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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g08560.t01
CDS Infomation

cds chromosome:12X:17:9846987:9851851:-1 gene:VIT_17s0000g08560 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCAGAGCACCGCTTTCACTTTCTCTCCTTCCATCTCCTCCATCTCTCTCTCCAAACCT
CTCAAGCCTGCCGCTTCTCTCTCTAGATTCAGACATATTTCCCTCTCTTCTTCTTCTTCC
AAATCTCCTGATCTCGCCTCTTCCAATGGCGTCTCTGCTTCGTCCTCCGTTCGGACGCCG
GCTGCGCTCTCCTCGTCGAGGTTCGGCGCGTTTGGTTCTGCTCCCTACCTCGTTGAGGAT
CGGAGGAGGGGTGATTTGACGGTTAGGGCGAGTTCGGTGCCGGAGAGCGCCGGGGAGAGC
GAGAAGTCGGGGAACTTGGTTCAGACGTTGCAGCTCGGGTTGTTGTTCGGTCTTTGGTAC
CTTTTCAATATCTACTTCAATATCTACAACAAGCAGGTTCTGAAGGTCTACCCATTCCCT
GTAACTGTCACCGTGGTTCAGTTTGCAGTAGGGACTGTACTTGTTATTCTTATGTGGGGA
CTTAATCTATATAAGAGACCAAAAATTAGCAGTTCGCAGCTTGTAGCAATCCTGCCACTT
GCTGTGGTGCACACGTTAGGCAACCTGTTTACTAATATGAGTCTTGGGAAAGTGTCTGTT
TCATTCACTCACACAATTAAAGCTATGGAGCCCTTTTTCTCAGTTGTCCTCTCTGCTATG
TTTCTAGGAGAGTTTCCTACAATCTGGGTGCTCTCCTCCCTTCTTCCTATTGTTGGTGGA
GTGGCGCTGGCATCAGCCACTGAGGCCTCCTTCAATTGGTCCGGGTTTTGGAGTGCAATG
GCATCAAATTTGACAAACCAATCTCGTAATGTTCTTAGCAAGAAGTTCATGATTAAGAAA
GAGGATTCATTGGATAACATTACCCTCTTCTCAATAATCACAATTATGTCCTTTATCTTG
TTAGCCCCTGTGTCTATTTTCATGGAAGGCATAAATTTTACCCCTTCATATCTGCAGTCT
GCTGGACTGAATATGGGACAGATCTACAAAAGGTCTCTCATTGCCGCACTCTGCTTCCAC
GCATATCAGCAGGTCTCTTATATGATATTGCAAAGGGTATCCCCAGTTACCCACTCTGTG
GGTAATTGTGTTAAGCGGGTGGTGGTCATTGTTACTTCTGTTCTCTTCTTCCGCACCCCT
GTTTCACCGGTCAACTCATTGGGCACTGGCGTGGCCCTTGCTGGAGTGTTCCTGTATTCA
AGAGTGAAGCGCATCAAGCCAAAGACAGCTTGA

Peptide Sequence

PEP ID

VIT_17s0000g08560.t01
PEP Infomation

pep chromosome:12X:17:9846987:9851851:-1 gene:VIT_17s0000g08560 transcript:VIT_17s0000g08560.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MQSTAFTFSPSISSISLSKPLKPAASLSRFRHISLSSSSSKSPDLASSNGVSASSSVRTP
AALSSSRFGAFGSAPYLVEDRRRGDLTVRASSVPESAGESEKSGNLVQTLQLGLLFGLWY
LFNIYFNIYNKQVLKVYPFPVTVTVVQFAVGTVLVILMWGLNLYKRPKISSSQLVAILPL
AVVHTLGNLFTNMSLGKVSVSFTHTIKAMEPFFSVVLSAMFLGEFPTIWVLSSLLPIVGG
VALASATEASFNWSGFWSAMASNLTNQSRNVLSKKFMIKKEDSLDNITLFSIITIMSFIL
LAPVSIFMEGINFTPSYLQSAGLNMGQIYKRSLIAALCFHAYQQVSYMILQRVSPVTHSV
GNCVKRVVVIVTSVLFFRTPVSPVNSLGTGVALAGVFLYSRVKRIKPKTA

