Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g07490.t01
CDS Infomation

cds chromosome:12X:17:8423656:8438725:-1 gene:VIT_17s0000g07490 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAAGATTCTGAGAAATTGACGGCGTTGAAGAAGGCTTACGCCGAGACAATTCTGAAT
ACGGCGAAGGAGGCGGCGGCGCGAATAATGGTGTCGGAGCGGAAGGCTCTGAGCTCTCAG
CAGGATCTATTTATGGCGAAAGAAGAAGCACTTCGTATGCTTGTTCGGCTCAAGCAGATG
ATGGATTCTAAGATCGGTGAAGCAAAAATGATATCCTTGAGTCAACAGAAGAAAATTGAA
GAGCTTGAAGCACAGCTTGAGGAAGCAGAAGATATAGTGCGAGAACTTAGGGAGGAGTTG
AGAGAAGTGCAAAATGCATTGGAGAAGATGACAAAGAAACAATTGCAGGCTTTGGATGAA
AAAAGTTTCAAGGGCAATGCTGGTACTGAGGTAGAGGCACCACAGGAGTACAAACTCAGT
GCATCTGCTTCCTTGATACTTCCTCGTACAGGTTCACGGCCTGAACCTGTCACAACATCT
GACCTAAAAAATTCAACTTTTAATAAGAGAAATGAGGGCAATAAATGTTATGGGGCAAAT
GACTCATATATGGAGAATTGCTTTGTTGCTAACCGGGATTTTGCCTCCATAGTCACAAGG
AGCAAAGAGCCTGAGCTGTACAGAAATGGATGCACCCAGAGAATACGTGCTTTTGAAAGC
AGCCTGTTGGAAGGGAAATTATCTCTTTCTGGACAAGTAGATGGTGCAATGAATGAAACA
ACTATTGGAGAAGAAGAAGAGGGTGGTGAAGGGATCTATATGACATCCATTCCCAAGGAT
GACAATGTGTGTAGAATGGAGAGGAACCCAGATGAAGCCAAAGAAATAAGGCAAGAAGAT
GGAAACTTGTACCCTGTTCAAGCTATTAAGTCCTTTCGCAGAAAAAGAAAAAGAGCTGTT
AGATATAGCAATAAAGCTCCCTCTTCTACATGTCTTCTTGATCAAGTTACAGAAACACAT
CAAGCATCTGATCTTTCTTTCTCCAAAACTTACCATTATGCAATCACCAATGATCTTCAA
TCTGGTGAAACCCCTTCCAATAGAACTGCAAATGAATCTCAGAAGGATCCAGAATCCCCT
GCAGCCCTAAAATTACCCTCAGATGCAACTGAGACAAGTAAACAGTCAGAATGCATAGAA
GTTGCTGAAAATGATGCTGAATTTGTGAAAGCATGTAGTGCTCGAAGTACACTAAACAAG
AATAAGGTGTTGATAGATGACACAGTTTTGTCGAGACAAGAAAGTGGGTCTCTGGAGATT
TCAGAAGCTCACAATTGTACAATGGATCTTGAGACAGCTAATGTGTCAGTAGTGAACTCA
GATCTGAAGGTATCTGTTAAAACTGATGTGGTTCTTAGTCAACCTGTGCTCAAGTACACA
TTTCGAAGGAAGAGAAAGAAGGAAACTTTGGGCCATGCTGATGGGAATATCTCTCTTGAA
AAGAACACTTTGAAGAGAAGCACAGATGAGACACAAAATGGTCCTTCCGAGCCACAGCAG
GCTAGCTTGATACCTGAATCATCTCGAGACAGTCGGCAAGTAGCACAGGTTGCTCGTCAG
CTAATATCTTTGTCAGAGAAAAAATGGTGGCAGTAG

Peptide Sequence

PEP ID

VIT_17s0000g07490.t01
PEP Infomation

pep chromosome:12X:17:8423656:8438725:-1 gene:VIT_17s0000g07490 transcript:VIT_17s0000g07490.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEDSEKLTALKKAYAETILNTAKEAAARIMVSERKALSSQQDLFMAKEEALRMLVRLKQM
MDSKIGEAKMISLSQQKKIEELEAQLEEAEDIVRELREELREVQNALEKMTKKQLQALDE
KSFKGNAGTEVEAPQEYKLSASASLILPRTGSRPEPVTTSDLKNSTFNKRNEGNKCYGAN
DSYMENCFVANRDFASIVTRSKEPELYRNGCTQRIRAFESSLLEGKLSLSGQVDGAMNET
TIGEEEEGGEGIYMTSIPKDDNVCRMERNPDEAKEIRQEDGNLYPVQAIKSFRRKRKRAV
RYSNKAPSSTCLLDQVTETHQASDLSFSKTYHYAITNDLQSGETPSNRTANESQKDPESP
AALKLPSDATETSKQSECIEVAENDAEFVKACSARSTLNKNKVLIDDTVLSRQESGSLEI
SEAHNCTMDLETANVSVVNSDLKVSVKTDVVLSQPVLKYTFRRKRKKETLGHADGNISLE
KNTLKRSTDETQNGPSEPQQASLIPESSRDSRQVAQVARQLISLSEKKWWQ

