Gene sequences

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Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_17s0000g08080.t01
CDS Infomation	cds chromosome:12X:17:9075799:9078072:1 gene:VIT_17s0000g08080 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:F6GSS2]
Sequence	ATGTTTCAAAGTTTTAACCGGTCCGACCGCCGTATTCTCAGTTTTCCGGCGGTTCACCCC TGCGAAAGCATTTCTCCAGTGACCCTTTTAGGCTCTCTCATCGCTCTCTCCACCAGCATA CTGAATTACCAATCAAAATCCTTCCCAACCCAGAAGCGAAATGCGCGGGAAACACTTCGC CAAATCGGAATTCTGTTAATCTTTTTCGAAGAAATCCAGGACCGCCGGTCGGTTCTGCCG GACTCCGTTGTCCTCTGCTTTTCCGAGCTCCATCTCGCTTTCCAGAAAATCCAGTTCCTG TTAGAAGACTGTAGTCGAGAGGGAGCTCGGCTTTGGATTCTGATGAAGTCTCAATTCGTT GCGACTCAGTTCCGGGTCTTGATTCGGGCGTTTGCGACGGCTCTTGAGGTTTTGCCATTG AATTGCATTGATTTGACGAGTGAAGTGAAGGAGTTGGTTGAACTGGTGGCCAAGCAAGCC AGGAAGGCGAGATTTGACCTCGACGCTAACGACGAATGCGCTGCCAAGGATGTTATATGG ATTTTGAATCAATTCGAGAAGAGAATTGAGCCGGATATGAGTGTTGTGAAGAGGGTTCTT GATCACCTTGAGATTCGAAGCTGGAGTGAATGTAACAAGGAGATAAGATTCATGGAGGAA CTGAGCTTGGAATGTGATGAAAGAGAGGTTACATTATTGAAAAGTTTAATGGGGTTGATG AGCTACTGCAGAGGAGTGATGTTCGAAGAAATAGAGTCTAGCGGCACTGATCAAACGGAG GGGAGGTGCAGCGTGGAGATGCTTAGTTGCTTGAATCCTGAAGATTTTCGATGCCCCATT TCTCTCGAGCTAATGACTGATCCAGTGACGGTATCTACGGGCCAGACTTATGATCGGTCC TCAATTCAGAAATGGCTCAGAGCTGGGAACATCATCTGTCCCAAAACAGGTGAGAAGCTG ATCAACAAAGAATTGGTGCCTAATTCTGCTCTCCGAAAGCTTATCCAACAATTCTGTGAA GATCATGGCGTTTCACTAGCAAAAACAGAAACCCAGAATAGTAACGCAGCAAGGACCATT GCCGTAAACAGTCCAGCAGCCGCAGAAGCTACAAGATTTCTTTCAAAATTTCTTGCCAGA AGACTAGTATCTGGAACAGGCGAACAGAAAAACAAGGCTGCTTACGAGATTCGTTTGCTT GCAAAATCAAGTGTCTTCAATAGGTGTTGCTTGATCGAGGCCGGCACTGTCCCACCTCTC TTGAATCTCCTCTCTTCCACAGACGCACCCACGCAAGAGAACGCCATTGCAGCTTTACTG AAGCTCTCTAAGCATTCCAAAGGCAAGAAAGTGATCATGGACAGTGGAGGGCTGAAGTTG ATACTTAAAGTTCTCAAGGTGGGACCCAGGTTAGAGTCCCGGCAGATAGCAGCTGCGACT CTGTTTTATCTAGCTTCAGTGGACAAGTACCGATCATTGATCGGAGAAACACCGGAGGCA ATCCCATCTCTAGTTGAACTGATAAAAACTGGAACAACTATTGGGAAAATGCATGCAGTT GTCGCAATATTTGGACTGCTCCTATGCCGGGAGAATTGCCCCAGAGTGCTCGCAGCTGGA ACCGTTCCATTGCTGGTTCATCTTTTAGCTTCTTCAGTGAAGGAAGATCTGGCAACAGAG TCATTAGCAGCTCTGGCAAAACTTTCAGAGCATATAGACGGATCACTGGCGATCCTAAGG GCCTCGGGCTTACCTCTAATTACAAAAATTCTGCAATCTTCTCCATCCCGAACAGGAAAA GAGTACTGTGTCTCAATTTTGCTGTCTCTTTGCATCAATGGCAGCATAGAAGTGACAGTT GATTTAGCAAAAGACCCAACACTAATGACTTCCCTATACTCCCTTGTGACTGAAGGCACC TCACATGGCAGCAAGAAGGCCTGCTCGCTCCTCAAAATCATACATAAATTTCTGGAAACA GACTCTTCTGGTCTGAGGAGTTCACAAGTTCCACAGGAAAGGTTCCTTCGCGTCCGGTAG

