Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g06880.t01
CDS Infomation

cds chromosome:12X:17:7531999:7538702:-1 gene:VIT_17s0000g06880 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGATTCCGCTTCTTCTTATTTCTTTTTCTTGCTACCCTCCCTGCGTTCTTGGCTCAA
GAATTTGAAGATGCAATAATTAAAGTTGATGGGGCTACAACAGTTGCTGAAACTGATGCT
AACTTCATCTGTGCTACTCTGGATTGGTGGCCTCATGATAAGTGTAACTACAACCACTGT
CCATGGGGATATTCATCTGTAATAAATATGGACTTGTCTCATCCTCTTTTTGCCAAGGCA
ATTGAAGCTTTTAAGCATTTGAGAATAAGAATTGGAGGTTCTTTGCAAGACCAAGTATTA
TATGATATCGGATCTTTGAGGTCCCCTTGCCATCCTTTTAGAAAGATGAATGATGGATTA
TTTGGATTTTCGAAGGGATGTTTACGCATGAGTAGGTGGGATGAGCTAAACCGCTTGTTC
AGTCAGACAGGAGTAATTCTGACATTTGGGTTGAATGCACTCTATGGGAGGTACCAGATT
AGAAAAGGCGCATGGGCCGGAGTTTGGGACTCAAGTAACACTCAGAACTTCATAAAGTAC
ACTATTTCCAAGGGATACCAGATTGATTCATGGGAATTTGGTAACGAGTTGAGTGGAAGT
GGAGTTGGTGCAAGCGTTAATGCTGAACAGTATGGGAAGGACTTAATCAACCTTAAAGCT
ATCATCAATAAGCTGTATAATAACTCGAATGTCAAACCATTACTTGTAGCACCAGGAGGA
TTCTATGAACAGGATTGGTATGCTAAGCTTCTTCAGGTTTCGGGTTCAAGCACAGTCAAT
GTTGTGACACATCATATCTATAATCTGGGTGCAGGTGTAGATCCCAATCTTGTGAGTAAG
ATACTGAATCCCCATTACTTGAGCAGGGTAGAAGAAACATTCAAGAGCCTTGACAAAACC
CTTCAAACCTGGGGCCCTTGGGCTTCTGCTTGGGTTGGAGAATCTGGTGGGGCTTATAAC
AGTGGTGGTCATCTGGTGTCTAACACCTTTGTAAACAGCTTTTGGTACTTAGATCAGCTT
GGAATGGCATCCAAGTACCACACTAAAGTTTATTGCAGGCAGACTTTGATTGGTGGAAAC
TATGGTCTCCTCAACACAACCACTTTAGTTCCCAACCCTGATTATTACAGCGCCCTTCTG
TGGCATCGACTCATGGGAAAAGGTGTACTTGCTGTTGATAGTACTGCCTCACCATTTTTA
CGCTCTTATGCCCATTGTTCAAAAGGGAAGGCAGGCATAACTTTACTCCTGATCAATTTA
AGCAACCAGACCACATTCCAAATCAATGTTGAGAACAGCATGAACCTCAACTTGTTTGTG
AAGAAGACAACCATGTACAGAGGAAGTGCTTTCATGCGTGGTCTCAAGAAATCAGCGTCA
TGGATCGGAAGTAAGGCAGATGAACAATTATTCAGAGAAGAGTATCATCTAACTCCAAAA
GATGGGTACCTCAGAAGCCAGACCATGGTTCTAAATGGGATGCCCTTGGAGCTTACTGAT
GATGGAAACATCCCAAGTTTGAACCCAGTACGCCTTAATCTGAATGCACCGATATTCATC
AATCCATTGTCCATTGCATTCATTGCATTCCCCAACTTTGATGCCCCAGCTTGTGCGTGA

Peptide Sequence

PEP ID

VIT_17s0000g06880.t01
PEP Infomation

pep chromosome:12X:17:7531999:7538702:-1 gene:VIT_17s0000g06880 transcript:VIT_17s0000g06880.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGFRFFLFLFLATLPAFLAQEFEDAIIKVDGATTVAETDANFICATLDWWPHDKCNYNHC
PWGYSSVINMDLSHPLFAKAIEAFKHLRIRIGGSLQDQVLYDIGSLRSPCHPFRKMNDGL
FGFSKGCLRMSRWDELNRLFSQTGVILTFGLNALYGRYQIRKGAWAGVWDSSNTQNFIKY
TISKGYQIDSWEFGNELSGSGVGASVNAEQYGKDLINLKAIINKLYNNSNVKPLLVAPGG
FYEQDWYAKLLQVSGSSTVNVVTHHIYNLGAGVDPNLVSKILNPHYLSRVEETFKSLDKT
LQTWGPWASAWVGESGGAYNSGGHLVSNTFVNSFWYLDQLGMASKYHTKVYCRQTLIGGN
YGLLNTTTLVPNPDYYSALLWHRLMGKGVLAVDSTASPFLRSYAHCSKGKAGITLLLINL
SNQTTFQINVENSMNLNLFVKKTTMYRGSAFMRGLKKSASWIGSKADEQLFREEYHLTPK
DGYLRSQTMVLNGMPLELTDDGNIPSLNPVRLNLNAPIFINPLSIAFIAFPNFDAPACA