Transcript Sequence

Transcript ID

VIT_17s0000g08560.t01
Transcript Infomation

cdna chromosome:12X:17:9846987:9851851:-1 gene:VIT_17s0000g08560 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATTCCAACGATTCCGCCTACCTCCCTTTTTCTCTCTTTTGCTCTCACTTTCCTTCACTTT
CTCTCTCTCGCTGCCGATCCGGATCTCCATCTCCTTACTCCTTCCCTTGCCTAAAATGCA
GAGCACCGCTTTCACTTTCTCTCCTTCCATCTCCTCCATCTCTCTCTCCAAACCTCTCAA
GCCTGCCGCTTCTCTCTCTAGATTCAGACATATTTCCCTCTCTTCTTCTTCTTCCAAATC
TCCTGATCTCGCCTCTTCCAATGGCGTCTCTGCTTCGTCCTCCGTTCGGACGCCGGCTGC
GCTCTCCTCGTCGAGGTTCGGCGCGTTTGGTTCTGCTCCCTACCTCGTTGAGGATCGGAG
GAGGGGTGATTTGACGGTTAGGGCGAGTTCGGTGCCGGAGAGCGCCGGGGAGAGCGAGAA
GTCGGGGAACTTGGTTCAGACGTTGCAGCTCGGGTTGTTGTTCGGTCTTTGGTACCTTTT
CAATATCTACTTCAATATCTACAACAAGCAGGTTCTGAAGGTCTACCCATTCCCTGTAAC
TGTCACCGTGGTTCAGTTTGCAGTAGGGACTGTACTTGTTATTCTTATGTGGGGACTTAA
TCTATATAAGAGACCAAAAATTAGCAGTTCGCAGCTTGTAGCAATCCTGCCACTTGCTGT
GGTGCACACGTTAGGCAACCTGTTTACTAATATGAGTCTTGGGAAAGTGTCTGTTTCATT
CACTCACACAATTAAAGCTATGGAGCCCTTTTTCTCAGTTGTCCTCTCTGCTATGTTTCT
AGGAGAGTTTCCTACAATCTGGGTGCTCTCCTCCCTTCTTCCTATTGTTGGTGGAGTGGC
GCTGGCATCAGCCACTGAGGCCTCCTTCAATTGGTCCGGGTTTTGGAGTGCAATGGCATC
AAATTTGACAAACCAATCTCGTAATGTTCTTAGCAAGAAGTTCATGATTAAGAAAGAGGA
TTCATTGGATAACATTACCCTCTTCTCAATAATCACAATTATGTCCTTTATCTTGTTAGC
CCCTGTGTCTATTTTCATGGAAGGCATAAATTTTACCCCTTCATATCTGCAGTCTGCTGG
ACTGAATATGGGACAGATCTACAAAAGGTCTCTCATTGCCGCACTCTGCTTCCACGCATA
TCAGCAGGTCTCTTATATGATATTGCAAAGGGTATCCCCAGTTACCCACTCTGTGGGTAA
TTGTGTTAAGCGGGTGGTGGTCATTGTTACTTCTGTTCTCTTCTTCCGCACCCCTGTTTC
ACCGGTCAACTCATTGGGCACTGGCGTGGCCCTTGCTGGAGTGTTCCTGTATTCAAGAGT
GAAGCGCATCAAGCCAAAGACAGCTTGAAGTTTGTCAGCCGAAAGTTTGTTGGTAACTTG
GGTTAGACAAAGTTAATATATTTTGTGGGATTCAAAAATTTAGTTGTAGGCCAAGCGGGA
ACTTATCTACTCCTTTGATTTTTCCTTTTTGTTTTGTGTTTTCTTTTTCTTGAGATAATT
TTATTCTTTTGCCATAATTCTGCTACGGCAAAATGTGCCAATATGAGATGATTTTTCATT
TTGCC