDFAYYWPQYTPISSPADHDLMLFTVSKATGHAGMRLG
WALVKDKEVAKKMTSFIELNTIGVSKDSQQRAAKILQVISDSYEPVGNPKQSGPFFHFSH
SMMEERWKALRSAVKQSGLFSLPEFPSSFCNFLGQAFGSQPAFAWLKCEGGIEDCGNFLK
RHKILTRNGKHFGASPEYVRVSMLDRDESFNLFTKRLSSLHLSQSKDHEKESP

Transcript Sequence

Transcript ID

VIT_17s0000g08990.t01
Transcript Infomation

cdna chromosome:12X:17:10559960:10564744:1 gene:VIT_17s0000g08990 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTTTTGCAAGTCTGCAAGTGAATACACCCGCTTTTCTCGTACTTTCATATATATATATGG
ATGGGCAAAGTAGAGTGATTAAAATATACAAGAACGAAAAATAGTTAAACATTGAATCTA
AGCTGAGTGCGGGGGTGGTTTTCGAGATCCAGCGTCGTGAAACTGCGAATTCCCAGGAGA
ATCGAGAGCTGATTTCTTGATTGTAGAAGAAATCTGCTGTCGGAAGTGTTTTCAAGGGAG
CTATGAATGTAATACACCCATTTATAGTGCCTTCAACGTCTGTCTCTGTCTCGAAAATTA
GAATTTGATTTTGTGAGCCAGCAATGAAGCATATTGAAGGATATTTGAGGGTCTCTCTGT
TTCTCTCAGAGATGGGTAAGCTTTCCGGCGTCTTCTCCTTGAGGCATTTCCTGGTGCTCT
CACTCGCCTTGAATGTGGCCTTGATTTCTAGAGTCGTATATGAGGGTGAGAATTGGAGGG
AAGAACAGATCAGAGCGTTAATGGCGGATGCCTCAGAAAAATCAGCGCATGTTAGCATGA
GCAGCCCCCCTCCGCCGTCACCATCAACGCCATCGTCTATGGCCGTCACCAGCACAGAGA
TTAAAGATGACGGCGAAAGAGTGATCAATCTCGACCATGGGGATCCGACAATGTATGAGA
GGTTTTGGCAACAAATGGGGGACATAACAACCATTGTGATCTCTGGGTGGCAGTCCATGA
GTTATTTTTCAGATGTGAAGAACCTATGCTGGTTTTTGGAGCCTGAGTTTGCCAAGCAGA
TCATTAGATTACACAAAATTGTGGGAAATGCAGTCACTGACAACTATTACATCGTGGTCG
GAACAGGTTCCACACAGCTCTTTCAGGCTGCATTATATGCTCTCTCTCCACCCAATGCAT
CTGAGCCCATGAGCGTGGTATCTGCAGCCCCATTTTACTCGTCCTACCCATCTGTGACGG
ATTTTCTCAAGTCAGGGCTCTATAAATGGGCTGGTGATGCCAACAATTTCAACAAAGATG
GTCCATACATTGAGCTTGTTACTTCCCCTAATAATCCTGATGGATCAATAAGGCAACCTG
TTGTCAACCGAAGTGGGGAGAATTTGGTTCATGATTTTGCTTACTACTGGCCACAGTACA
CTCCAATTTCTTCTCCTGCAGACCATGATCTCATGTTGTTCACTGTCTCAAAAGCCACTG
GCCATGCTGGGATGCGCCTTGGTTGGGCTCTTGTGAAGGATAAAGAGGTTGCAAAGAAGA
TGACTAGCTTCATAGAGCTGAACACGATTGGTGTATCAAAAGACTCGCAGCAGCGAGCTG
CCAAAATTCTGCAAGTTATTTCTGATAGCTATGAACCTGTTGGCAACCCAAAACAAAGTG
GACCTTTCTTTCACTTTAGCCATAGCATGATGGAAGAGAGGTGGAAAGCGCTGAGGTCAG
CAGTAAAACAGAGTGGGCTCTTCAGTCTCCCTGAGTTTCCTTCCAGCTTCTGCAACTTCT
TGGGTCAAGCTTTTGGATCACAGCCTGCTTTTGCATGGCTAAAGTGTGAAGGAGGCATTG
AGGACTGCGGAAATTTCCTCAAGAGGCATAAGATTTTGACCCGGAACGGGAAGCATTTTG
GGGCTAGCCCAGAGTATGTTCGGGTGAGCATGCTGGACAGGGATGAGTCCTTTAATCTCT
TTACCAAGAGATTGTCCAGTCTCCATCTCAGCCAGTCCAAAGATCATGAGAAAGAAAGTC
CCTGACCACAACACCTGTAAGAGTAGAGATATTGGGGGTTCAGCCGTTCATGCACATGAG
AGGAAAAAGGAGAAAGGAGAGAAAAAAAAAAAAAAAAAAC