Transcript Sequence

Transcript ID

VIT_17s0000g06880.t01
Transcript Infomation

cdna chromosome:12X:17:7531999:7538702:-1 gene:VIT_17s0000g06880 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGAAACGATAAGCTTCTAGTCTGAGCAGTCGATGTTTTGATGGGTTTTTTGTGGGAAGAG
TTGCTTCAGAATTGAGCCCGCTCAACCCTTGTCACTGTCGTTAATTGACTGAGTTGAGTT
AGTATTGAGGCTGGTTTGCTCGTTCCCCCAATGGGATTCCGCTTCTTCTTATTTCTTTTT
CTTGCTACCCTCCCTGCGTTCTTGGCTCAAGAATTTGAAGATGCAATAATTAAAGTTGAT
GGGGCTACAACAGTTGCTGAAACTGATGCTAACTTCATCTGTGCTACTCTGGATTGGTGG
CCTCATGATAAGTGTAACTACAACCACTGTCCATGGGGATATTCATCTGTAATAAATATG
GACTTGTCTCATCCTCTTTTTGCCAAGGCAATTGAAGCTTTTAAGCATTTGAGAATAAGA
ATTGGAGGTTCTTTGCAAGACCAAGTATTATATGATATCGGATCTTTGAGGTCCCCTTGC
CATCCTTTTAGAAAGATGAATGATGGATTATTTGGATTTTCGAAGGGATGTTTACGCATG
AGTAGGTGGGATGAGCTAAACCGCTTGTTCAGTCAGACAGGAGTAATTCTGACATTTGGG
TTGAATGCACTCTATGGGAGGTACCAGATTAGAAAAGGCGCATGGGCCGGAGTTTGGGAC
TCAAGTAACACTCAGAACTTCATAAAGTACACTATTTCCAAGGGATACCAGATTGATTCA
TGGGAATTTGGTAACGAGTTGAGTGGAAGTGGAGTTGGTGCAAGCGTTAATGCTGAACAG
TATGGGAAGGACTTAATCAACCTTAAAGCTATCATCAATAAGCTGTATAATAACTCGAAT
GTCAAACCATTACTTGTAGCACCAGGAGGATTCTATGAACAGGATTGGTATGCTAAGCTT
CTTCAGGTTTCGGGTTCAAGCACAGTCAATGTTGTGACACATCATATCTATAATCTGGGT
GCAGGTGTAGATCCCAATCTTGTGAGTAAGATACTGAATCCCCATTACTTGAGCAGGGTA
GAAGAAACATTCAAGAGCCTTGACAAAACCCTTCAAACCTGGGGCCCTTGGGCTTCTGCT
TGGGTTGGAGAATCTGGTGGGGCTTATAACAGTGGTGGTCATCTGGTGTCTAACACCTTT
GTAAACAGCTTTTGGTACTTAGATCAGCTTGGAATGGCATCCAAGTACCACACTAAAGTT
TATTGCAGGCAGACTTTGATTGGTGGAAACTATGGTCTCCTCAACACAACCACTTTAGTT
CCCAACCCTGATTATTACAGCGCCCTTCTGTGGCATCGACTCATGGGAAAAGGTGTACTT
GCTGTTGATAGTACTGCCTCACCATTTTTACGCTCTTATGCCCATTGTTCAAAAGGGAAG
GCAGGCATAACTTTACTCCTGATCAATTTAAGCAACCAGACCACATTCCAAATCAATGTT
GAGAACAGCATGAACCTCAACTTGTTTGTGAAGAAGACAACCATGTACAGAGGAAGTGCT
TTCATGCGTGGTCTCAAGAAATCAGCGTCATGGATCGGAAGTAAGGCAGATGAACAATTA
TTCAGAGAAGAGTATCATCTAACTCCAAAAGATGGGTACCTCAGAAGCCAGACCATGGTT
CTAAATGGGATGCCCTTGGAGCTTACTGATGATGGAAACATCCCAAGTTTGAACCCAGTA
CGCCTTAATCTGAATGCACCGATATTCATCAATCCATTGTCCATTGCATTCATTGCATTC
CCCAACTTTGATGCCCCAGCTTGTGCGTGATCCTTCATCCTTGTGTAAACTCACCTCTCA
AGCTATATATCTTACTAGGTCATGACTGCAGAAGCTAAGAGTTTGTATTAAGAATAAGAT
CAAGATCATTGTATGTAGAGCAAGTACACGGATATCTGTTGGGAACAAAACAAGAAACAA
TGAATCAATTGTAATTATCTATCTATCTATATATATATGTATTGTTAAAAAAATA