Transcript Sequence

Transcript ID

VIT_17s0000g07490.t01
Transcript Infomation

cdna chromosome:12X:17:8423656:8438725:-1 gene:VIT_17s0000g07490 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TCTTTCCACTGAGGCCCAACAGTGTGATGAAGTAGAACGGAAATGGAAGATTCTGAGAAA
TTGACGGCGTTGAAGAAGGCTTACGCCGAGACAATTCTGAATACGGCGAAGGAGGCGGCG
GCGCGAATAATGGTGTCGGAGCGGAAGGCTCTGAGCTCTCAGCAGGATCTATTTATGGCG
AAAGAAGAAGCACTTCGTATGCTTGTTCGGCTCAAGCAGATGATGGATTCTAAGATCGGT
GAAGCAAAAATGATATCCTTGAGTCAACAGAAGAAAATTGAAGAGCTTGAAGCACAGCTT
GAGGAAGCAGAAGATATAGTGCGAGAACTTAGGGAGGAGTTGAGAGAAGTGCAAAATGCA
TTGGAGAAGATGACAAAGAAACAATTGCAGGCTTTGGATGAAAAAAGTTTCAAGGGCAAT
GCTGGTACTGAGGTAGAGGCACCACAGGAGTACAAACTCAGTGCATCTGCTTCCTTGATA
CTTCCTCGTACAGGTTCACGGCCTGAACCTGTCACAACATCTGACCTAAAAAATTCAACT
TTTAATAAGAGAAATGAGGGCAATAAATGTTATGGGGCAAATGACTCATATATGGAGAAT
TGCTTTGTTGCTAACCGGGATTTTGCCTCCATAGTCACAAGGAGCAAAGAGCCTGAGCTG
TACAGAAATGGATGCACCCAGAGAATACGTGCTTTTGAAAGCAGCCTGTTGGAAGGGAAA
TTATCTCTTTCTGGACAAGTAGATGGTGCAATGAATGAAACAACTATTGGAGAAGAAGAA
GAGGGTGGTGAAGGGATCTATATGACATCCATTCCCAAGGATGACAATGTGTGTAGAATG
GAGAGGAACCCAGATGAAGCCAAAGAAATAAGGCAAGAAGATGGAAACTTGTACCCTGTT
CAAGCTATTAAGTCCTTTCGCAGAAAAAGAAAAAGAGCTGTTAGATATAGCAATAAAGCT
CCCTCTTCTACATGTCTTCTTGATCAAGTTACAGAAACACATCAAGCATCTGATCTTTCT
TTCTCCAAAACTTACCATTATGCAATCACCAATGATCTTCAATCTGGTGAAACCCCTTCC
AATAGAACTGCAAATGAATCTCAGAAGGATCCAGAATCCCCTGCAGCCCTAAAATTACCC
TCAGATGCAACTGAGACAAGTAAACAGTCAGAATGCATAGAAGTTGCTGAAAATGATGCT
GAATTTGTGAAAGCATGTAGTGCTCGAAGTACACTAAACAAGAATAAGGTGTTGATAGAT
GACACAGTTTTGTCGAGACAAGAAAGTGGGTCTCTGGAGATTTCAGAAGCTCACAATTGT
ACAATGGATCTTGAGACAGCTAATGTGTCAGTAGTGAACTCAGATCTGAAGGTATCTGTT
AAAACTGATGTGGTTCTTAGTCAACCTGTGCTCAAGTACACATTTCGAAGGAAGAGAAAG
AAGGAAACTTTGGGCCATGCTGATGGGAATATCTCTCTTGAAAAGAACACTTTGAAGAGA
AGCACAGATGAGACACAAAATGGTCCTTCCGAGCCACAGCAGGCTAGCTTGATACCTGAA
TCATCTCGAGACAGTCGGCAAGTAGCACAGGTTGCTCGTCAGCTAATATCTTTGTCAGAG
AAAAAATGGTGGCAGTAGATTTGCCTTCAAGTGGCAACGGTGTCCAACATGCAGGATGCC
AATGGGATGGTCCCTCCCTCTGCAATGTAGTTCTGAAGGTGATTTAGTCAAGAAAACCGA
TGAATGACTGTCTTATCAAGAGACAAAAGTAGATCCCCAAGTCGATGATATTTAGGCATG
ATATTCGGTAAGTTATTACCAGAGCTGTATTTCTTTAACTTCTCTCTGTCTCTCTCTCTC
TCAGACATGAATTGTGAATTGTTTATGGCTGTGTTGGCCAAATCTTGATCAGTTTTATTT
AAGTA