Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g06810.t01
CDS Infomation

cds chromosome:12X:17:7463712:7468674:1 gene:VIT_17s0000g06810 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGTACAGAAGCGTTCATTTGATGATGAGGAGTTATACGAGATTTCTTCTAAGCACCCC
AGACAATTAGAACATAATCATCATCTAATTTCATTTTTGGAATTTGTTCCTTTTGATGAT
CCTCTTCAGAAGCCTCGTGTTCAAGGTGAGGGAGAATTATTAAAATGTAAAACTGAAGGT
GATGAGAAGCTTCTCAGTGGCTTCTGTACTGATTTTCCAATAAGTGCTAAAGACACTGAA
ACCTTTATGCGTGGCTGCATTTCCACCTCATCATGGGCCACCAGCAGTACTAGTGAAGAT
GATGCCAGGTCAGAGGCACCAATTGATGTATCACTGTTTCCAGAATATTTTAGTTCTGAC
AGTCCAGTGAGGGCATCCAACGACTCTGATGACTACTATTTATCTCTTTTGGATTATCCT
CCCCGAAAATCTGTCCCCATTGGATCAGATCATCAAGTTGATGTTCCAGCATGGAGCCAG
GGTATCATGGATTCATTAGATTACTTAGAAACATCTGAACAAGTAATTTTCTCTCCACAA
GCTTCAGGCTTGGAACTCAGTGTTGGTAACATTGATGAGAAAAGGCTGATTGGGACATGT
GTAATGCCAATGCCCAAGTCAGAACCATTTTGCAACGATGCTGTAGTCGGAAATGGTAGA
ACTGATTGTAGCTGTCATGATAGGGGTTCTTACAGATGTGTAAGACAACATATTGCGGAA
GCAAGAGAGAAACTTAGAGGAACCCTTGGAGAGGAGAGGTTTGTAAAGCTGGGTTTCCAT
GACATGGGAGAGGAAGTTGCAGAGAAATGGAATGAAGAGGAAGAACAATTATTTCACGAG
GTTGTCTTCTCTAATCCAGTGTCATTGGGTAAGAATTTTTGGGACAATCTTTCCTTAGTC
TTCCCTTCCCGAACTACAAGGGAAATAGTCAGCTATTATTTTAACGTGTTCATGCTTCGA
AAACGGGCAGAACAGAACAGATATGACCCAGAGAACATTGACAGTGATAATGATGAGTGG
CCGGAGACTGATGATTATTGCAATGATGAACATGAAATGACAGAGGAAGATGAGGATTCT
GTTGTTGAATCCCCGATATATCAAGAGGATCCTAGTTATAATCCATGTCATGCAGATGAT
AAACGAAAATATGAGGATATTGGGGATGGAACTCATGGTGATAACGAGAATGTAAATTAT
GGTAGTGGGATGGACATCCTTGATATTTCAGAATCATGCACTGACAAGTTACTAAACAAT
TCTGGTTCTGATTCCATTTGTCAGCTTTCAGATGTTCCCTGGGATGGAAAGGGAGACCAT
GGCATCAAAGATGGCTCATGCACATCCTCCAATACAGGGGCTGACTCACAAAGGACCCAA
GCGAAGGCTGGCAATGGTGACCACTGGTATGCTTTGGAGCCCTGTGATGCTAAAGTATGG
GATGCTGGGTATGTGACTTGCTCCAAAACTAAAGTTGATTTGTTATCAACTTGCAGTATG
ATTGAAGAGGTTTTTGGAGCTGGTACTGGGACGTACAAGGGAGCAGATGGTCAGGGCTTG
ATTTAG

Peptide Sequence

PEP ID

VIT_17s0000g06810.t01
PEP Infomation

pep chromosome:12X:17:7463712:7468674:1 gene:VIT_17s0000g06810 transcript:VIT_17s0000g06810.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MVQKRSFDDEELYEISSKHPRQLEHNHHLISFLEFVPFDDPLQKPRVQGEGELLKCKTEG
DEKLLSGFCTDFPISAKDTETFMRGCISTSSWATSSTSEDDARSEAPIDVSLFPEYFSSD
SPVRASNDSDDYYLSLLDYPPRKSVPIGSDHQVDVPAWSQGIMDSLDYLETSEQVIFSPQ
ASGLELSVGNIDEKRLIGTCVMPMPKSEPFCNDAVVGNGRTDCSCHDRGSYRCVRQHIAE
AREKLRGTLGEERFVKLGFHDMGEEVAEKWNEEEEQLFHEVVFSNPVSLGKNFWDNLSLV
FPSRTTREIVSYYFNVFMLRKRAEQNRYDPENIDSDNDEWPETDDYCNDEHEMTEEDEDS
VVESPIYQEDPSYNPCHADDKRKYEDIGDGTHGDNENVNYGSGMDILDISESCTDKLLNN
SGSDSICQLSDVPWDGKGDHGIKDGSCTSSNTGADSQRTQAKAGNGDHWYALEPCDAKVW
DAGYVTCSKTKVDLLSTCSMIEEVFGAGTGTYKGADGQGLI

