Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g08920.t01
CDS Infomation

cds chromosome:12X:17:10401072:10403551:-1 gene:VIT_17s0000g08920 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAGGAAACACTAAGGTACTTAGCAGGTCTTGCAGGCCCAAGTGGGTATGGCTCCAAT
TCAACTGCTGAGCAAGTTACGGAAGATTGTTCTCTTCCTTCTCAGCTGACTGCTATAATC
ACTGGGGCTACGTCGGGCATAGGGGCGGAGACGGCGAGAGTGATGGCTAAAAGAGGGGTG
AGAGTGATCATTCCGGCGAGGGACTTGAAGAAAGCAGGTGAAATGAAGGAGAGAATCCAG
AAGGAGAGCCCAAAGGCTGAGGTTATAGTGTTGGAGATTGATCTCAGCTCATTTGCCTCC
ATCAAGAGGTTCTGCTCTGAGTTCTTATCTCTAGGACTCCCCCTACACATCCTCATAAAC
AATGCAGGAAAGTTCTCTCACAAGTTGGAGTTTTCTGAAGACAAAATTGAGATGTCATTT
GCTACAAATTACTTAGGGCATTTTTTATTAACAGAGTTGTTGATAGAGAAGATGGTAGAG
ACAGCAGCACAAACAGGCATACAGGGAAGGATAATCAATGTTTCTTCGGTAATTCACAGC
TGGGTGAAGAGAGATGGCTTTCGTTTCAACCAGATGCTTAACCCAAAAAACTACAATGGC
ACTAGAGCCTATGCACAGTCCAAACTAGCCAACATATTGCATGCCAAGGAGCTGGCAAGA
CAGCTTAAGGCAAGAAATGCAAGAGTGACAATCAATGCAGTGCACCCAGGAATTGTGAAG
ACAGGGATCATCAGAGATCACAAAGGCTTTATCACAGATTCTCTGTTTTTCATAGCATCA
AAGCTACTAAAATCGACCTCTCAGGGAGCATCAACGACATGCTACGTAGGACTGAGTAGG
AAGACAGAAGGAGTGAGTGGAAAGTACTACGCAGACTGCAACGAGTGTAGCTGCTCAAGC
ATGGCAAATGATGAAAGTGAAGCACACAACCTATGGAGGCAGAGCCGTGCATTGATCCAC
AGACGGTTGCGTCTACCAGCTGCTGCTGCCTGA

Peptide Sequence

PEP ID

VIT_17s0000g08920.t01
PEP Infomation

pep chromosome:12X:17:10401072:10403551:-1 gene:VIT_17s0000g08920 transcript:VIT_17s0000g08920.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MKETLRYLAGLAGPSGYGSNSTAEQVTEDCSLPSQLTAIITGATSGIGAETARVMAKRGV
RVIIPARDLKKAGEMKERIQKESPKAEVIVLEIDLSSFASIKRFCSEFLSLGLPLHILIN
NAGKFSHKLEFSEDKIEMSFATNYLGHFLLTELLIEKMVETAAQTGIQGRIINVSSVIHS
WVKRDGFRFNQMLNPKNYNGTRAYAQSKLANILHAKELARQLKARNARVTINAVHPGIVK
TGIIRDHKGFITDSLFFIASKLLKSTSQGASTTCYVGLSRKTEGVSGKYYADCNECSCSS
MANDESEAHNLWRQSRALIHRRLRLPAAAA

Transcript Sequence

Transcript ID

VIT_17s0000g08920.t01
Transcript Infomation

cdna chromosome:12X:17:10401072:10403551:-1 gene:VIT_17s0000g08920 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CACCCTCATGAAGGAAACACTAAGGTACTTAGCAGGTCTTGCAGGCCCAAGTGGGTATGG
CTCCAATTCAACTGCTGAGCAAGTTACGGAAGATTGTTCTCTTCCTTCTCAGCTGACTGC
TATAATCACTGGGGCTACGTCGGGCATAGGGGCGGAGACGGCGAGAGTGATGGCTAAAAG
AGGGGTGAGAGTGATCATTCCGGCGAGGGACTTGAAGAAAGCAGGTGAAATGAAGGAGAG
AATCCAGAAGGAGAGCCCAAAGGCTGAGGTTATAGTGTTGGAGATTGATCTCAGCTCATT
TGCCTCCATCAAGAGGTTCTGCTCTGAGTTCTTATCTCTAGGACTCCCCCTACACATCCT
CATAAACAATGCAGGAAAGTTCTCTCACAAGTTGGAGTTTTCTGAAGACAAAATTGAGAT
GTCATTTGCTACAAATTACTTAGGGCATTTTTTATTAACAGAGTTGTTGATAGAGAAGAT
GGTAGAGACAGCAGCACAAACAGGCATACAGGGAAGGATAATCAATGTTTCTTCGGTAAT
TCACAGCTGGGTGAAGAGAGATGGCTTTCGTTTCAACCAGATGCTTAACCCAAAAAACTA
CAATGGCACTAGAGCCTATGCACAGTCCAAACTAGCCAACATATTGCATGCCAAGGAGCT
GGCAAGACAGCTTAAGGCAAGAAATGCAAGAGTGACAATCAATGCAGTGCACCCAGGAAT
TGTGAAGACAGGGATCATCAGAGATCACAAAGGCTTTATCACAGATTCTCTGTTTTTCAT
AGCATCAAAGCTACTAAAATCGACCTCTCAGGGAGCATCAACGACATGCTACGTAGGACT
GAGTAGGAAGACAGAAGGAGTGAGTGGAAAGTACTACGCAGACTGCAACGAGTGTAGCTG
CTCAAGCATGGCAAATGATGAAAGTGAAGCACACAACCTATGGAGGCAGAGCCGTGCATT
GATCCACAGACGGTTGCGTCTACCAGCTGCTGCTGCCTGAGACTTGGACTTGAGATGTGT
CCTTTTTCTTCTGTATAACTCTATACATAACAGGAACTCATCTCTCTCTCTCGCTCTCTC
TCTGTACATATTTTTTTTTACATATACGTATATAATGTGTACAAGGCATTGGCATTTAGT
GGTCAAGTACAAAGTAATAAAGGAACAGTCAGTATTGTCCTCCCAA