Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g08860.t01
CDS Infomation

cds chromosome:12X:17:10309360:10310984:-1 gene:VIT_17s0000g08860 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGTGAGCCTTCCAAGAAGCATCATAGGGGGGGTTTCCAGAGTGATGGGTCATGGAATA
GACCTCATGGGAATCGGTGGAAGGCGTAATCAGCATCTGCTGCAGCCTAATTTCCAGTTG
CCCCATCCGCAGCAGCCTGAAATGGTTCCTGAAGAGTGGGCTTTTCTGACTAGTTTTGAG
CAGCAGTATGGCTCCAGCCATCCCTTTTTCTATGTATGCCGCTTCACGGATGCTCTCAAG
ATGGCAGAAGACGATCACAAGTTCTTGTTCATGTATCTCCACTCGCCCCAACACCCATTC
ACATACTCTTTCTGCAGTGAGACCCTGTGTTCAGAGCTGGTTACACAGTTCCTTGATGCC
AACTTTGTTTCCTGGGGAGCACTCGCAGATAGAGGAGAGGGTTTGCACATGGCTGCCACA
CTGAGGCCTGGCAGCTTCCCATTCTGCGCTGTGGTAGCTCCTGCTTCGGGTGATAGCCTA
GCAGTCCTGCAACAGATTGAAGGGCCAATTTACCCAGCTGAATTGGTGGAGATTCTACAA
AGAACAATGGAGGAGCAAGGGCTGGCTTTTGGCAGCAGCTCCAGGGCTGTGGAGGAAGAA
AAGCGGAGAGCAGATCGTCGGCTGAGGGAAGAACAAGATGCAGCATATCTTGCTGCTCTT
CAGATAGACGAGGAAAAAAGTAGACCCAAAGATTTACGCTCAGAACAAGTAGTCCAGAAA
AAACCAGTACAAGCAGCAAAGCACAATCCCTCAAAGAAACAGACCGGTAAAAAGGTGAAA
GAGGCCACCACCGTCACAGAAACTCCACACAATGAAACTGCAAATGAAGAAAAGGATTCA
AGGGTTACCCAGATACTGATTCGGTTTCCAAATGGGGAAAGAAGGGAGCATAGCTTCTCA
GTCATGGATAAAGTCCAGTCGGTTTACAGGTACATTGATTCTCTGGGCTTATCCGGAGTG
GGAAACTATAGACTGATATCAAGCTTCCCAAGAAGGGTCTACAGTGTAGAAGAGATGGGA
ATGACTCTCAAAGATGCTTGCCTTCATCCTAGAGCAAGCCTCTTCCTTGAGCTTCTGTAA

Peptide Sequence

PEP ID

VIT_17s0000g08860.t01
PEP Infomation

pep chromosome:12X:17:10309360:10310984:-1 gene:VIT_17s0000g08860 transcript:VIT_17s0000g08860.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MVSLPRSIIGGVSRVMGHGIDLMGIGGRRNQHLLQPNFQLPHPQQPEMVPEEWAFLTSFE
QQYGSSHPFFYVCRFTDALKMAEDDHKFLFMYLHSPQHPFTYSFCSETLCSELVTQFLDA
NFVSWGALADRGEGLHMAATLRPGSFPFCAVVAPASGDSLAVLQQIEGPIYPAELVEILQ
RTMEEQGLAFGSSSRAVEEEKRRADRRLREEQDAAYLAALQIDEEKSRPKDLRSEQVVQK
KPVQAAKHNPSKKQTGKKVKEATTVTETPHNETANEEKDSRVTQILIRFPNGERREHSFS
VMDKVQSVYRYIDSLGLSGVGNYRLISSFPRRVYSVEEMGMTLKDACLHPRASLFLELL

Transcript Sequence

Transcript ID

VIT_17s0000g08860.t01
Transcript Infomation

cdna chromosome:12X:17:10309360:10310984:-1 gene:VIT_17s0000g08860 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CATCTCTGTTTTCCCCCTTTCGTTTTCTGTCATCTGGGGCTACAACAATGTCATCTGCAA
TAAGGGAAAGTGGGCGGGCATTGGCAGAGGCCACCTGCCATGGGATTGTTAGAAGGATGG
TGAGCCTTCCAAGAAGCATCATAGGGGGGGTTTCCAGAGTGATGGGTCATGGAATAGACC
TCATGGGAATCGGTGGAAGGCGTAATCAGCATCTGCTGCAGCCTAATTTCCAGTTGCCCC
ATCCGCAGCAGCCTGAAATGGTTCCTGAAGAGTGGGCTTTTCTGACTAGTTTTGAGCAGC
AGTATGGCTCCAGCCATCCCTTTTTCTATGTATGCCGCTTCACGGATGCTCTCAAGATGG
CAGAAGACGATCACAAGTTCTTGTTCATGTATCTCCACTCGCCCCAACACCCATTCACAT
ACTCTTTCTGCAGTGAGACCCTGTGTTCAGAGCTGGTTACACAGTTCCTTGATGCCAACT
TTGTTTCCTGGGGAGCACTCGCAGATAGAGGAGAGGGTTTGCACATGGCTGCCACACTGA
GGCCTGGCAGCTTCCCATTCTGCGCTGTGGTAGCTCCTGCTTCGGGTGATAGCCTAGCAG
TCCTGCAACAGATTGAAGGGCCAATTTACCCAGCTGAATTGGTGGAGATTCTACAAAGAA
CAATGGAGGAGCAAGGGCTGGCTTTTGGCAGCAGCTCCAGGGCTGTGGAGGAAGAAAAGC
GGAGAGCAGATCGTCGGCTGAGGGAAGAACAAGATGCAGCATATCTTGCTGCTCTTCAGA
TAGACGAGGAAAAAAGTAGACCCAAAGATTTACGCTCAGAACAAGTAGTCCAGAAAAAAC
CAGTACAAGCAGCAAAGCACAATCCCTCAAAGAAACAGACCGGTAAAAAGGTGAAAGAGG
CCACCACCGTCACAGAAACTCCACACAATGAAACTGCAAATGAAGAAAAGGATTCAAGGG
TTACCCAGATACTGATTCGGTTTCCAAATGGGGAAAGAAGGGAGCATAGCTTCTCAGTCA
TGGATAAAGTCCAGTCGGTTTACAGGTACATTGATTCTCTGGGCTTATCCGGAGTGGGAA
ACTATAGACTGATATCAAGCTTCCCAAGAAGGGTCTACAGTGTAGAAGAGATGGGAATGA
CTCTCAAAGATGCTTGCCTTCATCCTAGAGCAAGCCTCTTCCTTGAGCTTCTGTAACATA
CTTGTATGGCAATTTCCTATACGATCTTATGCCATAATATGTAAGACATGCTTTTCTTTT
CTTGTTAATGATGAATTCATGATCAAATTCTTACTCATCTGGCTCAAGTAAATAAAACCC
CACAGCCTAATTGCATTGTTTGTGTAGAAGAGATCAGAAAAGAGGGCAAA