Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g06440.t01
CDS Infomation

cds chromosome:12X:17:7027348:7031531:-1 gene:VIT_17s0000g06440 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGGTTGAGAAGAAACACAGATGATGAACAATTGAGGCTGTCGGATCCGGAACATCAC
ACTGTTTCTCGACCCTTGGATAGGGAATGTGAGCAGAATCCAATGAGATTGATGGGGATC
TTGGTCGTTTGCTTGATGGTTGTTTCAGTTCTGTTTTCAGTGTCTGTGGTCCTTAGAGAC
CCACCATCTGATGGAGTTTGGGCTAGTGAAGAAACTAAGTTTCTTCAAGTAAATCCTAGG
AAAGATGCAGAAGATAATCTCTCATGGTCAGCCGAGGAACCTAAAGATAAACTGCTTGGC
GGCCTTCTTGATGCTGGATTCAATGAAAGATCTTGTCTCAGCAGGTACCAATCAGCCTTA
TATCGCAAAGAACTACTGCATAAACCTTCTTCTTACCTCCTCTCTAAGTTACGGAGTTAT
GAAGCTCTTCATAAACGATGTGGACCCTATACAGAATCCTACAACCGTACCTTGAAACAA
CTCCAGTTGGGCCAACATATGGAGCAATCAGATTGCAACTATTTGGTATGGATATCATTC
AGTGGCTTAGGCAACAGGATACTAACTCTAGCTTCGGCATTTCTTTATGCTATCCTCACA
AACAGGGTCCTACTTGTTGATCCTGGAGCTGACATGCCTGATCTCTTCTGTGAACCTTTT
CCCGAGGTTTCCTGGTTACTCCCCTTGGACTTTCCCCTTAAAAATGAGTTTAACAGCTTT
GATCAGAAATCCCCATTTTGTTATGGGAAAATGCTCAAGAATAAGACTTTGACAGATTCT
AGTTGGTCGATCCTGCCACCTTATGTGTATCTCCATCTAGTCCATGATTATGATGATCAC
GATAAGATGTTCTTCTGCAATCAAGATCAATCTTTTCTCCGAAAAATCCCTTGTTTAATT
ATCAAAACTGATAACTACTTTGTTCCATCTCTCTTCTTGATCCCTTCATTTGAGCAAGAA
CTCAGTAACCTGTTCCCAGTAAAGGGAACGGTTTTCCACTTCTTGGGCAGATACCTCTTC
CACCCCACAAATGTTGTATGGGGGCTTATCACCAGGTACTATCAAGCTTATTTAGCTAAA
GCAGATGAGACAATAGGCATCCAGATCAGAGTCTTTGACACTGGGATTGGTCCATTCCAA
CATGTATTAGATCAGATCATAGCTTGTACCATGACAGAGAATTTGCTGCCAGAAATCAAC
ATGAGGGAACCTGTCGTTAGTTCATATGGACATAAGAAGTCTAAAGCTGTACTCATGACA
TCTTTGAGCGCTGGATACTTTGAGAAAGTAAGGAACATGTATTGGGAACACCCAACTGTG
ACAGGGGAAGTGATAGGCGTTTATCAACCAAGTCATGAAGAATATCAACAAACTGAGAAG
CAGAATCACAACAGGAAGGCATGGGCAGAAATGTATCTACTGAGCTTGACTGATGTGTTG
GTCACTAGTTCATGGTCAACTTTTGGGTATGTGGCTCAGGGCCTTGGAGGATTAAAACCT
TGGATTCTCTACAAGCCTGAAAATCAGACTGCCCCAGATCCACCTTGTCGCCGAGCCATG
TCAATGGAGCCTTGTTTCCACGCCCCTCCCTTCTATGACTGCAAGGCAAAGAAGGGGGTT
GACACAGGCGCACTTGTTCCTCACGTGAGGCATTGTGAGGACATGAGCTGGGGTCTCAAA
CTGGTTGATGACAGCCAGGAACATGGGGTTGTGAGGACATGA

Peptide Sequence

PEP ID

VIT_17s0000g06440.t01
PEP Infomation

pep chromosome:12X:17:7027348:7031531:-1 gene:VIT_17s0000g06440 transcript:VIT_17s0000g06440.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MRLRRNTDDEQLRLSDPEHHTVSRPLDRECEQNPMRLMGILVVCLMVVSVLFSVSVVLRD
PPSDGVWASEETKFLQVNPRKDAEDNLSWSAEEPKDKLLGGLLDAGFNERSCLSRYQSAL
YRKELLHKPSSYLLSKLRSYEALHKRCGPYTESYNRTLKQLQLGQHMEQSDCNYLVWISF
SGLGNRILTLASAFLYAILTNRVLLVDPGADMPDLFCEPFPEVSWLLPLDFPLKNEFNSF
DQKSPFCYGKMLKNKTLTDSSWSILPPYVYLHLVHDYDDHDKMFFCNQDQSFLRKIPCLI
IKTDNYFVPSLFLIPSFEQELSNLFPVKGTVFHFLGRYLFHPTNVVWGLITRYYQAYLAK
ADETIGIQIRVFDTGIGPFQHVLDQIIACTMTENLLPEINMREPVVSSYGHKKSKAVLMT
SLSAGYFEKVRNMYWEHPTVTGEVIGVYQPSHEEYQQTEKQNHNRKAWAEMYLLSLTDVL
VTSSWSTFGYVAQGLGGLKPWILYKPENQTAPDPPCRRAMSMEPCFHAPPFYDCKAKKGV
DTGALVPHVRHCEDMSWGLKLVDDSQEHGVVRT

