Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g08960.t01
CDS Infomation

cds chromosome:12X:17:10494444:10498141:1 gene:VIT_17s0000g08960 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTCCCAGCTTGAGCAAAGGTGCTCCGGATGTAATGGGGTTGGAGGACGGTCAGTCA
TCGTCATCGATCACCCTTCAGGGTTCTGATTTTTTGGCTAATGGCCACCCAGTTCTCACG
GAAGTCCCTTCTAACATTGTGGCCATTCCATCACCCTCTAGTCCTGGAAACAAGGCCAAA
ACCATGGTGGGGTGCTTCGTGGGGTTCGAGGCCGGCGAGGCCAAGAGCCGGCACGTCGTC
CCCGTCGGGAAGCTCCAGGAAATACCGTTCATGAGCATATTCAGATTCAAGGTGTGGTGG
ACCACCCACTGGGTAGGAACCCGCGGAGGAGATGTGGAGCACGAGACCCAGATGATGATT
CTGGACAAATCGGACATGGGTCGACCCTATGTTCTCCTCCTCCCACTCATAGAAGGTCCC
TTCAGAGCCTCTCTCCAGCCGGGAGAAGACGACAACGTCGACATCTGCGTGGAAAGCGGC
TCCACCTCCGTGCGCACCTCCGCCTTCCGGAGCTGCCTCTACATGCACGTAGGAGACAAC
CCTTATGAACTAGTGAAGGACGCAATGAAAGTGGTGAGGGTCCATCTGGGGACCTTCAAG
CTTTTGGAAGAGAAGAGCCCTCCAGGTATAGTAGACAAATTTGGCTGGTGTACATGGGAT
GCATTTTACCTTAAAGTACACCCCGAAGGTGTTTGGGAAGGAGTGAAGGGCCTAGTGGAG
GGTGGGTGCCCTCCTGGCATGGTCCTAATAGACGACGGATGGCAGTCCATCGGTCACGAC
GATGAACCCATCTCCGACCAAGAAGGCATTAACAGAACCGCCGCGGGTGAGCAAATGCCA
TGTAGGCTCATAAAATTTGAGGAAAACTACAAGTTTAGGGAGTATGAGAGTCCTAGGGTA
CCCCAGGAGAAGGGTATGGGGGCATTTGTTAGGGACCTCAAGGATGAGTTTAAGAGCGTA
GAACATGTGTATGTGTGGCATGCCCTTTGTGGATATTGGGGTGGGATCAGACCCAATGTC
CCAGGCATGCCTGAGTCTAGGGTCATCGCTCCTAAGCTGTCACAGGGTTTGCAGATGACT
ATGGAGGATTTGGCCGTGGACAAGATCGTCAACAATGGTGTGGGGCTGGTGCCGCCGGAG
TCGGTGGCGGAAATGTACGACGGCCTCCACTCTCGGCTGCAATCGGTTGGCGTTGATGGA
GTCAAGGTTGATGTGATCCACTTGCTAGAGATGGTAGCAGAGGAATATGGTGGGCGAGTG
GAGCTGGCAAAAGCCTATTACAAGGCACTGACTGCATCGGTAAGGAAACATTTCAAAGGG
AATGGTGTAATTGCTAGCATGGAGCACTGCAATGACTTCATGTTCCTGGGGACTGAGACC
ATTTCGCTCGGCCGCGTTGGGGATGATTTTTGGTGCACCGACCCTTCCGGAGATCCGAAC
GGCACATTTTGGCTACAAGGGTGTCACATGGTGCATTGTGCCTACAACAGCCTGTGGATG
GGCAACTTCATACACCCTGACTGGGACATGTTTCAATCCACCCACCCATGTGCTGAGTTC
CACGCCGCTTCACGGGCTGTCTCCGGGGGACCAATATATGTCAGCGACCACGTCGGGAAA
CACAACTTCCAGCTCCTGAAAACCCTCGTCTTGCCCGATGGGTCGCTTCTGAGGTGCCAA
CACTACGCCCTTCCCTCAAGAGATTGCCTGTTCCAGGACCCATTACATGATGGGAAAACC
ATGCTCAAGATTTGGAACCTTAACAAATACACAGGAGTTTTAGGAGCATTCAACTGCCAA
GGAGGAGGGTGGTGCAGAGAAACACGAAGAAACAAGAGCGCCTCCGAGTACTCCCGCACC
GTTTCATGCTTGGCAAACCCGAGTAAAGACATAGAGTGGAGCGCCGGGAAGAGTCCCATC
TCCACCAAAGATGTGGACCTTTTTGCAGTGTACATGTTTCAGGAGAAGACGATGAAGCTG
TTGAAGCCATCAGAGAGCCTGGAGATCTCACTGGATCCATTCAAATTTGAACTCCTCACA
GTCTCTCCTGTGAAGGTGTTGCCCAGAAATAATAACAATTCAATTCAGTTTGCTCCATTC
GGACTGGTGAACATGCTCAACGGTGGCGGGGCGGTTGAGTGGGTGGAGTTGGATGAAGAT
GAAGATAGGGTGAAAATTGGAGTGAAGGGATGTGGAGAAATGAAGGCATTTGCATCTGAA
AAACCAACTACATGTAAGATCAATGGAGAGGGTGTGAAGTTCAGTTACGAGGCCCATACG
GTTGGGGTTCAAGTTCCTTGGCCTAGTTCATCACAAGTGTCAATTGTAGAGTACTTGTTC
TGA

