Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g07370.t01
CDS Infomation

cds chromosome:12X:17:8239664:8241675:1 gene:VIT_17s0000g07370 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGAGAAACACTTGATCGTATTGGATTGAGCGGAGCAGTCATTAATGCAGCTGCTTCT
CTAGCCATGAAGGCTCACGATTCCACTCGCGAGCCATTTCTCCTCAAGAAACCCCGTGGC
TTATCCGTTGCTGTTGTTGCATTTGCTGGATCTTGGCTTCCCGATGATTGGTGTGCGGAG
ACACCTTTTGGAGAAACGACGATAGATGCTGGTACCTTTCCTTCGCTTAAAAGTTTAGGC
GATGACGGAGTCGCTCTGGTCAACGGGTCGTTTCTCCGGCGATTCAAGGCAATCTTAGGC
CAATCATCACTTGCCGAAAAGGTGAAAAAAGTAATTGGAGAGAAGAAGCGAGTTATTTTC
ACCGGCTACTCGTCGGGTGCTCCGGTGGCCATCCTGGCAACTCTATACCTCTTGGAGAAG
TCAGAGCCCAATCAGAGCCCACCCCGCTGCGTCACTTTCGGATCCCCCCTCGTCGGTGAT
CGGATCTTCGGTCATGCTGTCAGGCGGGAGAAATGGTCCGACCACTTCATTCATTTTGTT
ATGAGATACGATGTGATCCCTCGGATTATGCTTGGCCCTTCATCCACTGAGCACAAACAA
ATTCTCGATTTCTTCAATCCCGGATCTGAATCCTTCAGAAAACACACTGATTCTTCTTTA
GGTTTATATTCCAGCGTGATGAGGAATGCATCCATGGTTGCAAACTATGATGCCTGCAAT
TTCATGGGATGCAGAATCCCGGCGCTGGAAACTCTAAGGAACTTCATTGAGCTCAGCCCT
TATAGACCTTTCGGAACTTACATCTTCTGCAGTGGAAGTGGAAAGCTGGTTGTCGTAAGG
AACCCGAATGCAGTACTGCAGATACTGTTTTACTGTGCTCAGTGGAGCCAAGAAGAAGAT
GCAGAGGCTGCAAAAAAAGGCCTAAATGAACACTTGGACTACCAAAAGGAACTACAGAGC
TTAGGAAAGCAGAATGTAGTCTATCTAGACCATCTGGAAGAGCTTCCGGTGTCTTCTGAT
GGCAGTCCAGCCACAGTCAACACGACCTTGAATGACCTCGGCCTGAGCACACAAGCCATG
CTATGCCTTCAAGCTACAGGAGAGTTGGAGAAGCGAAAGTCAAGAAACCAGGATAAGATC
ATTAATGATTATAAGCAAAAGATTGAAGGTGAATTAAGAAAGCTGAGTGAGTATAAGGAA
AAGGCCGAGACTTGCGGACAGAGCTACTATGATTCCTTCAAGCTCCAAGAAAAACCAGAT
GCCTTCCATGCTAATGTGAGCAGGCTTGTGCTAGCTGGTTACTGGGATGAGATGATGGAA
ATGTTAAAAGCGTATGAACTTCCGGATGAATTTGAGAAGAGGCAAGACTTGATACAACTT
GGAACAAATTATCTCCGCATGGTTGAGCCTCTAGATATTGCGAACTTCTATCGACACGCC
AAGGATGAAGAGACAGGGTTCTACGTGAAAAAGGGGACTCGACCAAAACGATACCGATAC
ATCCAAAGTTGGCTCGAGTATGCTGAAAAGAAGCCATCTGGATCCCACTCAGAATCCTGT
TTCTGGGCTGAGGTAGAGGACCTCCGCATTAAAACTAGAAGCAACGGATCCTCTCCAGAA
ATTAAGCAGAAGGTTCAGCAACTGGGGCAAAATCTAATTAAATGGATTGATGATGAATCT
TTAGGCAAGGATGTGTTGTTGGAGAATTCCACCTTTGTTAAATGGTGGAAATCCCTTCCT
CCTGAGTATAAATCAGAACCCGAATCATCTCGCATTATGAAACTCATCCATGAGAAAGAT
TGA

Peptide Sequence

PEP ID

VIT_17s0000g07370.t01
PEP Infomation

pep chromosome:12X:17:8239664:8241675:1 gene:VIT_17s0000g07370 transcript:VIT_17s0000g07370.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGETLDRIGLSGAVINAAASLAMKAHDSTREPFLLKKPRGLSVAVVAFAGSWLPDDWCAE
TPFGETTIDAGTFPSLKSLGDDGVALVNGSFLRRFKAILGQSSLAEKVKKVIGEKKRVIF
TGYSSGAPVAILATLYLLEKSEPNQSPPRCVTFGSPLVGDRIFGHAVRREKWSDHFIHFV
MRYDVIPRIMLGPSSTEHKQILDFFNPGSESFRKHTDSSLGLYSSVMRNASMVANYDACN
FMGCRIPALETLRNFIELSPYRPFGTYIFCSGSGKLVVVRNPNAVLQILFYCAQWSQEED
AEAAKKGLNEHLDYQKELQSLGKQNVVYLDHLEELPVSSDGSPATVNTTLNDLGLSTQAM
LCLQATGELEKRKSRNQDKIINDYKQKIEGELRKLSEYKEKAETCGQSYYDSFKLQEKPD
AFHANVSRLVLAGYWDEMMEMLKAYELPDEFEKRQDLIQLGTNYLRMVEPLDIANFYRHA
KDEETGFYVKKGTRPKRYRYIQSWLEYAEKKPSGSHSESCFWAEVEDLRIKTRSNGSSPE
IKQKVQQLGQNLIKWIDDESLGKDVLLENSTFVKWWKSLPPEYKSEPESSRIMKLIHEKD

