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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g06360.t01
CDS Infomation

cds chromosome:12X:17:6888734:6889740:-1 gene:VIT_17s0000g06360 gene_biotype:protein_coding transcript_biotype:protein_coding description:Expansin [Source:UniProtKB/TrEMBL;Acc:F6GT69]
Sequence

ATGTCTCTTCTTGGGTTTCTGCTTGTGGGGTTATTCTCTCTGCTCTCATCTGTTCAAGGG
GATGCAGGTGGTTGGACTGATGCTCATGCCACTTTCTATGGAGGGGGTGATGCCTCTGGA
ACAATGGGTGGGGCTTGTGGTTATGGAAACTTATACAGCCAGGGATATGGGACCAACACT
GCAGCTTTGAGCACAGCCTTATTCAACAGTGGGTTGAGCTGTGGTGCTTGTTTCGAGATT
AGGTGTGCGAATGACCCAAGGTGGTGTCGTTCTGGCTCTATTACGGTCACAGCCACCAAC
TTCTGCCCTCCAAACAATGCCCTCCCAAACAATGCAGGAGGGTGGTGCAACCCTCCCCAA
CAACATTTTGACCTCTCTCAGCCTGTCTTTGAAAGGATTGCAGAGTACAGAGCTGGGATT
GTTCCAGTCTCCTACAGAAGGGTACCCTGCATCAAGAAAGGAGGCATCAGGTTCACCATG
AATGGCCATTCTTACTTCAACTTAGTACTGATATCCAACGTTGGAGGTGCTGGTGATGTC
CACAGTGTTTCCATCAAAGGGTCAAAAACAGGTTGGCAACCCATGTCTAGGAACTGGGGT
CAGAACTGGCAAAGCAACTCCTACCTCAACGGACAGAGCCTCTCCTTCAAGGTGACCTTA
AGCGATGGGCGAACCGCTGTCTCAAACAATGTTGTCCCTGCTGGCTGGTCCTTTGGCCAG
ACCTTTAGTGGGTCACAGTTCACCTAG

Peptide Sequence

PEP ID

VIT_17s0000g06360.t01
PEP Infomation

pep chromosome:12X:17:6888734:6889740:-1 gene:VIT_17s0000g06360 transcript:VIT_17s0000g06360.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Expansin [Source:UniProtKB/TrEMBL;Acc:F6GT69]
Sequence

MSLLGFLLVGLFSLLSSVQGDAGGWTDAHATFYGGGDASGTMGGACGYGNLYSQGYGTNT
AALSTALFNSGLSCGACFEIRCANDPRWCRSGSITVTATNFCPPNNALPNNAGGWCNPPQ
QHFDLSQPVFERIAEYRAGIVPVSYRRVPCIKKGGIRFTMNGHSYFNLVLISNVGGAGDV
HSVSIKGSKTGWQPMSRNWGQNWQSNSYLNGQSLSFKVTLSDGRTAVSNNVVPAGWSFGQ
TFSGSQFT

Transcript Sequence

Transcript ID

VIT_17s0000g06360.t01
Transcript Infomation

cdna chromosome:12X:17:6888734:6889740:-1 gene:VIT_17s0000g06360 gene_biotype:protein_coding transcript_biotype:protein_coding description:Expansin [Source:UniProtKB/TrEMBL;Acc:F6GT69]
Sequence

TCTCTATGCAGGAAAATGTCTCTTCTTGGGTTTCTGCTTGTGGGGTTATTCTCTCTGCTC
TCATCTGTTCAAGGGGATGCAGGTGGTTGGACTGATGCTCATGCCACTTTCTATGGAGGG
GGTGATGCCTCTGGAACAATGGGTGGGGCTTGTGGTTATGGAAACTTATACAGCCAGGGA
TATGGGACCAACACTGCAGCTTTGAGCACAGCCTTATTCAACAGTGGGTTGAGCTGTGGT
GCTTGTTTCGAGATTAGGTGTGCGAATGACCCAAGGTGGTGTCGTTCTGGCTCTATTACG
GTCACAGCCACCAACTTCTGCCCTCCAAACAATGCCCTCCCAAACAATGCAGGAGGGTGG
TGCAACCCTCCCCAACAACATTTTGACCTCTCTCAGCCTGTCTTTGAAAGGATTGCAGAG
TACAGAGCTGGGATTGTTCCAGTCTCCTACAGAAGGGTACCCTGCATCAAGAAAGGAGGC
ATCAGGTTCACCATGAATGGCCATTCTTACTTCAACTTAGTACTGATATCCAACGTTGGA
GGTGCTGGTGATGTCCACAGTGTTTCCATCAAAGGGTCAAAAACAGGTTGGCAACCCATG
TCTAGGAACTGGGGTCAGAACTGGCAAAGCAACTCCTACCTCAACGGACAGAGCCTCTCC
TTCAAGGTGACCTTAAGCGATGGGCGAACCGCTGTCTCAAACAATGTTGTCCCTGCTGGC
TGGTCCTTTGGCCAGACCTTTAGTGGGTCACAGTTCACCTAGAGCCCCAAA