Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g08790.t01
CDS Infomation

cds chromosome:12X:17:10194161:10198491:-1 gene:VIT_17s0000g08790 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAATTATTGTTGGCAGGTGGAACCAATGGCATTGGCAACTCACCATGTGCCGGGCTCT
TATGCAACATTTCCCACTAGATCTCATTCATGGACCAAAGGGATAAAATTGAAGCAATAT
GTAAAAACACGTCACATAGTTGGGAAACCTGATATAAGTTTCTCATTGAAGCGTAATCTT
CATTTAAGTGTAGGGACTCCTTGTGTTCGAGTTCCAAAACGAAGACCTTTGAAAATTTGT
GCCTTTAAAGGTAGTGCACAAAATGATGAATCAGGAGGGAGAGCAAGTGGATCAAAGTCC
CCCAAGAATTCCGTGAGACTTTCATATGCTCCACAAGGGAATGAAGAGACAATAACTGAA
TCTCCAAAGTCACAGAATGTTCCTCTTCCCTATTCTTCTGAAGCAAATGGGACAATTGGT
GGGTCTCTGGCCATACAGAACTTGTTCAAGAAATGGTTGACAATGTTACGCACACAATCG
CCCAGTCAAGAAGTAGATGAGATTTTAGGTGAAGGACCAGCTGTGAAAGAAATATTAGAA
ACTCAGAATGAGATTCAGAATAAGGACAGAGGTGAGATTCTAAAGGCTGTTTGGTTCTAC
TTTCTGGGTATGGACGCAGTGATAAAGATACCCTTGCTGATATTCATACCTTTGTACCTG
GCTGTTAATGTGGCTTATGGACCTGAAGTTTCGAAGGAGTTGGCTCCTTTGTGGGTTCTT
GGACCCCTGATTGTTGCTCTTTACATCAAGATGCTCCGAGGGATATGTGCACTGTATGTC
TTTAGCTTCAAGCAGACAGTTAAATTAGTCAAGAACATACCCACTTACTATCTTCTGGCC
TATACTTATATTGCTCACGGCAAGCTTAAAGAAGACATACAAGCTCGTTTTTGGCAACCT
GTTGTCGACATCAAGAACTTGGACTACAGAGAGCTATCAAGAAGAAAGTTGAAAGATTTG
CAAGAATGGTTATTGGAGAGGTACCTAGACTTTGTGGAGTCGATATGGCCCTATTATTGC
AGAACAATCAGGTTTTTGAAGAGGGCTAATCTCATCTAG

Peptide Sequence

PEP ID

VIT_17s0000g08790.t01
PEP Infomation

pep chromosome:12X:17:10194161:10198491:-1 gene:VIT_17s0000g08790 transcript:VIT_17s0000g08790.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MNYCWQVEPMALATHHVPGSYATFPTRSHSWTKGIKLKQYVKTRHIVGKPDISFSLKRNL
HLSVGTPCVRVPKRRPLKICAFKGSAQNDESGGRASGSKSPKNSVRLSYAPQGNEETITE
SPKSQNVPLPYSSEANGTIGGSLAIQNLFKKWLTMLRTQSPSQEVDEILGEGPAVKEILE
TQNEIQNKDRGEILKAVWFYFLGMDAVIKIPLLIFIPLYLAVNVAYGPEVSKELAPLWVL
GPLIVALYIKMLRGICALYVFSFKQTVKLVKNIPTYYLLAYTYIAHGKLKEDIQARFWQP
VVDIKNLDYRELSRRKLKDLQEWLLERYLDFVESIWPYYCRTIRFLKRANLI

Transcript Sequence

Transcript ID

VIT_17s0000g08790.t01
Transcript Infomation

cdna chromosome:12X:17:10194161:10198491:-1 gene:VIT_17s0000g08790 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTTATTTCTCTTCATTTCCCCAATATTTTTATCCACTCTCTTTATAGATTCTGAATTAGA
CAATAAACAGATAACAGAACCCTTCACTTCGTTTGCCTTTTTGGGTGCATTTTGTTTCAT
GTTCTCAAGATTTTGAAGAGCCCATGAATTATTGTTGGCAGGTGGAACCAATGGCATTGG
CAACTCACCATGTGCCGGGCTCTTATGCAACATTTCCCACTAGATCTCATTCATGGACCA
AAGGGATAAAATTGAAGCAATATGTAAAAACACGTCACATAGTTGGGAAACCTGATATAA
GTTTCTCATTGAAGCGTAATCTTCATTTAAGTGTAGGGACTCCTTGTGTTCGAGTTCCAA
AACGAAGACCTTTGAAAATTTGTGCCTTTAAAGGTAGTGCACAAAATGATGAATCAGGAG
GGAGAGCAAGTGGATCAAAGTCCCCCAAGAATTCCGTGAGACTTTCATATGCTCCACAAG
GGAATGAAGAGACAATAACTGAATCTCCAAAGTCACAGAATGTTCCTCTTCCCTATTCTT
CTGAAGCAAATGGGACAATTGGTGGGTCTCTGGCCATACAGAACTTGTTCAAGAAATGGT
TGACAATGTTACGCACACAATCGCCCAGTCAAGAAGTAGATGAGATTTTAGGTGAAGGAC
CAGCTGTGAAAGAAATATTAGAAACTCAGAATGAGATTCAGAATAAGGACAGAGGTGAGA
TTCTAAAGGCTGTTTGGTTCTACTTTCTGGGTATGGACGCAGTGATAAAGATACCCTTGC
TGATATTCATACCTTTGTACCTGGCTGTTAATGTGGCTTATGGACCTGAAGTTTCGAAGG
AGTTGGCTCCTTTGTGGGTTCTTGGACCCCTGATTGTTGCTCTTTACATCAAGATGCTCC
GAGGGATATGTGCACTGTATGTCTTTAGCTTCAAGCAGACAGTTAAATTAGTCAAGAACA
TACCCACTTACTATCTTCTGGCCTATACTTATATTGCTCACGGCAAGCTTAAAGAAGACA
TACAAGCTCGTTTTTGGCAACCTGTTGTCGACATCAAGAACTTGGACTACAGAGAGCTAT
CAAGAAGAAAGTTGAAAGATTTGCAAGAATGGTTATTGGAGAGGTACCTAGACTTTGTGG
AGTCGATATGGCCCTATTATTGCAGAACAATCAGGTTTTTGAAGAGGGCTAATCTCATCT
AGATTTGAGTGATGACAAGCTGAAAAAGCTGTTGGCGAGGCTAGAGGGTGGGCTGAAGTT
AGAGTTTCTTCTGCAAGTGTTTGGAACGGTAGAGATTTTTGAAACAGTGCTTGCAAAAAC
CCCATTTTGGACTTGGGGTTCTTGGTCCCTTGAGCACAAGTCAGGGATTATAACAAGCAG
TCACTCCAATCCTGTAATTTTTAAAAAAGCAATGATTTTATTCTTGCACAAGTTCCTTAT
TATTTGTTACTCTGTATCCAGTTGCTTCTTACATTTGAGGTTCCATAATGAGGTGGAAGT
GGTTTCAACTGCATCAGTTAGGCATTACCCATGGGCATTGGGTCTTCTCTGTTGTCTTGT
TTGTTTGTTA