Gene sequences

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Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_17s0000g07440.t01
CDS Infomation	cds chromosome:12X:17:8383056:8387769:1 gene:VIT_17s0000g07440 gene_biotype:protein_coding transcript_biotype:protein_coding description:Replication protein A subunit [Source:UniProtKB/TrEMBL;Acc:F6GSY5]
Sequence	ATGGCGAAATCCATTACCCCAAATGGCATTTCCACTATTCTCTCAAACCCATCTCCGGAT TCTTCCACAGAACTCCCAGAAATCATCGTTCAAGTCATAGATCTCACGCCAATCGGAAAC AGATATAAATTTACAGCAAATGACGGAAAGATGAAGCTCAAAGCAATGTTTCCATCCAGT TTTTCATCTGAGATAAACTCTGGAAATATTCAAAACCTTGGTCTCATTCAAGTTATTGAT TACACCCTCAATGACATTCCGAGCAAGCAAGAGAAATATTTGATTGTGACAAAATGTGAG GCTGTCTCTCCTGCACTTGAAGTGGAATTCAAGACTGAGGTGAAAAGTGAAGAAACTGGA ATCCTGTTAAGGCCAAAACAAGTAGTTGAGATTCAGAGGGAGGTGAAAACGGAAGGAACT GGCATATTTTTGAAGCCAAAGCAAGAAATAGTTGCTAAATCAGCTGCTCAGATAGTAAAT GAACAGCATGGAAATATGGCTCCTGCTGCACGAATGGCCATGACAAGAAGGGTTCATCCT CTTGTTTCCTTGAATCCTTACCAAGGCAACTGGACGATAAAAGTCCGGCTTACAAACAAA GGAACCATGCGTACTTATAAGAATGCTAGAGGAGAAGGTTGTGTCTTCAATGTAGAGTTA ACAGATGAGGATGGTACACAAATCCAAGCAACAATGTTTAACGAAGCTGCAAGGAAGTTC TATGAAAAGTTCCAACTGGGGAAGGTCTATTACATATCAAAAGGAGCTCTAAAAGTAGCC AACAAGCAGTTTAAAACTGTACAAAATGATTATGAAATGACCCTGAATGAAAATTCAGAG GTTGAGGAGGCCAGTAATGAAGAAACTTTTATCCCTGAAGCAAAATTCAAATTTGTTGAG ATTGAAGAGTTGGGTCCTTATGTCAATGGGAAGGAGCTTGTAGATGTTATTGGAGTTGTT CAAAGTGTCTCTCCTACAATGAGCATACGAAGGAAGAGTAACAATGACATTGTTCCTAAG CGTGATATAACTATTGCGGACAAGACGAAGAAGACTGTTGTGGTCTCTTTGTGGAATGAT CATGCTACTAATGTAGGGCAGGAATTGTTGGATAATGCTGATAAATTTCCAATTGTTGCA ATTAAATCTCTTAAAGTTGGAGACTTCCAAGGTGTATCACTATCAACATTGAGTAAGAGT ATTGTACTGGTAAATCCAGATACACCTGAATCAAAAAAGTTGAGATCCTGGTATGATTCT GAAGGTAAAGGAGCTTCAATGGCTTCTATTGGGTCTGATATCAGTCCTTCATCTAAGGGT GGAGTCAAGTCCATGTACTATGACAGGGTTTCCCTTTCTCATGTAACCAGCAACCCATCT TTGGGTGAAGACAAGCCTTCCTTTTTTAGCATCAGGGCATACATAAGCTTCATCAAGCCT GATCAAACAATGTGGTACCGGGCTTGTAAGACATGCAACAAGAAAGTCACAGATGCTATT GGATCTGGGTATTGGTGTGAAGGATGCCAAAAGAATGATGATGAGTGCAGTTTAAGGTAC ATAATGGTAGTGAAAGTTTCAGATGCTAGTGGTGAAGCTTGGCTTTCTCTGTTCAATGAA CAAGCAGAGAGAATGTTTGGGTGCTCTGCTGATGAGCTTGATAAGCTGAAATCACAGGAG GGAGAAGAGAACCTATTCCAACAGAAATTGAAGGAAGCTATTTGGGTCCCTCATCTTTTC CGGATTAGTGTTGCACAGCATGAGTACATGAATGAGAAAAGGCAGAGGATAACAGCCAGG GCTGTTGTTCCAGTTGATTTTGCAGCTGAATCCAGATTATTGTTGGAGGAGATATCAAAG ATGAAGACTTCACAATAG

Peptide Sequence

PEP ID	VIT_17s0000g07440.t01
PEP Infomation	pep chromosome:12X:17:8383056:8387769:1 gene:VIT_17s0000g07440 transcript:VIT_17s0000g07440.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Replication protein A subunit [Source:UniProtKB/TrEMBL;Acc:F6GSY5]
Sequence	MAKSITPNGISTILSNPSPDSSTELPEIIVQVIDLTPIGNRYKFTANDGKMKLKAMFPSS FSSEINSGNIQNLGLIQVIDYTLNDIPSKQEKYLIVTKCEAVSPALEVEFKTEVKSEETG ILLRPKQVVEIQREVKTEGTGIFLKPKQEIVAKSAAQIVNEQHGNMAPAARMAMTRRVHP LVSLNPYQGNWTIKVRLTNKGTMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKF YEKFQLGKVYYISKGALKVANKQFKTVQNDYEMTLNENSEVEEASNEETFIPEAKFKFVE IEELGPYVNGKELVDVIGVVQSVSPTMSIRRKSNNDIVPKRDITIADKTKKTVVVSLWND HATNVGQELLDNADKFPIVAIKSLKVGDFQGVSLSTLSKSIVLVNPDTPESKKLRSWYDS EGKGASMASIGSDISPSSKGGVKSMYYDRVSLSHVTSNPSLGEDKPSFFSIRAYISFIKP DQTMWYRACKTCNKKVTDAIGSGYWCEGCQKNDDECSLRYIMVVKVSDASGEAWLSLFNE QAERMFGCSADELDKLKSQEGEENLFQQKLKEAIWVPHLFRISVAQHEYMNEKRQRITAR AVVPVDFAAESRLLLEEISKMKTSQ

