Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g08880.t01
CDS Infomation

cds chromosome:12X:17:10331889:10338339:-1 gene:VIT_17s0000g08880 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGTCTCAGAATCGGGGGCGAAATAGAGAAGGAAAATGGCGACGAGCTGAGTTACAGT
GACTTCGTGGAGAGGTACCTTATGAAGAATCGACCTGTTGTTCTAAGAGGGCTTATGGAT
GGATGGAGGGCTTGTAAAGATTGGGTCACTCACACTGGACAGCCTAATCTCGAATTTTTC
TCTACCCACTTTGGAAAATCCATTGTTCAGGTTGCAGATTGTGGTACCAGAGAGTTCACT
GATCAAAAGCGAATGGAAATGTCTGTTGCGGAGTTCATTGACCACTGGCTCAAGGATTCT
GCAAATTATCATGTTAATGCTACAACTAATGAGCATGGGAAGCCACTGGTATATTTGAAA
GACTGGCATTTTGTAAAGGAGTATCCAGAATATTTAGCGTACACAACTCCGCTATTCTTT
CGTGATGATTGGCTCAACCTGTATCTCGACAATTATAGTATGCATAATGAACCTGATGCT
TGTCAAGAGAAAAATGAAATTAGTTGCTCTGATTATCGGTTTGTTTACATGGGAGCAAAA
GGTACATGGACTCCCCTTCATGCCGATGTCTTCAGATCCTATAGTTGGTCGGCTAATGTT
TGTGGGAAGAAGAAATGGCTTTTTTTGCCTCCTTCACAAAGTCATCTTGTTTTTGACAGG
CATGAATATGTATTCTTGCACATCTACTCTGTATATAATATCTGTGAGGATGTCAATGAA
GCAAAATTTCCTGGGTTTAAGAAGGCTGTTTGGTTAGAATGCATTCAAGAACAAGATGAA
ATTATCTTTGTGCCCAGTGGATGGTATCATCAAGTTCACAATCTGGAAGATACAATATCA
ATAAACCACAACTGGTTCAATGCCTATAATCTTTCTTGGGTTTGGGATTTGCTTTTGAAA
GACTACAATGAGGCTAAAGAGTACATAGAGGATGTCAGGGACATATGTGATGATTTTGAA
GGTCTCTGCCAGCGCAATCTTGCAGCTAACACAGGCATGAACTTCTGTGATTTCTTCATC
TTCATAGCATGCTTCTCATTTGCCAACTTGGTCCAGCTTTATCACCTTCATAGAGTCAAT
GAAAATCCCAGTTGGTGTTTATTCCCTAAAGCTCAACATTTAGCTTTGAACCTTCTTTCC
GCTCAGAAAATTGTATTGAAGATGAAAACCGTAGATGCTCTGGCCGGAGATCATGCTTTG
TTGCTGGATTTGAGGAAAATGATGGATGATTCAAAGTTCCTTGAACTGTGCTCTGGCTTG
GACAGAACGTATAGGGGGATACACAAGGAACAACAACAAAATTATGATAAGAAGGAAACT
TTGATGGATGGCTTGGGGGATTTGGATTTTATTGTGAAGTCATGTTCTCAGATCTATGCT
CCCGAAGATCTTGTTAGTTTTATAGACTCTGCTGTTAAAAAACTTAGCAGAGCTTTCAAC
AGAGAAAGCCCTCTGCTGCCTGAATTAGATGAACTTAGGAGTCCGGATGCTCAGTAA

Peptide Sequence

PEP ID

VIT_17s0000g08880.t01
PEP Infomation

pep chromosome:12X:17:10331889:10338339:-1 gene:VIT_17s0000g08880 transcript:VIT_17s0000g08880.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGLRIGGEIEKENGDELSYSDFVERYLMKNRPVVLRGLMDGWRACKDWVTHTGQPNLEFF
STHFGKSIVQVADCGTREFTDQKRMEMSVAEFIDHWLKDSANYHVNATTNEHGKPLVYLK
DWHFVKEYPEYLAYTTPLFFRDDWLNLYLDNYSMHNEPDACQEKNEISCSDYRFVYMGAK
GTWTPLHADVFRSYSWSANVCGKKKWLFLPPSQSHLVFDRHEYVFLHIYSVYNICEDVNE
AKFPGFKKAVWLECIQEQDEIIFVPSGWYHQVHNLEDTISINHNWFNAYNLSWVWDLLLK
DYNEAKEYIEDVRDICDDFEGLCQRNLAANTGMNFCDFFIFIACFSFANLVQLYHLHRVN
ENPSWCLFPKAQHLALNLLSAQKIVLKMKTVDALAGDHALLLDLRKMMDDSKFLELCSGL
DRTYRGIHKEQQQNYDKKETLMDGLGDLDFIVKSCSQIYAPEDLVSFIDSAVKKLSRAFN
RESPLLPELDELRSPDAQ

