Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g08070.t01
CDS Infomation

cds chromosome:12X:17:9063859:9068388:1 gene:VIT_17s0000g08070 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGGCTAGGAGGATCTCCTCGTTGCTCTCTCGTTCTCTCTCTGTCTCTTCTGCTTTT
TCTCTTTCTCTAGGCAAAAATTTCAACAGAGGGAAAAGCATCCATCGCTTTAGCACTGCA
GCAGCAGCAGCAGTTGAAGAACTCATCACTCCAACTGTTCAGATAAATTACACTCAACTT
CTAATTAATGGGCAATTTGTAGATGCAGCATCGGGAAAAACATTCCCCACCTTTGACCCT
CGCACGGGAGAAGTGATTGCTAATGTTGCAGAAGGTGATGCAGAAGATATCAATCGGGCA
GTGTCCGCTGCTCGAAAGGCGTTTGATGAAGGACCATGGCCAAGGATGAGCCCCTATGAA
AGGTCGCGGATATTGTTGCGGTTTGCTGATTTAGCCGAGAAACACAATGATGAGCTTGCA
GCTCTAGAGACATGGAATAATGGGAAGCCATATGAACAGGCTGCCAAAGCTGAATTGCCA
CTGTTTGTTCGTCTATTTCGCTATTATGCAGGTTGGGCAGATAAAATCCATGGTTTAACA
GTTCAGGCTGATGGCCCACACCATGTTCAGATATTGCACGAGCCAATTGGTGTTGCGGGA
CAGATTATTCCCTGGAATTTTCCTCTTATGATGTTTGCTTGGAAAGTTGGACCTGCACTA
GCATGTGGTAATACCATTGTCCTAAAGACAGCAGAGCAAACACCTTTGACTGCTCTCTTT
GCGGCAAAGCTATTTCATGAGGCTGGTCTTCCTCCCGGTATTTTAAATATCGTGTCTGGC
TATGGTCCGACTGCTGGTGCTGCTCTTGCTAGTCATATGGATGTGGACAAGATTGCTTTC
ACAGGGTCGACTGATACTGGTAAGATTGTACAAGAATTGGCTTCAAAAAGCAATCTTAAA
CCAGTAACGCTAGAGCTTGGAGGTAAATCACCTTTCATTGTATGTGAGGATGCTGACATT
GATCAAGCTGTAGAGCTAGCACACTTTGCTCTGTTCTTTAATCAGGGACAATGCTGCTGT
GCTGGGTCTCGGACATTTGTTCATGAGAGTGTATACGATGAGTTTATTGAGAAAGCAAAG
GCACGTGCTCTGAGTCGCACGGTCGGTGATCCTTTCAAGAAGGGCATCGAGCAAGGTCCT
CAGATCGACCCAGAGCAATTTGCGAAGGTTCTCAGATACATAAGATCTGGTATTGAAAGC
AATGCCACCCTTGAATGTGGAGGTGGAAGAATTGGCTCAAAAGGCTACTTTGTCCAACCC
ACTGTTTTCTCAAATGTTCAGGATGATATGCTGATTGCAAAGGATGAGATCTTTGGCCCT
GTACAATCCATCTTGAAATACAAGGACCTTGATGAAGTGATTAGGAGGGCAAATTCAACG
CGATACGGTCTAGCAGCAGGGGTGTTCACAAAGAACATCAACACTGCCAACACCTTGACA
AGAGCATTGAGAGTGGGGACTGTATGGGTGAATTGCTTCGATGTGTTTGATGCTGCAATC
CCATTTGGTGGGTACAAGATGAGTGGAGTAGGAAGGGAAAAGGGAATCTACAGCCTCAAT
AACTACTTGCAGGTGAAGGCTGTGATTACTCCACTGAAGAATCCAGCTTGGTTGTGA

Peptide Sequence

PEP ID

VIT_17s0000g08070.t01
PEP Infomation

pep chromosome:12X:17:9063859:9068388:1 gene:VIT_17s0000g08070 transcript:VIT_17s0000g08070.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAARRISSLLSRSLSVSSAFSLSLGKNFNRGKSIHRFSTAAAAAVEELITPTVQINYTQL
LINGQFVDAASGKTFPTFDPRTGEVIANVAEGDAEDINRAVSAARKAFDEGPWPRMSPYE
RSRILLRFADLAEKHNDELAALETWNNGKPYEQAAKAELPLFVRLFRYYAGWADKIHGLT
VQADGPHHVQILHEPIGVAGQIIPWNFPLMMFAWKVGPALACGNTIVLKTAEQTPLTALF
AAKLFHEAGLPPGILNIVSGYGPTAGAALASHMDVDKIAFTGSTDTGKIVQELASKSNLK
PVTLELGGKSPFIVCEDADIDQAVELAHFALFFNQGQCCCAGSRTFVHESVYDEFIEKAK
ARALSRTVGDPFKKGIEQGPQIDPEQFAKVLRYIRSGIESNATLECGGGRIGSKGYFVQP
TVFSNVQDDMLIAKDEIFGPVQSILKYKDLDEVIRRANSTRYGLAAGVFTKNINTANTLT
RALRVGTVWVNCFDVFDAAIPFGGYKMSGVGREKGIYSLNNYLQVKAVITPLKNPAWL