Transcript Sequence

Transcript ID

VIT_17s0000g06440.t01
Transcript Infomation

cdna chromosome:12X:17:7027348:7031531:-1 gene:VIT_17s0000g06440 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTTCTTCTTCCGCAACTGCTTCTCAGCAACACTCAGATCATTTTTTTGCAACGATTTCAG
ATCCGAATACCCATTTCTAACCCACCCATTTGCTGCATCGTGGAGCCGAACCGCTTCTGC
GCAACAACCAAATGTGGATTCTACACACGTGATGAGGTTGAGAAGAAACACAGATGATGA
ACAATTGAGGCTGTCGGATCCGGAACATCACACTGTTTCTCGACCCTTGGATAGGGAATG
TGAGCAGAATCCAATGAGATTGATGGGGATCTTGGTCGTTTGCTTGATGGTTGTTTCAGT
TCTGTTTTCAGTGTCTGTGGTCCTTAGAGACCCACCATCTGATGGAGTTTGGGCTAGTGA
AGAAACTAAGTTTCTTCAAGTAAATCCTAGGAAAGATGCAGAAGATAATCTCTCATGGTC
AGCCGAGGAACCTAAAGATAAACTGCTTGGCGGCCTTCTTGATGCTGGATTCAATGAAAG
ATCTTGTCTCAGCAGGTACCAATCAGCCTTATATCGCAAAGAACTACTGCATAAACCTTC
TTCTTACCTCCTCTCTAAGTTACGGAGTTATGAAGCTCTTCATAAACGATGTGGACCCTA
TACAGAATCCTACAACCGTACCTTGAAACAACTCCAGTTGGGCCAACATATGGAGCAATC
AGATTGCAACTATTTGGTATGGATATCATTCAGTGGCTTAGGCAACAGGATACTAACTCT
AGCTTCGGCATTTCTTTATGCTATCCTCACAAACAGGGTCCTACTTGTTGATCCTGGAGC
TGACATGCCTGATCTCTTCTGTGAACCTTTTCCCGAGGTTTCCTGGTTACTCCCCTTGGA
CTTTCCCCTTAAAAATGAGTTTAACAGCTTTGATCAGAAATCCCCATTTTGTTATGGGAA
AATGCTCAAGAATAAGACTTTGACAGATTCTAGTTGGTCGATCCTGCCACCTTATGTGTA
TCTCCATCTAGTCCATGATTATGATGATCACGATAAGATGTTCTTCTGCAATCAAGATCA
ATCTTTTCTCCGAAAAATCCCTTGTTTAATTATCAAAACTGATAACTACTTTGTTCCATC
TCTCTTCTTGATCCCTTCATTTGAGCAAGAACTCAGTAACCTGTTCCCAGTAAAGGGAAC
GGTTTTCCACTTCTTGGGCAGATACCTCTTCCACCCCACAAATGTTGTATGGGGGCTTAT
CACCAGGTACTATCAAGCTTATTTAGCTAAAGCAGATGAGACAATAGGCATCCAGATCAG
AGTCTTTGACACTGGGATTGGTCCATTCCAACATGTATTAGATCAGATCATAGCTTGTAC
CATGACAGAGAATTTGCTGCCAGAAATCAACATGAGGGAACCTGTCGTTAGTTCATATGG
ACATAAGAAGTCTAAAGCTGTACTCATGACATCTTTGAGCGCTGGATACTTTGAGAAAGT
AAGGAACATGTATTGGGAACACCCAACTGTGACAGGGGAAGTGATAGGCGTTTATCAACC
AAGTCATGAAGAATATCAACAAACTGAGAAGCAGAATCACAACAGGAAGGCATGGGCAGA
AATGTATCTACTGAGCTTGACTGATGTGTTGGTCACTAGTTCATGGTCAACTTTTGGGTA
TGTGGCTCAGGGCCTTGGAGGATTAAAACCTTGGATTCTCTACAAGCCTGAAAATCAGAC
TGCCCCAGATCCACCTTGTCGCCGAGCCATGTCAATGGAGCCTTGTTTCCACGCCCCTCC
CTTCTATGACTGCAAGGCAAAGAAGGGGGTTGACACAGGCGCACTTGTTCCTCACGTGAG
GCATTGTGAGGACATGAGCTGGGGTCTCAAACTGGTTGATGACAGCCAGGAACATGGGGT
TGTGAGGACATGAGCTGGGATCTTAAACTGGTTGATCACAGCACTGAGTTCTAGTTTGTT
GTTTAGTTTGAAGGAATGTCATTCAATTATTTTTCGAATATATACCCTGTTTTCCCATGC
AAATCATTTAGAAGTGTTACTATTAGTTGATAAAGGCATCAGTTGTTGCAGACATAGTGA
GATGTGTAAGATTCTTACCAAATCTCTCTCTCTCTCTCTCTTTCTGTTCTCTATGAGTAA
TGCATATCAC