Transcript Sequence

Transcript ID

VIT_17s0000g08880.t01
Transcript Infomation

cdna chromosome:12X:17:10331889:10338339:-1 gene:VIT_17s0000g08880 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AATGGGTCTCAGAATCGGGGGCGAAATAGAGAAGGAAAATGGCGACGAGCTGAGTTACAG
TGACTTCGTGGAGAGGTACCTTATGAAGAATCGACCTGTTGTTCTAAGAGGGCTTATGGA
TGGATGGAGGGCTTGTAAAGATTGGGTCACTCACACTGGACAGCCTAATCTCGAATTTTT
CTCTACCCACTTTGGAAAATCCATTGTTCAGGTTGCAGATTGTGGTACCAGAGAGTTCAC
TGATCAAAAGCGAATGGAAATGTCTGTTGCGGAGTTCATTGACCACTGGCTCAAGGATTC
TGCAAATTATCATGTTAATGCTACAACTAATGAGCATGGGAAGCCACTGGTATATTTGAA
AGACTGGCATTTTGTAAAGGAGTATCCAGAATATTTAGCGTACACAACTCCGCTATTCTT
TCGTGATGATTGGCTCAACCTGTATCTCGACAATTATAGTATGCATAATGAACCTGATGC
TTGTCAAGAGAAAAATGAAATTAGTTGCTCTGATTATCGGTTTGTTTACATGGGAGCAAA
AGGTACATGGACTCCCCTTCATGCCGATGTCTTCAGATCCTATAGTTGGTCGGCTAATGT
TTGTGGGAAGAAGAAATGGCTTTTTTTGCCTCCTTCACAAAGTCATCTTGTTTTTGACAG
GCATGAATATGTATTCTTGCACATCTACTCTGTATATAATATCTGTGAGGATGTCAATGA
AGCAAAATTTCCTGGGTTTAAGAAGGCTGTTTGGTTAGAATGCATTCAAGAACAAGATGA
AATTATCTTTGTGCCCAGTGGATGGTATCATCAAGTTCACAATCTGGAAGATACAATATC
AATAAACCACAACTGGTTCAATGCCTATAATCTTTCTTGGGTTTGGGATTTGCTTTTGAA
AGACTACAATGAGGCTAAAGAGTACATAGAGGATGTCAGGGACATATGTGATGATTTTGA
AGGTCTCTGCCAGCGCAATCTTGCAGCTAACACAGGCATGAACTTCTGTGATTTCTTCAT
CTTCATAGCATGCTTCTCATTTGCCAACTTGGTCCAGCTTTATCACCTTCATAGAGTCAA
TGAAAATCCCAGTTGGTGTTTATTCCCTAAAGCTCAACATTTAGCTTTGAACCTTCTTTC
CGCTCAGAAAATTGTATTGAAGATGAAAACCGTAGATGCTCTGGCCGGAGATCATGCTTT
GTTGCTGGATTTGAGGAAAATGATGGATGATTCAAAGTTCCTTGAACTGTGCTCTGGCTT
GGACAGAACGTATAGGGGGATACACAAGGAACAACAACAAAATTATGATAAGAAGGAAAC
TTTGATGGATGGCTTGGGGGATTTGGATTTTATTGTGAAGTCATGTTCTCAGATCTATGC
TCCCGAAGATCTTGTTAGTTTTATAGACTCTGCTGTTAAAAAACTTAGCAGAGCTTTCAA
CAGAGAAAGCCCTCTGCTGCCTGAATTAGATGAACTTAGGAGTCCGGATGCTCAGTAAAA
ATTAATATTTGGATACACTGTTCACTTTTTCAAGGAGGCCCCAGAAAACTGCTGGGGCAG
AAAACTCTTGGAAGATGCATGGTTGCGTTTGTTCTCAAAGGCCTTAGCAGGTTTATGAAC
TTAGAAGCTCGGCTGGTAAAATAACCTTTGTGCGACACAGGTCCAGCTTTTCGGGGAGAC
CCAACAAAACTTCTGGTCCTCAAAAACTTTTGAACGGTGTCTTTTGGTGCGTGCTTGCAA
TCCAAGATCATATGCAAGAACACATGGTGATAACTTGGCTCTTCGGGTCTGTGGAGGAGC
TGGAAAAATAAAGTTGAGATTCTAACAAGGAACTTCATTCAAGGTGGGAAGCTGTAGACG
CTCCATGTCTGCACTTATTCATTTTCTGTTTCATCAA