Peptide Sequence

PEP ID

VIT_17s0000g08960.t01
PEP Infomation

pep chromosome:12X:17:10494444:10498141:1 gene:VIT_17s0000g08960 transcript:VIT_17s0000g08960.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAPSLSKGAPDVMGLEDGQSSSSITLQGSDFLANGHPVLTEVPSNIVAIPSPSSPGNKAK
TMVGCFVGFEAGEAKSRHVVPVGKLQEIPFMSIFRFKVWWTTHWVGTRGGDVEHETQMMI
LDKSDMGRPYVLLLPLIEGPFRASLQPGEDDNVDICVESGSTSVRTSAFRSCLYMHVGDN
PYELVKDAMKVVRVHLGTFKLLEEKSPPGIVDKFGWCTWDAFYLKVHPEGVWEGVKGLVE
GGCPPGMVLIDDGWQSIGHDDEPISDQEGINRTAAGEQMPCRLIKFEENYKFREYESPRV
PQEKGMGAFVRDLKDEFKSVEHVYVWHALCGYWGGIRPNVPGMPESRVIAPKLSQGLQMT
MEDLAVDKIVNNGVGLVPPESVAEMYDGLHSRLQSVGVDGVKVDVIHLLEMVAEEYGGRV
ELAKAYYKALTASVRKHFKGNGVIASMEHCNDFMFLGTETISLGRVGDDFWCTDPSGDPN
GTFWLQGCHMVHCAYNSLWMGNFIHPDWDMFQSTHPCAEFHAASRAVSGGPIYVSDHVGK
HNFQLLKTLVLPDGSLLRCQHYALPSRDCLFQDPLHDGKTMLKIWNLNKYTGVLGAFNCQ
GGGWCRETRRNKSASEYSRTVSCLANPSKDIEWSAGKSPISTKDVDLFAVYMFQEKTMKL
LKPSESLEISLDPFKFELLTVSPVKVLPRNNNNSIQFAPFGLVNMLNGGGAVEWVELDED
EDRVKIGVKGCGEMKAFASEKPTTCKINGEGVKFSYEAHTVGVQVPWPSSSQVSIVEYLF