Transcript Sequence

Transcript ID

VIT_17s0000g06810.t01
Transcript Infomation

cdna chromosome:12X:17:7463712:7468674:1 gene:VIT_17s0000g06810 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATTTTGAAGATTTTGTTTAAAATTTTTGGATCGAGGGTTAGGGTTTCGATTGAATTGGGG
GTTTTGCTTCTCTTCTTTAATTGATCTGGGGAAAGATCAGATTTCATCGAGAAATAGAGT
TTTTGTTACTTTATTGTCATTAATTTTCTTAATTTTGGGGACTTTGTTGAAAATATTTTT
TTATCAGGATTAGGGTTTCAATCAAATTGGGGTTTTGCTTCTCTGCTTTAATTGGGTTGG
GGTAACCTCCAATTTTGTCTAGAAATAAGTTTCTATTTTTTGATTACTCATCAATCGAAG
GCTTCTTTTCCATTGGACGACGAATTTTTGGAGTTAAACATGGTACAGAAGCGTTCATTT
GATGATGAGGAGTTATACGAGATTTCTTCTAAGCACCCCAGACAATTAGAACATAATCAT
CATCTAATTTCATTTTTGGAATTTGTTCCTTTTGATGATCCTCTTCAGAAGCCTCGTGTT
CAAGGTGAGGGAGAATTATTAAAATGTAAAACTGAAGGTGATGAGAAGCTTCTCAGTGGC
TTCTGTACTGATTTTCCAATAAGTGCTAAAGACACTGAAACCTTTATGCGTGGCTGCATT
TCCACCTCATCATGGGCCACCAGCAGTACTAGTGAAGATGATGCCAGGTCAGAGGCACCA
ATTGATGTATCACTGTTTCCAGAATATTTTAGTTCTGACAGTCCAGTGAGGGCATCCAAC
GACTCTGATGACTACTATTTATCTCTTTTGGATTATCCTCCCCGAAAATCTGTCCCCATT
GGATCAGATCATCAAGTTGATGTTCCAGCATGGAGCCAGGGTATCATGGATTCATTAGAT
TACTTAGAAACATCTGAACAAGTAATTTTCTCTCCACAAGCTTCAGGCTTGGAACTCAGT
GTTGGTAACATTGATGAGAAAAGGCTGATTGGGACATGTGTAATGCCAATGCCCAAGTCA
GAACCATTTTGCAACGATGCTGTAGTCGGAAATGGTAGAACTGATTGTAGCTGTCATGAT
AGGGGTTCTTACAGATGTGTAAGACAACATATTGCGGAAGCAAGAGAGAAACTTAGAGGA
ACCCTTGGAGAGGAGAGGTTTGTAAAGCTGGGTTTCCATGACATGGGAGAGGAAGTTGCA
GAGAAATGGAATGAAGAGGAAGAACAATTATTTCACGAGGTTGTCTTCTCTAATCCAGTG
TCATTGGGTAAGAATTTTTGGGACAATCTTTCCTTAGTCTTCCCTTCCCGAACTACAAGG
GAAATAGTCAGCTATTATTTTAACGTGTTCATGCTTCGAAAACGGGCAGAACAGAACAGA
TATGACCCAGAGAACATTGACAGTGATAATGATGAGTGGCCGGAGACTGATGATTATTGC
AATGATGAACATGAAATGACAGAGGAAGATGAGGATTCTGTTGTTGAATCCCCGATATAT
CAAGAGGATCCTAGTTATAATCCATGTCATGCAGATGATAAACGAAAATATGAGGATATT
GGGGATGGAACTCATGGTGATAACGAGAATGTAAATTATGGTAGTGGGATGGACATCCTT
GATATTTCAGAATCATGCACTGACAAGTTACTAAACAATTCTGGTTCTGATTCCATTTGT
CAGCTTTCAGATGTTCCCTGGGATGGAAAGGGAGACCATGGCATCAAAGATGGCTCATGC
ACATCCTCCAATACAGGGGCTGACTCACAAAGGACCCAAGCGAAGGCTGGCAATGGTGAC
CACTGGTATGCTTTGGAGCCCTGTGATGCTAAAGTATGGGATGCTGGGTATGTGACTTGC
TCCAAAACTAAAGTTGATTTGTTATCAACTTGCAGTATGATTGAAGAGGTTTTTGGAGCT
GGTACTGGGACGTACAAGGGAGCAGATGGTCAGGGCTTGATTTAGTGTTTGCTTCATCAG
TTTTATCTTGCTTCCAAGACAATTTGGAAAGTTTGGGCGTCTTAGTACTTGCTTGTCAGA
TGAATCTACAAGAAAATTCCTTTTGTTCTTTTTCATAGAAAGTAGGGGAGTCACAATTTC
CTTTGTACATTCATATATATGGTGGTAGATGAAAACCCTACCTTCAATGTAAGATACTGT
TTTAGGAGAAGGTTGGTTTTCATGTGTATCTCCCATGGGATCTTCTTAGTTGTGAATTGT
GTGATTCTATTCCCACCTCAGTACAAAGCCCCCAGTGCTGTACTCTCGTTGTAGGTATCT
CTCTATTGGGAGGAGGGGGTATTAGAAGAAGAAATTCTTAATTGTTAGGGGGAATGGGGT
TTCTATTATGTAATCCTG