Transcript Sequence

Transcript ID	VIT_17s0000g07440.t01
Transcript Infomation	cdna chromosome:12X:17:8383056:8387769:1 gene:VIT_17s0000g07440 gene_biotype:protein_coding transcript_biotype:protein_coding description:Replication protein A subunit [Source:UniProtKB/TrEMBL;Acc:F6GSY5]
Sequence	AGAGAGAGAGAGAGAGTGCTCCAGAGCGAGTTTTTAGAGAGAGGTGTGTTCCACAGATTT TTTAGAGAAAAAAACAATGGCGAAATCCATTACCCCAAATGGCATTTCCACTATTCTCTC AAACCCATCTCCGGATTCTTCCACAGAACTCCCAGAAATCATCGTTCAAGTCATAGATCT CACGCCAATCGGAAACAGATATAAATTTACAGCAAATGACGGAAAGATGAAGCTCAAAGC AATGTTTCCATCCAGTTTTTCATCTGAGATAAACTCTGGAAATATTCAAAACCTTGGTCT CATTCAAGTTATTGATTACACCCTCAATGACATTCCGAGCAAGCAAGAGAAATATTTGAT TGTGACAAAATGTGAGGCTGTCTCTCCTGCACTTGAAGTGGAATTCAAGACTGAGGTGAA AAGTGAAGAAACTGGAATCCTGTTAAGGCCAAAACAAGTAGTTGAGATTCAGAGGGAGGT GAAAACGGAAGGAACTGGCATATTTTTGAAGCCAAAGCAAGAAATAGTTGCTAAATCAGC TGCTCAGATAGTAAATGAACAGCATGGAAATATGGCTCCTGCTGCACGAATGGCCATGAC AAGAAGGGTTCATCCTCTTGTTTCCTTGAATCCTTACCAAGGCAACTGGACGATAAAAGT CCGGCTTACAAACAAAGGAACCATGCGTACTTATAAGAATGCTAGAGGAGAAGGTTGTGT CTTCAATGTAGAGTTAACAGATGAGGATGGTACACAAATCCAAGCAACAATGTTTAACGA AGCTGCAAGGAAGTTCTATGAAAAGTTCCAACTGGGGAAGGTCTATTACATATCAAAAGG AGCTCTAAAAGTAGCCAACAAGCAGTTTAAAACTGTACAAAATGATTATGAAATGACCCT GAATGAAAATTCAGAGGTTGAGGAGGCCAGTAATGAAGAAACTTTTATCCCTGAAGCAAA ATTCAAATTTGTTGAGATTGAAGAGTTGGGTCCTTATGTCAATGGGAAGGAGCTTGTAGA TGTTATTGGAGTTGTTCAAAGTGTCTCTCCTACAATGAGCATACGAAGGAAGAGTAACAA TGACATTGTTCCTAAGCGTGATATAACTATTGCGGACAAGACGAAGAAGACTGTTGTGGT CTCTTTGTGGAATGATCATGCTACTAATGTAGGGCAGGAATTGTTGGATAATGCTGATAA ATTTCCAATTGTTGCAATTAAATCTCTTAAAGTTGGAGACTTCCAAGGTGTATCACTATC AACATTGAGTAAGAGTATTGTACTGGTAAATCCAGATACACCTGAATCAAAAAAGTTGAG ATCCTGGTATGATTCTGAAGGTAAAGGAGCTTCAATGGCTTCTATTGGGTCTGATATCAG TCCTTCATCTAAGGGTGGAGTCAAGTCCATGTACTATGACAGGGTTTCCCTTTCTCATGT AACCAGCAACCCATCTTTGGGTGAAGACAAGCCTTCCTTTTTTAGCATCAGGGCATACAT AAGCTTCATCAAGCCTGATCAAACAATGTGGTACCGGGCTTGTAAGACATGCAACAAGAA AGTCACAGATGCTATTGGATCTGGGTATTGGTGTGAAGGATGCCAAAAGAATGATGATGA GTGCAGTTTAAGGTACATAATGGTAGTGAAAGTTTCAGATGCTAGTGGTGAAGCTTGGCT TTCTCTGTTCAATGAACAAGCAGAGAGAATGTTTGGGTGCTCTGCTGATGAGCTTGATAA GCTGAAATCACAGGAGGGAGAAGAGAACCTATTCCAACAGAAATTGAAGGAAGCTATTTG GGTCCCTCATCTTTTCCGGATTAGTGTTGCACAGCATGAGTACATGAATGAGAAAAGGCA GAGGATAACAGCCAGGGCTGTTGTTCCAGTTGATTTTGCAGCTGAATCCAGATTATTGTT GGAGGAGATATCAAAGATGAAGACTTCACAATAGGCTCCTTGGTTTATTTTGTTCTTTGG ATAACGGTAGTTAGGCAGTATGCCTTCAGTTCCCTCTATATCTTAAGACACATCCCATTG AATATAGAGGAAGCTTAATCCTAACTTGGAATGCACATACCATTTTTGTAATATATGTTT TGCAGACATACATGTGGTTTTGTTGCATTGTAGAAAAATCACTTAAAAAGCAGTTTTACG ACTTGGGTTTCCAT