Transcript Sequence

Transcript ID

VIT_17s0000g08960.t01
Transcript Infomation

cdna chromosome:12X:17:10494444:10498141:1 gene:VIT_17s0000g08960 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTGTCTGCCTTTTCATTTCCATGGCTCCCAGCTTGAGCAAAGGTGCTCCGGATGTAATGG
GGTTGGAGGACGGTCAGTCATCGTCATCGATCACCCTTCAGGGTTCTGATTTTTTGGCTA
ATGGCCACCCAGTTCTCACGGAAGTCCCTTCTAACATTGTGGCCATTCCATCACCCTCTA
GTCCTGGAAACAAGGCCAAAACCATGGTGGGGTGCTTCGTGGGGTTCGAGGCCGGCGAGG
CCAAGAGCCGGCACGTCGTCCCCGTCGGGAAGCTCCAGGAAATACCGTTCATGAGCATAT
TCAGATTCAAGGTGTGGTGGACCACCCACTGGGTAGGAACCCGCGGAGGAGATGTGGAGC
ACGAGACCCAGATGATGATTCTGGACAAATCGGACATGGGTCGACCCTATGTTCTCCTCC
TCCCACTCATAGAAGGTCCCTTCAGAGCCTCTCTCCAGCCGGGAGAAGACGACAACGTCG
ACATCTGCGTGGAAAGCGGCTCCACCTCCGTGCGCACCTCCGCCTTCCGGAGCTGCCTCT
ACATGCACGTAGGAGACAACCCTTATGAACTAGTGAAGGACGCAATGAAAGTGGTGAGGG
TCCATCTGGGGACCTTCAAGCTTTTGGAAGAGAAGAGCCCTCCAGGTATAGTAGACAAAT
TTGGCTGGTGTACATGGGATGCATTTTACCTTAAAGTACACCCCGAAGGTGTTTGGGAAG
GAGTGAAGGGCCTAGTGGAGGGTGGGTGCCCTCCTGGCATGGTCCTAATAGACGACGGAT
GGCAGTCCATCGGTCACGACGATGAACCCATCTCCGACCAAGAAGGCATTAACAGAACCG
CCGCGGGTGAGCAAATGCCATGTAGGCTCATAAAATTTGAGGAAAACTACAAGTTTAGGG
AGTATGAGAGTCCTAGGGTACCCCAGGAGAAGGGTATGGGGGCATTTGTTAGGGACCTCA
AGGATGAGTTTAAGAGCGTAGAACATGTGTATGTGTGGCATGCCCTTTGTGGATATTGGG
GTGGGATCAGACCCAATGTCCCAGGCATGCCTGAGTCTAGGGTCATCGCTCCTAAGCTGT
CACAGGGTTTGCAGATGACTATGGAGGATTTGGCCGTGGACAAGATCGTCAACAATGGTG
TGGGGCTGGTGCCGCCGGAGTCGGTGGCGGAAATGTACGACGGCCTCCACTCTCGGCTGC
AATCGGTTGGCGTTGATGGAGTCAAGGTTGATGTGATCCACTTGCTAGAGATGGTAGCAG
AGGAATATGGTGGGCGAGTGGAGCTGGCAAAAGCCTATTACAAGGCACTGACTGCATCGG
TAAGGAAACATTTCAAAGGGAATGGTGTAATTGCTAGCATGGAGCACTGCAATGACTTCA
TGTTCCTGGGGACTGAGACCATTTCGCTCGGCCGCGTTGGGGATGATTTTTGGTGCACCG
ACCCTTCCGGAGATCCGAACGGCACATTTTGGCTACAAGGGTGTCACATGGTGCATTGTG
CCTACAACAGCCTGTGGATGGGCAACTTCATACACCCTGACTGGGACATGTTTCAATCCA
CCCACCCATGTGCTGAGTTCCACGCCGCTTCACGGGCTGTCTCCGGGGGACCAATATATG
TCAGCGACCACGTCGGGAAACACAACTTCCAGCTCCTGAAAACCCTCGTCTTGCCCGATG
GGTCGCTTCTGAGGTGCCAACACTACGCCCTTCCCTCAAGAGATTGCCTGTTCCAGGACC
CATTACATGATGGGAAAACCATGCTCAAGATTTGGAACCTTAACAAATACACAGGAGTTT
TAGGAGCATTCAACTGCCAAGGAGGAGGGTGGTGCAGAGAAACACGAAGAAACAAGAGCG
CCTCCGAGTACTCCCGCACCGTTTCATGCTTGGCAAACCCGAGTAAAGACATAGAGTGGA
GCGCCGGGAAGAGTCCCATCTCCACCAAAGATGTGGACCTTTTTGCAGTGTACATGTTTC
AGGAGAAGACGATGAAGCTGTTGAAGCCATCAGAGAGCCTGGAGATCTCACTGGATCCAT
TCAAATTTGAACTCCTCACAGTCTCTCCTGTGAAGGTGTTGCCCAGAAATAATAACAATT
CAATTCAGTTTGCTCCATTCGGACTGGTGAACATGCTCAACGGTGGCGGGGCGGTTGAGT
GGGTGGAGTTGGATGAAGATGAAGATAGGGTGAAAATTGGAGTGAAGGGATGTGGAGAAA
TGAAGGCATTTGCATCTGAAAAACCAACTACATGTAAGATCAATGGAGAGGGTGTGAAGT
TCAGTTACGAGGCCCATACGGTTGGGGTTCAAGTTCCTTGGCCTAGTTCATCACAAGTGT
CAATTGTAGAGTACTTGTTCTGA