Peptide Sequence

PEP ID	VIT_17s0000g08080.t01
PEP Infomation	pep chromosome:12X:17:9075799:9078072:1 gene:VIT_17s0000g08080 transcript:VIT_17s0000g08080.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:F6GSS2]
Sequence	MFQSFNRSDRRILSFPAVHPCESISPVTLLGSLIALSTSILNYQSKSFPTQKRNARETLR QIGILLIFFEEIQDRRSVLPDSVVLCFSELHLAFQKIQFLLEDCSREGARLWILMKSQFV ATQFRVLIRAFATALEVLPLNCIDLTSEVKELVELVAKQARKARFDLDANDECAAKDVIW ILNQFEKRIEPDMSVVKRVLDHLEIRSWSECNKEIRFMEELSLECDEREVTLLKSLMGLM SYCRGVMFEEIESSGTDQTEGRCSVEMLSCLNPEDFRCPISLELMTDPVTVSTGQTYDRS SIQKWLRAGNIICPKTGEKLINKELVPNSALRKLIQQFCEDHGVSLAKTETQNSNAARTI AVNSPAAAEATRFLSKFLARRLVSGTGEQKNKAAYEIRLLAKSSVFNRCCLIEAGTVPPL LNLLSSTDAPTQENAIAALLKLSKHSKGKKVIMDSGGLKLILKVLKVGPRLESRQIAAAT LFYLASVDKYRSLIGETPEAIPSLVELIKTGTTIGKMHAVVAIFGLLLCRENCPRVLAAG TVPLLVHLLASSVKEDLATESLAALAKLSEHIDGSLAILRASGLPLITKILQSSPSRTGK EYCVSILLSLCINGSIEVTVDLAKDPTLMTSLYSLVTEGTSHGSKKACSLLKIIHKFLET DSSGLRSSQVPQERFLRVR

