Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g07850.t01
CDS Infomation

cds chromosome:12X:17:8799713:8806242:-1 gene:VIT_17s0000g07850 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCAGGTGGAGGAGGCGGTGGAAAGGCAGAGGAGCCACAGCCACACCCACCAAAGGAG
CAGCTACCGGGCGTTCATTTCTGCATTACCAGTCCTCCATCATGGCCCGAGGCTATCATT
CTCGGTTTCCAACACTATATAGTGATGCTCGGTACAACAGTTCTCATCCCCACTGCTCTT
GTTCCCCAGATGGGAGGAGGAAATGAAGAGAAAGCAAAGGTGATTCAGACACTGCTCTTT
GTTGCTGGTTTGAACACATTCACCCAAACACTATTTGGAAGTAGATTACCTGCTGTGATT
GGAGGCTCTTATACATTTGTTGCAGCTACAATTTCAATTATTCTGGCTGGTCGATTCAGT
GATGATGGGGATCCTATACAGAAATTCAAGAGGACTATGCGGGCAATCCAAGGTGCCATG
ATTGTTGCTTCAACTCTTCAGATTGTCCTAGGTTTCAGTGGCCTTTGGCGTAATGTTACG
AGGTTTCTAAGTCCACTTTCAGCTGTTCCTTTGGTATCTCTAGCAGGGTTTGGTCTCTAT
GAGTTCGGTTTTCCTGGTGTTGCCAAATGTGTGGAGATTGGACTGCCACAGCTTATCATT
TTAATACTTGTCTCACAGTACATGCCACATGTGATACACTCTGGAAAAAATATATTTGAC
CGTTTTGCTGTTATATTCACCGTGGTGATTGTCTGGATTTATGCTCACCTACTCACGGTG
GGTGGGGCTTACAATGGTGCTGCGCCAAAGACACAAGCAAGCTGTCGTACTGATCGTGCT
GGACTTATAGATGCTGCTCCATGGATAAGGATTCCGTATCCCTTTCAATGGGGAGCACCT
ACATTTGATGCTGGAGAAGCTTTTGCCATGATGGTTACTTCATTTGTTGCTCTTGTAGAG
TCCACAGGTGCTTTTATTGCGGTGTCGAGGTTCGCAAGTGCAACTCATTTGCCATCTTCC
ATTCTCAGCCGGGGTGTTGGTTGGCAGGGAATTGGCATTTTGTTATCTGGGTTATTTGGA
ACTGTGAATGGATCATCAGTATCTGTAGAAAATGCTGGTCTTTTAGCATTAACACGTGTT
GGCAGCAGAAGGGTTGTTCAAATATCAGCTGGGTTCATGATTTTCTTTTCCATTCTTGGT
AAATTTGGAGCAGTCTTCGCTTCAATTCCAGCACCAATTGTTGCTGCTTTGTATTGTCTT
TTCTTTGCCTATGTGGGTTCAGGAGGTCTGAGCTTCCTTCAGTTCTGCAACCTGAACAGC
TTCCGAACAAAGTTCATATTAGGATTCTCAATTTTTATGGGCTTTTCTGTGCCACAGTAC
TTCAATGAGTTCACAGCTATTAGAGGTTATGGTCCAGTTCATACTAGTGGGAGATGGTTC
AATGATATGATAAATGTCCCCTTCTCATCGGAAGCATTTGTTGCGGGCTGCCTGGCATTT
TTACTGGACATCACACTCCATCGGAAAGATGGCTCAGTTAGGAAAGACAGGGGTAAGCAT
TGGTGGGACAAGTTCCGATCCTTCAAGACTGATACAAGAAGTGAGGAATTTTATTCTTTG
CCTTTCAATCTCAACAAATATTTCCCATCTGTGTAA

Peptide Sequence

PEP ID

VIT_17s0000g07850.t01
PEP Infomation

pep chromosome:12X:17:8799713:8806242:-1 gene:VIT_17s0000g07850 transcript:VIT_17s0000g07850.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAGGGGGGKAEEPQPHPPKEQLPGVHFCITSPPSWPEAIILGFQHYIVMLGTTVLIPTAL
VPQMGGGNEEKAKVIQTLLFVAGLNTFTQTLFGSRLPAVIGGSYTFVAATISIILAGRFS
DDGDPIQKFKRTMRAIQGAMIVASTLQIVLGFSGLWRNVTRFLSPLSAVPLVSLAGFGLY
EFGFPGVAKCVEIGLPQLIILILVSQYMPHVIHSGKNIFDRFAVIFTVVIVWIYAHLLTV
GGAYNGAAPKTQASCRTDRAGLIDAAPWIRIPYPFQWGAPTFDAGEAFAMMVTSFVALVE
STGAFIAVSRFASATHLPSSILSRGVGWQGIGILLSGLFGTVNGSSVSVENAGLLALTRV
GSRRVVQISAGFMIFFSILGKFGAVFASIPAPIVAALYCLFFAYVGSGGLSFLQFCNLNS
FRTKFILGFSIFMGFSVPQYFNEFTAIRGYGPVHTSGRWFNDMINVPFSSEAFVAGCLAF
LLDITLHRKDGSVRKDRGKHWWDKFRSFKTDTRSEEFYSLPFNLNKYFPSV