Transcript Sequence

Transcript ID

VIT_17s0000g08070.t01
Transcript Infomation

cdna chromosome:12X:17:9063859:9068388:1 gene:VIT_17s0000g08070 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TGATGTAGAGAGCGTTGTTTGCTTGCTACTTTGTCTAGTGGTGGTGGTGGGTGGTTTTAA
AAAATCTTTGGTGGAGAAGCTACTGTTTATCATAAAGTTTTGGAGCTCATCTCTGCATCT
AGCCATGGCGGCTAGGAGGATCTCCTCGTTGCTCTCTCGTTCTCTCTCTGTCTCTTCTGC
TTTTTCTCTTTCTCTAGGCAAAAATTTCAACAGAGGGAAAAGCATCCATCGCTTTAGCAC
TGCAGCAGCAGCAGCAGTTGAAGAACTCATCACTCCAACTGTTCAGATAAATTACACTCA
ACTTCTAATTAATGGGCAATTTGTAGATGCAGCATCGGGAAAAACATTCCCCACCTTTGA
CCCTCGCACGGGAGAAGTGATTGCTAATGTTGCAGAAGGTGATGCAGAAGATATCAATCG
GGCAGTGTCCGCTGCTCGAAAGGCGTTTGATGAAGGACCATGGCCAAGGATGAGCCCCTA
TGAAAGGTCGCGGATATTGTTGCGGTTTGCTGATTTAGCCGAGAAACACAATGATGAGCT
TGCAGCTCTAGAGACATGGAATAATGGGAAGCCATATGAACAGGCTGCCAAAGCTGAATT
GCCACTGTTTGTTCGTCTATTTCGCTATTATGCAGGTTGGGCAGATAAAATCCATGGTTT
AACAGTTCAGGCTGATGGCCCACACCATGTTCAGATATTGCACGAGCCAATTGGTGTTGC
GGGACAGATTATTCCCTGGAATTTTCCTCTTATGATGTTTGCTTGGAAAGTTGGACCTGC
ACTAGCATGTGGTAATACCATTGTCCTAAAGACAGCAGAGCAAACACCTTTGACTGCTCT
CTTTGCGGCAAAGCTATTTCATGAGGCTGGTCTTCCTCCCGGTATTTTAAATATCGTGTC
TGGCTATGGTCCGACTGCTGGTGCTGCTCTTGCTAGTCATATGGATGTGGACAAGATTGC
TTTCACAGGGTCGACTGATACTGGTAAGATTGTACAAGAATTGGCTTCAAAAAGCAATCT
TAAACCAGTAACGCTAGAGCTTGGAGGTAAATCACCTTTCATTGTATGTGAGGATGCTGA
CATTGATCAAGCTGTAGAGCTAGCACACTTTGCTCTGTTCTTTAATCAGGGACAATGCTG
CTGTGCTGGGTCTCGGACATTTGTTCATGAGAGTGTATACGATGAGTTTATTGAGAAAGC
AAAGGCACGTGCTCTGAGTCGCACGGTCGGTGATCCTTTCAAGAAGGGCATCGAGCAAGG
TCCTCAGATCGACCCAGAGCAATTTGCGAAGGTTCTCAGATACATAAGATCTGGTATTGA
AAGCAATGCCACCCTTGAATGTGGAGGTGGAAGAATTGGCTCAAAAGGCTACTTTGTCCA
ACCCACTGTTTTCTCAAATGTTCAGGATGATATGCTGATTGCAAAGGATGAGATCTTTGG
CCCTGTACAATCCATCTTGAAATACAAGGACCTTGATGAAGTGATTAGGAGGGCAAATTC
AACGCGATACGGTCTAGCAGCAGGGGTGTTCACAAAGAACATCAACACTGCCAACACCTT
GACAAGAGCATTGAGAGTGGGGACTGTATGGGTGAATTGCTTCGATGTGTTTGATGCTGC
AATCCCATTTGGTGGGTACAAGATGAGTGGAGTAGGAAGGGAAAAGGGAATCTACAGCCT
CAATAACTACTTGCAGGTGAAGGCTGTGATTACTCCACTGAAGAATCCAGCTTGGTTGTG
AGTCTGTCCCAGCGTCGCCCATTACAAATAAAGATGATCATAGATGGCATCAATCTGTAA
TTGCGCCCATATCATCAGACCCCCTTTGCTTGTTTTCACTTTGACTGCCTCCAGAGAATA
TAGCACCAACTCTATCAAACTTCAGCTCTGCCTCCTGCCTTGTGTTATCAAGTGGTTTGC
ATATGATATATTCTTGATGAGTGAA