Transcript Sequence

Transcript ID

VIT_17s0000g07370.t01
Transcript Infomation

cdna chromosome:12X:17:8239664:8241675:1 gene:VIT_17s0000g07370 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CACAGAGAGAAAATTTGCATAGAGAGAATATGGGAGAAACACTTGATCGTATTGGATTGA
GCGGAGCAGTCATTAATGCAGCTGCTTCTCTAGCCATGAAGGCTCACGATTCCACTCGCG
AGCCATTTCTCCTCAAGAAACCCCGTGGCTTATCCGTTGCTGTTGTTGCATTTGCTGGAT
CTTGGCTTCCCGATGATTGGTGTGCGGAGACACCTTTTGGAGAAACGACGATAGATGCTG
GTACCTTTCCTTCGCTTAAAAGTTTAGGCGATGACGGAGTCGCTCTGGTCAACGGGTCGT
TTCTCCGGCGATTCAAGGCAATCTTAGGCCAATCATCACTTGCCGAAAAGGTGAAAAAAG
TAATTGGAGAGAAGAAGCGAGTTATTTTCACCGGCTACTCGTCGGGTGCTCCGGTGGCCA
TCCTGGCAACTCTATACCTCTTGGAGAAGTCAGAGCCCAATCAGAGCCCACCCCGCTGCG
TCACTTTCGGATCCCCCCTCGTCGGTGATCGGATCTTCGGTCATGCTGTCAGGCGGGAGA
AATGGTCCGACCACTTCATTCATTTTGTTATGAGATACGATGTGATCCCTCGGATTATGC
TTGGCCCTTCATCCACTGAGCACAAACAAATTCTCGATTTCTTCAATCCCGGATCTGAAT
CCTTCAGAAAACACACTGATTCTTCTTTAGGTTTATATTCCAGCGTGATGAGGAATGCAT
CCATGGTTGCAAACTATGATGCCTGCAATTTCATGGGATGCAGAATCCCGGCGCTGGAAA
CTCTAAGGAACTTCATTGAGCTCAGCCCTTATAGACCTTTCGGAACTTACATCTTCTGCA
GTGGAAGTGGAAAGCTGGTTGTCGTAAGGAACCCGAATGCAGTACTGCAGATACTGTTTT
ACTGTGCTCAGTGGAGCCAAGAAGAAGATGCAGAGGCTGCAAAAAAAGGCCTAAATGAAC
ACTTGGACTACCAAAAGGAACTACAGAGCTTAGGAAAGCAGAATGTAGTCTATCTAGACC
ATCTGGAAGAGCTTCCGGTGTCTTCTGATGGCAGTCCAGCCACAGTCAACACGACCTTGA
ATGACCTCGGCCTGAGCACACAAGCCATGCTATGCCTTCAAGCTACAGGAGAGTTGGAGA
AGCGAAAGTCAAGAAACCAGGATAAGATCATTAATGATTATAAGCAAAAGATTGAAGGTG
AATTAAGAAAGCTGAGTGAGTATAAGGAAAAGGCCGAGACTTGCGGACAGAGCTACTATG
ATTCCTTCAAGCTCCAAGAAAAACCAGATGCCTTCCATGCTAATGTGAGCAGGCTTGTGC
TAGCTGGTTACTGGGATGAGATGATGGAAATGTTAAAAGCGTATGAACTTCCGGATGAAT
TTGAGAAGAGGCAAGACTTGATACAACTTGGAACAAATTATCTCCGCATGGTTGAGCCTC
TAGATATTGCGAACTTCTATCGACACGCCAAGGATGAAGAGACAGGGTTCTACGTGAAAA
AGGGGACTCGACCAAAACGATACCGATACATCCAAAGTTGGCTCGAGTATGCTGAAAAGA
AGCCATCTGGATCCCACTCAGAATCCTGTTTCTGGGCTGAGGTAGAGGACCTCCGCATTA
AAACTAGAAGCAACGGATCCTCTCCAGAAATTAAGCAGAAGGTTCAGCAACTGGGGCAAA
ATCTAATTAAATGGATTGATGATGAATCTTTAGGCAAGGATGTGTTGTTGGAGAATTCCA
CCTTTGTTAAATGGTGGAAATCCCTTCCTCCTGAGTATAAATCAGAACCCGAATCATCTC
GCATTATGAAACTCATCCATGAGAAAGATTGA