Transcript Sequence

Transcript ID	VIT_17s0000g08080.t01
Transcript Infomation	cdna chromosome:12X:17:9075799:9078072:1 gene:VIT_17s0000g08080 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:F6GSS2]
Sequence	AAATACAGAGCTCCTGTGTCTTTTCCTATTTCTTCTTCAATGTTTCAAAGTTTTAACCGG TCCGACCGCCGTATTCTCAGTTTTCCGGCGGTTCACCCCTGCGAAAGCATTTCTCCAGTG ACCCTTTTAGGCTCTCTCATCGCTCTCTCCACCAGCATACTGAATTACCAATCAAAATCC TTCCCAACCCAGAAGCGAAATGCGCGGGAAACACTTCGCCAAATCGGAATTCTGTTAATC TTTTTCGAAGAAATCCAGGACCGCCGGTCGGTTCTGCCGGACTCCGTTGTCCTCTGCTTT TCCGAGCTCCATCTCGCTTTCCAGAAAATCCAGTTCCTGTTAGAAGACTGTAGTCGAGAG GGAGCTCGGCTTTGGATTCTGATGAAGTCTCAATTCGTTGCGACTCAGTTCCGGGTCTTG ATTCGGGCGTTTGCGACGGCTCTTGAGGTTTTGCCATTGAATTGCATTGATTTGACGAGT GAAGTGAAGGAGTTGGTTGAACTGGTGGCCAAGCAAGCCAGGAAGGCGAGATTTGACCTC GACGCTAACGACGAATGCGCTGCCAAGGATGTTATATGGATTTTGAATCAATTCGAGAAG AGAATTGAGCCGGATATGAGTGTTGTGAAGAGGGTTCTTGATCACCTTGAGATTCGAAGC TGGAGTGAATGTAACAAGGAGATAAGATTCATGGAGGAACTGAGCTTGGAATGTGATGAA AGAGAGGTTACATTATTGAAAAGTTTAATGGGGTTGATGAGCTACTGCAGAGGAGTGATG TTCGAAGAAATAGAGTCTAGCGGCACTGATCAAACGGAGGGGAGGTGCAGCGTGGAGATG CTTAGTTGCTTGAATCCTGAAGATTTTCGATGCCCCATTTCTCTCGAGCTAATGACTGAT CCAGTGACGGTATCTACGGGCCAGACTTATGATCGGTCCTCAATTCAGAAATGGCTCAGA GCTGGGAACATCATCTGTCCCAAAACAGGTGAGAAGCTGATCAACAAAGAATTGGTGCCT AATTCTGCTCTCCGAAAGCTTATCCAACAATTCTGTGAAGATCATGGCGTTTCACTAGCA AAAACAGAAACCCAGAATAGTAACGCAGCAAGGACCATTGCCGTAAACAGTCCAGCAGCC GCAGAAGCTACAAGATTTCTTTCAAAATTTCTTGCCAGAAGACTAGTATCTGGAACAGGC GAACAGAAAAACAAGGCTGCTTACGAGATTCGTTTGCTTGCAAAATCAAGTGTCTTCAAT AGGTGTTGCTTGATCGAGGCCGGCACTGTCCCACCTCTCTTGAATCTCCTCTCTTCCACA GACGCACCCACGCAAGAGAACGCCATTGCAGCTTTACTGAAGCTCTCTAAGCATTCCAAA GGCAAGAAAGTGATCATGGACAGTGGAGGGCTGAAGTTGATACTTAAAGTTCTCAAGGTG GGACCCAGGTTAGAGTCCCGGCAGATAGCAGCTGCGACTCTGTTTTATCTAGCTTCAGTG GACAAGTACCGATCATTGATCGGAGAAACACCGGAGGCAATCCCATCTCTAGTTGAACTG ATAAAAACTGGAACAACTATTGGGAAAATGCATGCAGTTGTCGCAATATTTGGACTGCTC CTATGCCGGGAGAATTGCCCCAGAGTGCTCGCAGCTGGAACCGTTCCATTGCTGGTTCAT CTTTTAGCTTCTTCAGTGAAGGAAGATCTGGCAACAGAGTCATTAGCAGCTCTGGCAAAA CTTTCAGAGCATATAGACGGATCACTGGCGATCCTAAGGGCCTCGGGCTTACCTCTAATT ACAAAAATTCTGCAATCTTCTCCATCCCGAACAGGAAAAGAGTACTGTGTCTCAATTTTG CTGTCTCTTTGCATCAATGGCAGCATAGAAGTGACAGTTGATTTAGCAAAAGACCCAACA CTAATGACTTCCCTATACTCCCTTGTGACTGAAGGCACCTCACATGGCAGCAAGAAGGCC TGCTCGCTCCTCAAAATCATACATAAATTTCTGGAAACAGACTCTTCTGGTCTGAGGAGT TCACAAGTTCCACAGGAAAGGTTCCTTCGCGTCCGGTAGCCACACTGCCACACATTATTT TCTAACATCTCCTCATGTAAATAGATACATGCTGGTGTGCTCAAACTCGTCTTTCCAATT TATTTTCGCAGATTGAAGTAAACTGTATTAGCTCAGTTTTTTGAAGAGCTATAGGTGCTT ATCCCCTGTTTTTGTGGCAATGAAACAAAGCTTGGTGATTTTTTTCCTTCAAAA