Transcript Sequence

Transcript ID

VIT_17s0000g07850.t01
Transcript Infomation

cdna chromosome:12X:17:8799713:8806242:-1 gene:VIT_17s0000g07850 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTTCTGGGTCTTCATATTTCTGAGTGTTTTCTCTTTCTCTCTTTCTCCCTTTCTTCCACT
AAGCTTAGTGGGTTTTGGGTTTCTGTAAGATTTGGGATCTGGGTTGTGTTCAGATTTGGG
GTTTTGCAGTGCTGATACAGATTCACTGATTTTGTTATTTTTAGAGAGAGAGAGTGTGTT
TTAGAGAGAAAAAGAGCATGGCAGGTGGAGGAGGCGGTGGAAAGGCAGAGGAGCCACAGC
CACACCCACCAAAGGAGCAGCTACCGGGCGTTCATTTCTGCATTACCAGTCCTCCATCAT
GGCCCGAGGCTATCATTCTCGGTTTCCAACACTATATAGTGATGCTCGGTACAACAGTTC
TCATCCCCACTGCTCTTGTTCCCCAGATGGGAGGAGGAAATGAAGAGAAAGCAAAGGTGA
TTCAGACACTGCTCTTTGTTGCTGGTTTGAACACATTCACCCAAACACTATTTGGAAGTA
GATTACCTGCTGTGATTGGAGGCTCTTATACATTTGTTGCAGCTACAATTTCAATTATTC
TGGCTGGTCGATTCAGTGATGATGGGGATCCTATACAGAAATTCAAGAGGACTATGCGGG
CAATCCAAGGTGCCATGATTGTTGCTTCAACTCTTCAGATTGTCCTAGGTTTCAGTGGCC
TTTGGCGTAATGTTACGAGGTTTCTAAGTCCACTTTCAGCTGTTCCTTTGGTATCTCTAG
CAGGGTTTGGTCTCTATGAGTTCGGTTTTCCTGGTGTTGCCAAATGTGTGGAGATTGGAC
TGCCACAGCTTATCATTTTAATACTTGTCTCACAGTACATGCCACATGTGATACACTCTG
GAAAAAATATATTTGACCGTTTTGCTGTTATATTCACCGTGGTGATTGTCTGGATTTATG
CTCACCTACTCACGGTGGGTGGGGCTTACAATGGTGCTGCGCCAAAGACACAAGCAAGCT
GTCGTACTGATCGTGCTGGACTTATAGATGCTGCTCCATGGATAAGGATTCCGTATCCCT
TTCAATGGGGAGCACCTACATTTGATGCTGGAGAAGCTTTTGCCATGATGGTTACTTCAT
TTGTTGCTCTTGTAGAGTCCACAGGTGCTTTTATTGCGGTGTCGAGGTTCGCAAGTGCAA
CTCATTTGCCATCTTCCATTCTCAGCCGGGGTGTTGGTTGGCAGGGAATTGGCATTTTGT
TATCTGGGTTATTTGGAACTGTGAATGGATCATCAGTATCTGTAGAAAATGCTGGTCTTT
TAGCATTAACACGTGTTGGCAGCAGAAGGGTTGTTCAAATATCAGCTGGGTTCATGATTT
TCTTTTCCATTCTTGGTAAATTTGGAGCAGTCTTCGCTTCAATTCCAGCACCAATTGTTG
CTGCTTTGTATTGTCTTTTCTTTGCCTATGTGGGTTCAGGAGGTCTGAGCTTCCTTCAGT
TCTGCAACCTGAACAGCTTCCGAACAAAGTTCATATTAGGATTCTCAATTTTTATGGGCT
TTTCTGTGCCACAGTACTTCAATGAGTTCACAGCTATTAGAGGTTATGGTCCAGTTCATA
CTAGTGGGAGATGGTTCAATGATATGATAAATGTCCCCTTCTCATCGGAAGCATTTGTTG
CGGGCTGCCTGGCATTTTTACTGGACATCACACTCCATCGGAAAGATGGCTCAGTTAGGA
AAGACAGGGGTAAGCATTGGTGGGACAAGTTCCGATCCTTCAAGACTGATACAAGAAGTG
AGGAATTTTATTCTTTGCCTTTCAATCTCAACAAATATTTCCCATCTGTGTAATCTGCTC
GTCACTGAGTTCTAATGCGGTCTTACCAAGTCTTGCACACTCAATAGCTCTCTTCGGGCT
CATGCTATAATATTAATATCATCGTTCTTTGTTTTACTTGTGAATCCTGTTGCATGCTAT
AGCACAGTATAAATCAGTCACCTCCTTTACAGGATGCCTTAGAACATTTATTTATTAATT
TTTCGCTGTAAATCCAATGGGTGAAATGGACTTGACCTAGCAATGAAGCAA